RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 RPAP1Q9BWH6 1393 aaPredicted RBP10.85□□□□□ -0.67
VRK1-206ENST00000557222 FGFR2P21802 821 aa10.84□□□□□ -0.67
VRK1-206ENST00000557222 ZEB1P37275 1124 aaPredicted RBP10.84□□□□□ -0.67
VRK1-206ENST00000557222 PPIL2Q13356 520 aa10.84□□□□□ -0.67
VRK1-206ENST00000557222 SNAPC2Q13487 334 aa10.84□□□□□ -0.67
VRK1-206ENST00000557222 PUM3Q15397 648 aaKnown RBP10.84□□□□□ -0.67
VRK1-206ENST00000557222 LRRC24Q50LG9 513 aa10.84□□□□□ -0.67
VRK1-206ENST00000557222 PRDM9Q9NQV7 894 aa10.84□□□□□ -0.67
VRK1-206ENST00000557222 OTOFQ9HC10 1997 aa10.83□□□□□ -0.68
VRK1-206ENST00000557222 E9PSI1 815 aa10.83□□□□□ -0.68
VRK1-206ENST00000557222 PPATQ06203 517 aa10.83□□□□□ -0.68
VRK1-206ENST00000557222 CHAF1AQ13111 956 aaPredicted RBP10.83□□□□□ -0.68
VRK1-206ENST00000557222 KIF22Q14807 665 aa10.83□□□□□ -0.68
VRK1-206ENST00000557222 GRIK5Q16478 980 aa10.83□□□□□ -0.68
VRK1-206ENST00000557222 MSS51Q4VC12 460 aa10.83□□□□□ -0.68
VRK1-206ENST00000557222 Q6ZNB5 142 aa10.83□□□□□ -0.68
VRK1-206ENST00000557222 FAM43AQ8N2R8 423 aa10.83□□□□□ -0.68
VRK1-206ENST00000557222 LPIN2Q92539 896 aa10.83□□□□□ -0.68
VRK1-206ENST00000557222 ZNF341Q9BYN7 854 aa10.83□□□□□ -0.68
VRK1-206ENST00000557222 USP44Q9H0E7 712 aa10.83□□□□□ -0.68
VRK1-206ENST00000557222 SNCAIPQ9Y6H5 919 aa10.83□□□□□ -0.68
VRK1-206ENST00000557222 EYA2O00167 538 aa10.82□□□□□ -0.68
VRK1-206ENST00000557222 TRIM66O15016 1216 aa10.82□□□□□ -0.68
VRK1-206ENST00000557222 SLC5A1P13866 664 aa10.82□□□□□ -0.68
VRK1-206ENST00000557222 ALDH1L2Q3SY69 923 aa10.82□□□□□ -0.68
VRK1-206ENST00000557222 SLC9C1Q4G0N8 1177 aa10.82□□□□□ -0.68
VRK1-206ENST00000557222 FAM9BQ8IZU0 186 aa10.82□□□□□ -0.68
VRK1-206ENST00000557222 FAM151AQ8WW52 585 aa10.82□□□□□ -0.68
VRK1-206ENST00000557222 WRNIP1Q96S55 665 aa10.82□□□□□ -0.68
VRK1-206ENST00000557222 ZNF112Q9UJU3 913 aa10.82□□□□□ -0.68
VRK1-206ENST00000557222 IQSEC3Q9UPP2 1182 aaPredicted RBP10.82□□□□□ -0.68
VRK1-206ENST00000557222 HDAC5Q9UQL6 1122 aa10.82□□□□□ -0.68
VRK1-206ENST00000557222 BTBD19C9JJ37 291 aa10.81□□□□□ -0.68
VRK1-206ENST00000557222 NRG2O14511 850 aaPredicted RBP10.81□□□□□ -0.68
VRK1-206ENST00000557222 EN2P19622 333 aaPredicted RBP10.81□□□□□ -0.68
VRK1-206ENST00000557222 RFX5P48382 616 aaPredicted RBP10.81□□□□□ -0.68
VRK1-206ENST00000557222 LACTBP83111 547 aaPredicted RBP10.81□□□□□ -0.68
VRK1-206ENST00000557222 CAP1Q01518 475 aa10.81□□□□□ -0.68
VRK1-206ENST00000557222 GUCA2AQ02747 115 aa10.81□□□□□ -0.68
VRK1-206ENST00000557222 HABP4Q5JVS0 413 aaKnown RBP10.81□□□□□ -0.68
VRK1-206ENST00000557222 ANKRD23Q86SG2 305 aa10.81□□□□□ -0.68
VRK1-206ENST00000557222 ZNF598Q86UK7 904 aaKnown RBP10.81□□□□□ -0.68
VRK1-206ENST00000557222 ZKSCAN4Q969J2 545 aaPredicted RBP10.81□□□□□ -0.68
VRK1-206ENST00000557222 GNL3LQ9NVN8 582 aaKnown RBP10.81□□□□□ -0.68
VRK1-206ENST00000557222 KCNH4Q9UQ05 1017 aa10.81□□□□□ -0.68
VRK1-206ENST00000557222 FCF1Q9Y324 198 aaKnown RBP10.81□□□□□ -0.68
VRK1-206ENST00000557222 PTCH2Q9Y6C5 1203 aa10.81□□□□□ -0.68
VRK1-206ENST00000557222 CIAO1O76071 339 aa10.8□□□□□ -0.68
VRK1-206ENST00000557222 HOXD10P28358 340 aa10.8□□□□□ -0.68
VRK1-206ENST00000557222 CACNB3P54284 484 aa10.8□□□□□ -0.68
VRK1-206ENST00000557222 NOL9Q5SY16 702 aaKnown RBP10.8□□□□□ -0.68
VRK1-206ENST00000557222 C17orf99Q6UX52 265 aa10.8□□□□□ -0.68
VRK1-206ENST00000557222 SSH1Q8WYL5 1049 aa10.8□□□□□ -0.68
VRK1-206ENST00000557222 SALL1Q9NSC2 1324 aa10.8□□□□□ -0.68
VRK1-206ENST00000557222 CXCL11O14625 94 aa10.79□□□□□ -0.68
VRK1-206ENST00000557222 CT47B1P0C2W7 299 aaPredicted RBP10.79□□□□□ -0.68
VRK1-206ENST00000557222 CAPN2P17655 700 aa10.79□□□□□ -0.68
VRK1-206ENST00000557222 SLC4A8Q2Y0W8 1093 aa10.79□□□□□ -0.68
VRK1-206ENST00000557222 TRIM67Q6ZTA4 783 aa10.79□□□□□ -0.68
VRK1-206ENST00000557222 ATG9AQ7Z3C6 839 aa10.79□□□□□ -0.68
VRK1-206ENST00000557222 PARP9Q8IXQ6 854 aa10.79□□□□□ -0.68
VRK1-206ENST00000557222 KLHDC4Q8TBB5 520 aa10.79□□□□□ -0.68
VRK1-206ENST00000557222 USB1Q9BQ65 265 aaKnown RBP10.79□□□□□ -0.68
VRK1-206ENST00000557222 LDHBP07195 334 aaKnown RBP10.78□□□□□ -0.68
VRK1-206ENST00000557222 SLFN5Q08AF3 891 aa10.78□□□□□ -0.68
VRK1-206ENST00000557222 ZNF697Q5TEC3 545 aa10.78□□□□□ -0.68
VRK1-206ENST00000557222 CDC42EP5Q6NZY7 148 aa10.78□□□□□ -0.68
VRK1-206ENST00000557222 ZGPATQ8N5A5 531 aaKnown RBP10.78□□□□□ -0.68
VRK1-206ENST00000557222 SPIRE2Q8WWL2 714 aa10.78□□□□□ -0.68
VRK1-206ENST00000557222 CEP126Q9P2H0 1117 aa10.78□□□□□ -0.68
VRK1-206ENST00000557222 DENND2AQ9ULE3 1009 aa10.78□□□□□ -0.68
VRK1-206ENST00000557222 DAGLAQ9Y4D2 1042 aa10.78□□□□□ -0.68
VRK1-206ENST00000557222 PDHXO00330 501 aa10.77□□□□□ -0.69
VRK1-206ENST00000557222 ENTPD3O75355 529 aa10.77□□□□□ -0.69
VRK1-206ENST00000557222 INPP5BP32019 993 aa10.77□□□□□ -0.69
VRK1-206ENST00000557222 IL15P40933 162 aaPredicted RBP10.77□□□□□ -0.69
VRK1-206ENST00000557222 MAP3K10Q02779 954 aa10.77□□□□□ -0.69
VRK1-206ENST00000557222 ATP2B3Q16720 1220 aa10.77□□□□□ -0.69
VRK1-206ENST00000557222 MIGA2Q7L4E1 593 aa10.77□□□□□ -0.69
VRK1-206ENST00000557222 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.77□□□□□ -0.69
VRK1-206ENST00000557222 IDI2Q9BXS1 227 aa10.77□□□□□ -0.69
VRK1-206ENST00000557222 SRRDQ9UH36 339 aa10.77□□□□□ -0.69
VRK1-206ENST00000557222 TRIOBPQ9H2D6 2365 aa10.77□□□□□ -0.69
VRK1-206ENST00000557222 PDS5AQ29RF7 1337 aaKnown RBP10.77□□□□□ -0.69
VRK1-206ENST00000557222 ADGRA2Q96PE1 1338 aa10.77□□□□□ -0.69
VRK1-206ENST00000557222 UBTFL1P0CB47 393 aaPredicted RBP10.76□□□□□ -0.69
VRK1-206ENST00000557222 PRDX5P30044 214 aa10.76□□□□□ -0.69
VRK1-206ENST00000557222 PSMC4P43686 418 aa10.76□□□□□ -0.69
VRK1-206ENST00000557222 MMP16P51512 607 aa10.76□□□□□ -0.69
VRK1-206ENST00000557222 MOGSQ13724 837 aa10.76□□□□□ -0.69
VRK1-206ENST00000557222 FASTKD5Q7L8L6 764 aaKnown RBP10.76□□□□□ -0.69
VRK1-206ENST00000557222 TRMT2AQ8IZ69 625 aaKnown RBP10.76□□□□□ -0.69
VRK1-206ENST00000557222 PARK7Q99497 189 aaKnown RBP10.76□□□□□ -0.69
VRK1-206ENST00000557222 ARHGAP39Q9C0H5 1083 aa10.76□□□□□ -0.69
VRK1-206ENST00000557222 SLC24A3Q9HC58 644 aa10.76□□□□□ -0.69
VRK1-206ENST00000557222 COPRSQ9NQ92 184 aa10.76□□□□□ -0.69
VRK1-206ENST00000557222 USP40Q9NVE5 1235 aa10.76□□□□□ -0.69
VRK1-206ENST00000557222 SLC45A1Q9Y2W3 748 aa10.76□□□□□ -0.69
VRK1-206ENST00000557222 MAP4K4O95819 1239 aaPredicted RBP10.75□□□□□ -0.69
VRK1-206ENST00000557222 GRK4P32298 578 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms