RNA–Protein interactions for RNA: ENST00000560379.1

USP8-210, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-210ENST00000560379 IREB2P48200 963 aaKnown RBP7.98□□□□□ -1.13
USP8-210ENST00000560379 NASPP49321 788 aaPredicted RBP7.98□□□□□ -1.13
USP8-210ENST00000560379 RALBP1Q15311 655 aa7.98□□□□□ -1.13
USP8-210ENST00000560379 FILIP1Q7Z7B0 1213 aa7.98□□□□□ -1.13
USP8-210ENST00000560379 KIAA0825Q8IV33 1275 aa7.98□□□□□ -1.13
USP8-210ENST00000560379 SMC5Q8IY18 1101 aa7.98□□□□□ -1.13
USP8-210ENST00000560379 THEMISQ8N1K5 641 aaPredicted RBP7.98□□□□□ -1.13
USP8-210ENST00000560379 TMTC2Q8N394 836 aa7.98□□□□□ -1.13
USP8-210ENST00000560379 GPATCH11Q8N954 259 aa7.98□□□□□ -1.13
USP8-210ENST00000560379 SNX29Q8TEQ0 813 aa7.98□□□□□ -1.13
USP8-210ENST00000560379 RNPC3Q96LT9 517 aaKnown RBP7.98□□□□□ -1.13
USP8-210ENST00000560379 SRPK1Q96SB4 655 aaKnown RBP7.98□□□□□ -1.13
USP8-210ENST00000560379 BCO2Q9BYV7 579 aa7.98□□□□□ -1.13
USP8-210ENST00000560379 UBA5Q9GZZ9 404 aa7.98□□□□□ -1.13
USP8-210ENST00000560379 NPHS2Q9NP85 383 aa7.98□□□□□ -1.13
USP8-210ENST00000560379 SIRPGQ9P1W8 387 aa7.98□□□□□ -1.13
USP8-210ENST00000560379 COL4A3BPQ9Y5P4 624 aa7.98□□□□□ -1.13
USP8-210ENST00000560379 NEXMIFQ5QGS0 1516 aa7.98□□□□□ -1.13
USP8-210ENST00000560379 SETBP1Q9Y6X0 1596 aa7.97□□□□□ -1.13
USP8-210ENST00000560379 NPHP4O75161 1426 aaPredicted RBP7.97□□□□□ -1.13
USP8-210ENST00000560379 MAP3K6O95382 1288 aa7.97□□□□□ -1.13
USP8-210ENST00000560379 MAP4K4O95819 1239 aaPredicted RBP7.97□□□□□ -1.13
USP8-210ENST00000560379 ETFBP38117 255 aa7.97□□□□□ -1.13
USP8-210ENST00000560379 HSPA2P54652 639 aa7.97□□□□□ -1.13
USP8-210ENST00000560379 MLLT1Q03111 559 aaPredicted RBP7.97□□□□□ -1.13
USP8-210ENST00000560379 XKR5Q6UX68 686 aa7.97□□□□□ -1.13
USP8-210ENST00000560379 ANKS3Q6ZW76 656 aa7.97□□□□□ -1.13
USP8-210ENST00000560379 APBB1IPQ7Z5R6 666 aaPredicted RBP7.97□□□□□ -1.13
USP8-210ENST00000560379 PNMA5Q96PV4 448 aa7.97□□□□□ -1.13
USP8-210ENST00000560379 IFT57Q9NWB7 429 aa7.97□□□□□ -1.13
USP8-210ENST00000560379 FRRS1LQ9P0K9 344 aa7.97□□□□□ -1.13
USP8-210ENST00000560379 ADAMTS1Q9UHI8 967 aa7.97□□□□□ -1.13
USP8-210ENST00000560379 NWD1Q149M9 1564 aa7.97□□□□□ -1.13
USP8-210ENST00000560379 LAMC1P11047 1609 aa7.96□□□□□ -1.13
USP8-210ENST00000560379 IDH3AP50213 366 aa7.96□□□□□ -1.14
USP8-210ENST00000560379 IDI1Q13907 227 aa7.96□□□□□ -1.14
USP8-210ENST00000560379 HIF1AQ16665 826 aa7.96□□□□□ -1.14
USP8-210ENST00000560379 DHX32Q7L7V1 743 aaKnown RBP7.96□□□□□ -1.14
USP8-210ENST00000560379 KRT25Q7Z3Z0 450 aa7.96□□□□□ -1.14
USP8-210ENST00000560379 ZNF438Q7Z4V0 828 aa7.96□□□□□ -1.14
USP8-210ENST00000560379 DTWD1Q8N5C7 304 aa7.96□□□□□ -1.14
USP8-210ENST00000560379 TRPM4Q8TD43 1214 aa7.96□□□□□ -1.14
USP8-210ENST00000560379 MPHOSPH9Q99550 1183 aa7.96□□□□□ -1.14
USP8-210ENST00000560379 RSRP1Q9BUV0 290 aa7.96□□□□□ -1.14
USP8-210ENST00000560379 NOC4LQ9BVI4 516 aaKnown RBP7.96□□□□□ -1.14
USP8-210ENST00000560379 TERF2IPQ9NYB0 399 aa7.96□□□□□ -1.14
USP8-210ENST00000560379 EFR3BQ9Y2G0 817 aa7.96□□□□□ -1.14
USP8-210ENST00000560379 MRVI1Q9Y6F6 885 aa7.96□□□□□ -1.14
USP8-210ENST00000560379 SPATA31E1Q6ZUB1 1445 aa7.95□□□□□ -1.14
USP8-210ENST00000560379 RIMS2Q9UQ26 1411 aa7.95□□□□□ -1.14
USP8-210ENST00000560379 IQSEC2Q5JU85 1478 aa7.95□□□□□ -1.14
USP8-210ENST00000560379 CPS1P31327 1500 aa7.95□□□□□ -1.14
USP8-210ENST00000560379 HMGB1P1B2RPK0 211 aaPredicted RBP7.95□□□□□ -1.14
USP8-210ENST00000560379 PHACTR2O75167 634 aa7.95□□□□□ -1.14
USP8-210ENST00000560379 GADD45BO75293 160 aaPredicted RBP7.95□□□□□ -1.14
USP8-210ENST00000560379 POLR3DP05423 398 aaPredicted RBP7.95□□□□□ -1.14
USP8-210ENST00000560379 TARSP26639 723 aaKnown RBP7.95□□□□□ -1.14
USP8-210ENST00000560379 TRIM55Q9BYV6 548 aa7.95□□□□□ -1.14
USP8-210ENST00000560379 PCDH12Q9NPG4 1184 aa7.95□□□□□ -1.14
USP8-210ENST00000560379 RNF112Q9ULX5 631 aa7.95□□□□□ -1.14
USP8-210ENST00000560379 TTF2Q9UNY4 1162 aaKnown RBP7.95□□□□□ -1.14
USP8-210ENST00000560379 USP20Q9Y2K6 914 aa7.95□□□□□ -1.14
USP8-210ENST00000560379 NRXN3Q9Y4C0 1643 aa7.95□□□□□ -1.14
USP8-210ENST00000560379 PLEKHG1Q9ULL1 1385 aa7.95□□□□□ -1.14
USP8-210ENST00000560379 MYOM2P54296 1465 aa7.94□□□□□ -1.14
USP8-210ENST00000560379 F6X3S4 739 aa7.94□□□□□ -1.14
USP8-210ENST00000560379 U2SURPO15042 1029 aaKnown RBP7.94□□□□□ -1.14
USP8-210ENST00000560379 KLF4O43474 513 aa7.94□□□□□ -1.14
USP8-210ENST00000560379 PEX14O75381 377 aa7.94□□□□□ -1.14
USP8-210ENST00000560379 PARNO95453 639 aaKnown RBP7.94□□□□□ -1.14
USP8-210ENST00000560379 GPLD1P80108 840 aa7.94□□□□□ -1.14
USP8-210ENST00000560379 PDE12Q6L8Q7 609 aaKnown RBP7.94□□□□□ -1.14
USP8-210ENST00000560379 ANKLE2Q86XL3 938 aa7.94□□□□□ -1.14
USP8-210ENST00000560379 RELL1Q8IUW5 271 aa7.94□□□□□ -1.14
USP8-210ENST00000560379 NME8Q8N427 588 aa7.94□□□□□ -1.14
USP8-210ENST00000560379 GINM1Q9NU53 330 aa7.94□□□□□ -1.14
USP8-210ENST00000560379 FNDC3AQ9Y2H6 1198 aaKnown RBP7.94□□□□□ -1.14
USP8-210ENST00000560379 SETD1AO15047 1707 aaKnown RBP7.94□□□□□ -1.14
USP8-210ENST00000560379 NKTRP30414 1462 aaKnown RBP7.94□□□□□ -1.14
USP8-210ENST00000560379 LTBP4Q8N2S1 1624 aa7.93□□□□□ -1.14
USP8-210ENST00000560379 CCDC194A0A1B0GVG4 234 aa7.93□□□□□ -1.14
USP8-210ENST00000560379 MINDY4BA8MYZ0 360 aa7.93□□□□□ -1.14
USP8-210ENST00000560379 DLL1O00548 723 aa7.93□□□□□ -1.14
USP8-210ENST00000560379 DNAJC6O75061 913 aa7.93□□□□□ -1.14
USP8-210ENST00000560379 EIF3JO75822 258 aaKnown RBP7.93□□□□□ -1.14
USP8-210ENST00000560379 GSTT1P30711 240 aa7.93□□□□□ -1.14
USP8-210ENST00000560379 PWP1Q13610 501 aa7.93□□□□□ -1.14
USP8-210ENST00000560379 RAB33AQ14088 237 aa7.93□□□□□ -1.14
USP8-210ENST00000560379 TRIP4Q15650 581 aaPredicted RBP7.93□□□□□ -1.14
USP8-210ENST00000560379 PLEKHG4Q58EX7 1191 aa7.93□□□□□ -1.14
USP8-210ENST00000560379 PRR23CQ6ZRP0 262 aa7.93□□□□□ -1.14
USP8-210ENST00000560379 TTC9Q92623 222 aa7.93□□□□□ -1.14
USP8-210ENST00000560379 EAF1Q96JC9 268 aaPredicted RBP7.93□□□□□ -1.14
USP8-210ENST00000560379 ELP3Q9H9T3 547 aa7.93□□□□□ -1.14
USP8-210ENST00000560379 SPC25Q9HBM1 224 aa7.93□□□□□ -1.14
USP8-210ENST00000560379 SNTG2Q9NY99 539 aa7.93□□□□□ -1.14
USP8-210ENST00000560379 TMEM63CQ9P1W3 806 aa7.93□□□□□ -1.14
USP8-210ENST00000560379 STRIP2Q9ULQ0 834 aa7.93□□□□□ -1.14
USP8-210ENST00000560379 EID1Q9Y6B2 187 aa7.93□□□□□ -1.14
USP8-210ENST00000560379 ANKRD30BQ9BXX2 1392 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms