RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 TM4SF4P48230 202 aa19.04■□□□□ 0.64
RAB40C-208ENST00000564703 CDK8P49336 464 aa19.04■□□□□ 0.64
RAB40C-208ENST00000564703 GABPAQ06546 454 aa19.04■□□□□ 0.64
RAB40C-208ENST00000564703 ZNF589Q86UQ0 364 aaPredicted RBP19.04■□□□□ 0.64
RAB40C-208ENST00000564703 CCDC17Q96LX7 622 aa19.04■□□□□ 0.64
RAB40C-208ENST00000564703 EPB41L4AQ9HCS5 686 aaPredicted RBP19.04■□□□□ 0.64
RAB40C-208ENST00000564703 MPHOSPH10O00566 681 aaKnown RBP19.03■□□□□ 0.64
RAB40C-208ENST00000564703 CXCL11O14625 94 aa19.03■□□□□ 0.64
RAB40C-208ENST00000564703 SHMT1P34896 483 aa19.03■□□□□ 0.64
RAB40C-208ENST00000564703 GJA5P36382 358 aa19.03■□□□□ 0.64
RAB40C-208ENST00000564703 PDE4BQ07343 736 aa19.03■□□□□ 0.64
RAB40C-208ENST00000564703 VPS53Q5VIR6 699 aa19.03■□□□□ 0.64
RAB40C-208ENST00000564703 C16orf86Q6ZW13 317 aa19.03■□□□□ 0.64
RAB40C-208ENST00000564703 ZNF444Q8N0Y2 327 aaPredicted RBP19.03■□□□□ 0.64
RAB40C-208ENST00000564703 STK11IPQ8N1F8 1099 aa19.03■□□□□ 0.64
RAB40C-208ENST00000564703 WBP1LQ9NX94 342 aa19.03■□□□□ 0.64
RAB40C-208ENST00000564703 RAD50Q92878 1312 aa19.02■□□□□ 0.64
RAB40C-208ENST00000564703 CA12O43570 354 aa19.02■□□□□ 0.64
RAB40C-208ENST00000564703 ALDH1A1P00352 501 aa19.02■□□□□ 0.64
RAB40C-208ENST00000564703 GH2P01242 217 aa19.02■□□□□ 0.64
RAB40C-208ENST00000564703 FGAP02671 866 aa19.02■□□□□ 0.64
RAB40C-208ENST00000564703 PPARAQ07869 468 aa19.02■□□□□ 0.64
RAB40C-208ENST00000564703 RRP1BQ14684 758 aaKnown RBP19.02■□□□□ 0.64
RAB40C-208ENST00000564703 KIAA1211Q6ZU35 1233 aa19.02■□□□□ 0.64
RAB40C-208ENST00000564703 CTNNA3Q9UI47 895 aa19.02■□□□□ 0.64
RAB40C-208ENST00000564703 OTOFQ9HC10 1997 aa19.01■□□□□ 0.63
RAB40C-208ENST00000564703 CCL15-CCL14A0A0B4J2E2 113 aa19.01■□□□□ 0.63
RAB40C-208ENST00000564703 EVX2Q03828 476 aa19.01■□□□□ 0.63
RAB40C-208ENST00000564703 SPP2Q13103 211 aa19.01■□□□□ 0.63
RAB40C-208ENST00000564703 RAB3GAP1Q15042 981 aa19.01■□□□□ 0.63
RAB40C-208ENST00000564703 CCL15Q16663 113 aa19.01■□□□□ 0.63
RAB40C-208ENST00000564703 SLC44A5Q8NCS7 719 aa19.01■□□□□ 0.63
RAB40C-208ENST00000564703 ZNF280CQ8ND82 737 aa19.01■□□□□ 0.63
RAB40C-208ENST00000564703 DSCC1Q9BVC3 393 aa19.01■□□□□ 0.63
RAB40C-208ENST00000564703 ZBTB21Q9ULJ3 1066 aa19.01■□□□□ 0.63
RAB40C-208ENST00000564703 AFG3L2Q9Y4W6 797 aa19.01■□□□□ 0.63
RAB40C-208ENST00000564703 TRIM75PA6NK02 468 aa19■□□□□ 0.63
RAB40C-208ENST00000564703 FASTKD5Q7L8L6 764 aaKnown RBP19■□□□□ 0.63
RAB40C-208ENST00000564703 MS4A4AQ96JQ5 239 aa19■□□□□ 0.63
RAB40C-208ENST00000564703 KCNH4Q9UQ05 1017 aa19■□□□□ 0.63
RAB40C-208ENST00000564703 TESPA1A2RU30 521 aaPredicted RBP18.99■□□□□ 0.63
RAB40C-208ENST00000564703 ZNF213O14771 459 aa18.99■□□□□ 0.63
RAB40C-208ENST00000564703 TRPA1O75762 1119 aa18.99■□□□□ 0.63
RAB40C-208ENST00000564703 HSPA1AP0DMV8 641 aaKnown RBP18.99■□□□□ 0.63
RAB40C-208ENST00000564703 HSPA1BP0DMV9 641 aaKnown RBP18.99■□□□□ 0.63
RAB40C-208ENST00000564703 TMEM179Q6ZVK1 233 aa18.99■□□□□ 0.63
RAB40C-208ENST00000564703 IFNL1Q8IU54 200 aa18.99■□□□□ 0.63
RAB40C-208ENST00000564703 WDR18Q9BV38 432 aa18.99■□□□□ 0.63
RAB40C-208ENST00000564703 SIPA1L1O43166 1804 aa18.99■□□□□ 0.63
RAB40C-208ENST00000564703 C19orf81C9J6K1 198 aa18.98■□□□□ 0.63
RAB40C-208ENST00000564703 USP17L10C9JJH3 530 aa18.98■□□□□ 0.63
RAB40C-208ENST00000564703 SMIM22K7EJ46 135 aa18.98■□□□□ 0.63
RAB40C-208ENST00000564703 FOXP2O15409 715 aa18.98■□□□□ 0.63
RAB40C-208ENST00000564703 SGSM2O43147 1006 aa18.98■□□□□ 0.63
RAB40C-208ENST00000564703 CDC45O75419 566 aa18.98■□□□□ 0.63
RAB40C-208ENST00000564703 JAG1P78504 1218 aa18.98■□□□□ 0.63
RAB40C-208ENST00000564703 CTDSPL2Q05D32 466 aa18.98■□□□□ 0.63
RAB40C-208ENST00000564703 CCDC84Q86UT8 332 aaPredicted RBP18.98■□□□□ 0.63
RAB40C-208ENST00000564703 TOMM22Q9NS69 142 aa18.98■□□□□ 0.63
RAB40C-208ENST00000564703 RNF186Q9NXI6 227 aa18.98■□□□□ 0.63
RAB40C-208ENST00000564703 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.98■□□□□ 0.63
RAB40C-208ENST00000564703 ANAPC4Q9UJX5 808 aa18.98■□□□□ 0.63
RAB40C-208ENST00000564703 DOCK1Q14185 1865 aa18.98■□□□□ 0.63
RAB40C-208ENST00000564703 SEPT2Q15019 361 aa18.97■□□□□ 0.63
RAB40C-208ENST00000564703 IMMTQ16891 758 aaKnown RBP18.97■□□□□ 0.63
RAB40C-208ENST00000564703 GADL1Q6ZQY3 521 aa18.97■□□□□ 0.63
RAB40C-208ENST00000564703 BRI3BPQ8WY22 251 aa18.97■□□□□ 0.63
RAB40C-208ENST00000564703 FEZ1Q99689 392 aa18.97■□□□□ 0.63
RAB40C-208ENST00000564703 TMOD4Q9NZQ9 345 aa18.97■□□□□ 0.63
RAB40C-208ENST00000564703 ZMYM6O95789 1325 aa18.97■□□□□ 0.63
RAB40C-208ENST00000564703 PRDM1O75626 825 aa18.96■□□□□ 0.63
RAB40C-208ENST00000564703 AKR1B1P15121 316 aa18.96■□□□□ 0.63
RAB40C-208ENST00000564703 MFSD6Q6ZSS7 791 aa18.96■□□□□ 0.63
RAB40C-208ENST00000564703 ESYT1Q9BSJ8 1104 aa18.96■□□□□ 0.63
RAB40C-208ENST00000564703 RNF41Q9H4P4 317 aaPredicted RBP18.96■□□□□ 0.63
RAB40C-208ENST00000564703 KANSL2Q9H9L4 492 aa18.96■□□□□ 0.63
RAB40C-208ENST00000564703 SAGE1Q9NXZ1 904 aa18.96■□□□□ 0.63
RAB40C-208ENST00000564703 DDX60LQ5H9U9 1706 aaKnown RBP18.96■□□□□ 0.63
RAB40C-208ENST00000564703 ROBO3Q96MS0 1386 aa18.95■□□□□ 0.62
RAB40C-208ENST00000564703 CEP350Q5VT06 3117 aa18.95■□□□□ 0.62
RAB40C-208ENST00000564703 A0A0G2JLL6 359 aaPredicted RBP18.95■□□□□ 0.62
RAB40C-208ENST00000564703 TSPY3P0CV98 308 aa18.95■□□□□ 0.62
RAB40C-208ENST00000564703 TSPY8P0CW00 308 aa18.95■□□□□ 0.62
RAB40C-208ENST00000564703 RASA1P20936 1047 aa18.95■□□□□ 0.62
RAB40C-208ENST00000564703 CTCFP49711 727 aaPredicted RBP18.95■□□□□ 0.62
RAB40C-208ENST00000564703 BACE1P56817 501 aa18.95■□□□□ 0.62
RAB40C-208ENST00000564703 HAND2P61296 217 aa18.95■□□□□ 0.62
RAB40C-208ENST00000564703 SHROOM1Q2M3G4 852 aaPredicted RBP18.95■□□□□ 0.62
RAB40C-208ENST00000564703 PRRT2Q7Z6L0 340 aaPredicted RBP18.95■□□□□ 0.62
RAB40C-208ENST00000564703 PTPN18Q99952 460 aa18.95■□□□□ 0.62
RAB40C-208ENST00000564703 ARHGEF10LQ9HCE6 1279 aa18.95■□□□□ 0.62
RAB40C-208ENST00000564703 U3KPZ7 1027 aaPredicted RBP18.95■□□□□ 0.62
RAB40C-208ENST00000564703 MYH8P13535 1937 aa18.95■□□□□ 0.62
RAB40C-208ENST00000564703 ATAD5Q96QE3 1844 aa18.95■□□□□ 0.62
RAB40C-208ENST00000564703 BTBD19C9JJ37 291 aa18.94■□□□□ 0.62
RAB40C-208ENST00000564703 IGF2BP3O00425 579 aaKnown RBP eCLIP18.94■□□□□ 0.62
RAB40C-208ENST00000564703 RANBP6O60518 1105 aaKnown RBP18.94■□□□□ 0.62
RAB40C-208ENST00000564703 PCP11498 1178 aaKnown RBP18.94■□□□□ 0.62
RAB40C-208ENST00000564703 USP14P54578 494 aa18.94■□□□□ 0.62
RAB40C-208ENST00000564703 HMGCS2P54868 508 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms