RNA–Protein interactions for RNA: ENST00000560509.5

BLM-208, Transcript of Bloom syndrome RecQ like helicase, humanhuman

TSL 1 (best) BASIC

Gene BLM, Length 3,966 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BLM-208ENST00000560509 SMCR8Q8TEV9 937 aaPredicted RBP4.28□□□□□ -1.72
BLM-208ENST00000560509 TBC1D22AQ8WUA7 517 aa4.28□□□□□ -1.72
BLM-208ENST00000560509 SLC35B4Q969S0 331 aa4.28□□□□□ -1.72
BLM-208ENST00000560509 SIRPGQ9P1W8 387 aa4.28□□□□□ -1.72
BLM-208ENST00000560509 TTF2Q9UNY4 1162 aaKnown RBP4.28□□□□□ -1.72
BLM-208ENST00000560509 RRP7AQ9Y3A4 280 aaKnown RBP4.28□□□□□ -1.72
BLM-208ENST00000560509 MAPK8IP3Q9UPT6 1336 aa4.28□□□□□ -1.72
BLM-208ENST00000560509 OVOS2A0A0J9YW53 1432 aa4.28□□□□□ -1.72
BLM-208ENST00000560509 OVOS2Q6IE36 1432 aa4.28□□□□□ -1.72
BLM-208ENST00000560509 TMEM110-MUSTN1A8MSY1 372 aa4.28□□□□□ -1.72
BLM-208ENST00000560509 EIF3FO00303 357 aaPredicted RBP4.28□□□□□ -1.72
BLM-208ENST00000560509 PES1O00541 588 aaKnown RBP4.28□□□□□ -1.72
BLM-208ENST00000560509 FOXD2O60548 495 aaPredicted RBP4.28□□□□□ -1.72
BLM-208ENST00000560509 NR1I2O75469 434 aa4.28□□□□□ -1.72
BLM-208ENST00000560509 YBX3P16989 372 aaKnown RBP eCLIP4.28□□□□□ -1.721e-7■■■■□ 23.9
BLM-208ENST00000560509 FKBP4Q02790 459 aaKnown RBP eCLIP4.28□□□□□ -1.72
BLM-208ENST00000560509 TBC1D8BQ0IIM8 1120 aa4.28□□□□□ -1.72
BLM-208ENST00000560509 TTC19Q6DKK2 380 aaPredicted RBP4.28□□□□□ -1.72
BLM-208ENST00000560509 ALKBH2Q6NS38 261 aa4.28□□□□□ -1.72
BLM-208ENST00000560509 SLC4A10Q6U841 1118 aa4.28□□□□□ -1.72
BLM-208ENST00000560509 TDRD7Q8NHU6 1098 aaKnown RBP4.28□□□□□ -1.72
BLM-208ENST00000560509 ALG2Q9H553 416 aa4.28□□□□□ -1.72
BLM-208ENST00000560509 DMGDHQ9UI17 866 aaKnown RBP4.28□□□□□ -1.72
BLM-208ENST00000560509 MCM8Q9UJA3 840 aa4.28□□□□□ -1.72
BLM-208ENST00000560509 MAPK8IP1Q9UQF2 711 aa4.28□□□□□ -1.72
BLM-208ENST00000560509 MRPL42Q9Y6G3 142 aaKnown RBP4.28□□□□□ -1.72
BLM-208ENST00000560509 C1orf167Q5SNV9 1468 aa4.28□□□□□ -1.73
BLM-208ENST00000560509 ABCC4O15439 1325 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 ZBTB7BO15156 539 aaPredicted RBP4.27□□□□□ -1.73
BLM-208ENST00000560509 IL13P35225 146 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 PDIA5Q14554 519 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 AKNAD1Q5T1N1 836 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 HSCBQ8IWL3 235 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 SSH1Q8WYL5 1049 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 JARID2Q92833 1246 aaPredicted RBP4.27□□□□□ -1.73
BLM-208ENST00000560509 CDK5RAP3Q96JB5 506 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 PANK2Q9BZ23 570 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.27□□□□□ -1.73
BLM-208ENST00000560509 ENAMQ9NRM1 1142 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 ZNF446Q9NWS9 450 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 ITM2BQ9Y287 266 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 DDX49Q9Y6V7 483 aaKnown RBP4.27□□□□□ -1.73
BLM-208ENST00000560509 C10orf71Q711Q0 1435 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 XBP1P17861 261 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 NAP1L1P55209 391 aaKnown RBP4.27□□□□□ -1.73
BLM-208ENST00000560509 NUCB1Q02818 461 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 RBL2Q08999 1139 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 SWI5Q1ZZU3 235 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 SLC4A8Q2Y0W8 1093 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 SLFNL1Q499Z3 407 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 FAM182BQ5T319 152 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 MILR1Q7Z6M3 343 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 DDX12PQ92771 950 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 PDGFDQ9GZP0 370 aaPredicted RBP4.27□□□□□ -1.73
BLM-208ENST00000560509 NUCKS1Q9H1E3 243 aaKnown RBP4.27□□□□□ -1.73
BLM-208ENST00000560509 POLKQ9UBT6 870 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 ALG1L2C9J202 215 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 CA12O43570 354 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 MYL3P08590 195 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 TNNT1P13805 278 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 ALFQ53S48 1182 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 ANKRD45Q5TZF3 282 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 AGAP9Q5VTM2 703 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 LRCH2Q5VUJ6 765 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 CLEC17AQ6ZS10 378 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 TBC1D9Q6ZT07 1266 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 RBSNQ9H1K0 784 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 NEUROD4Q9HD90 331 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 CHCHD3Q9NX63 227 aaKnown RBP4.27□□□□□ -1.73
BLM-208ENST00000560509 TMOD4Q9NZQ9 345 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 NOD1Q9Y239 953 aa4.27□□□□□ -1.73
BLM-208ENST00000560509 RGPD8O14715 1765 aaPredicted RBP4.26□□□□□ -1.73
BLM-208ENST00000560509 CRB1P82279 1406 aa4.26□□□□□ -1.73
BLM-208ENST00000560509 SPTLC1O15269 473 aa4.26□□□□□ -1.73
BLM-208ENST00000560509 MAP3K7O43318 606 aa4.26□□□□□ -1.73
BLM-208ENST00000560509 DIAPH1O60610 1272 aaKnown RBP4.26□□□□□ -1.73
BLM-208ENST00000560509 ICMTO60725 284 aa4.26□□□□□ -1.73
BLM-208ENST00000560509 HIP1RO75146 1068 aa4.26□□□□□ -1.73
BLM-208ENST00000560509 BPIFB3P59826 476 aa4.26□□□□□ -1.73
BLM-208ENST00000560509 RABL6Q3YEC7 729 aaPredicted RBP4.26□□□□□ -1.73
BLM-208ENST00000560509 SULT6B1Q6IMI4 303 aa4.26□□□□□ -1.73
BLM-208ENST00000560509 IQCEQ6IPM2 695 aa4.26□□□□□ -1.73
BLM-208ENST00000560509 CPXCR1Q8N123 301 aa4.26□□□□□ -1.73
BLM-208ENST00000560509 KCNH5Q8NCM2 988 aa4.26□□□□□ -1.73
BLM-208ENST00000560509 RAPGEF4Q8WZA2 1011 aa4.26□□□□□ -1.73
BLM-208ENST00000560509 TSR2Q969E8 191 aaKnown RBP4.26□□□□□ -1.73
BLM-208ENST00000560509 ERP27Q96DN0 273 aa4.26□□□□□ -1.73
BLM-208ENST00000560509 PHACTR3Q96KR7 559 aa4.26□□□□□ -1.73
BLM-208ENST00000560509 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.26□□□□□ -1.73
BLM-208ENST00000560509 SENP2Q9HC62 589 aa4.26□□□□□ -1.73
BLM-208ENST00000560509 KMT5AQ9NQR1 393 aa4.26□□□□□ -1.73
BLM-208ENST00000560509 SLC30A1Q9Y6M5 507 aa4.26□□□□□ -1.73
BLM-208ENST00000560509 USP31Q70CQ4 1352 aa4.26□□□□□ -1.73
BLM-208ENST00000560509 EDC4Q6P2E9 1401 aaKnown RBP4.26□□□□□ -1.73
BLM-208ENST00000560509 ATRXP46100 2492 aa4.26□□□□□ -1.73
BLM-208ENST00000560509 FAM196BA6NMK8 535 aa4.26□□□□□ -1.73
BLM-208ENST00000560509 VAMP4O75379 141 aa4.26□□□□□ -1.73
BLM-208ENST00000560509 OFD1O75665 1012 aa4.26□□□□□ -1.73
BLM-208ENST00000560509 FAM13AO94988 1023 aa4.26□□□□□ -1.73
BLM-208ENST00000560509 TPM3P06753 285 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms