RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 TGFBRAP1Q8WUH2 860 aa8.89□□□□□ -0.99
SCFD1-222ENST00000556768 TBC1D2Q9BYX2 928 aa8.89□□□□□ -0.99
SCFD1-222ENST00000556768 TLR7Q9NYK1 1049 aaKnown RBP8.89□□□□□ -0.99
SCFD1-222ENST00000556768 KCNH4Q9UQ05 1017 aa8.89□□□□□ -0.99
SCFD1-222ENST00000556768 A0A1B0GUL6 1792 aa8.89□□□□□ -0.99
SCFD1-222ENST00000556768 GNRH1P01148 92 aa8.89□□□□□ -0.99
SCFD1-222ENST00000556768 HOXD10P28358 340 aa8.89□□□□□ -0.99
SCFD1-222ENST00000556768 USP5P45974 858 aa8.89□□□□□ -0.99
SCFD1-222ENST00000556768 SH3BP5LQ7L8J4 393 aa8.89□□□□□ -0.99
SCFD1-222ENST00000556768 OTOP1Q7RTM1 612 aa8.89□□□□□ -0.99
SCFD1-222ENST00000556768 PIP4P2Q8N4L2 257 aa8.89□□□□□ -0.99
SCFD1-222ENST00000556768 MAGEB6Q8N7X4 407 aa8.89□□□□□ -0.99
SCFD1-222ENST00000556768 CD99L2Q8TCZ2 262 aa8.89□□□□□ -0.99
SCFD1-222ENST00000556768 ZNF384Q8TF68 577 aa8.89□□□□□ -0.99
SCFD1-222ENST00000556768 PARK7Q99497 189 aaKnown RBP8.89□□□□□ -0.99
SCFD1-222ENST00000556768 LRRCC1Q9C099 1032 aa8.89□□□□□ -0.99
SCFD1-222ENST00000556768 ZNF646O15015 1829 aaPredicted RBP8.88□□□□□ -0.99
SCFD1-222ENST00000556768 HTTP42858 3142 aa8.88□□□□□ -0.99
SCFD1-222ENST00000556768 ATRNL1Q5VV63 1379 aa8.88□□□□□ -0.99
SCFD1-222ENST00000556768 TRIM75PA6NK02 468 aa8.88□□□□□ -0.99
SCFD1-222ENST00000556768 TTLL13PA6NNM8 815 aa8.88□□□□□ -0.99
SCFD1-222ENST00000556768 TIE1P35590 1138 aa8.88□□□□□ -0.99
SCFD1-222ENST00000556768 RGS19P49795 217 aa8.88□□□□□ -0.99
SCFD1-222ENST00000556768 SLC9C2Q5TAH2 1124 aa8.88□□□□□ -0.99
SCFD1-222ENST00000556768 MAPKAPK5Q8IW41 473 aa8.88□□□□□ -0.99
SCFD1-222ENST00000556768 DNAJC2Q99543 621 aaKnown RBP8.88□□□□□ -0.99
SCFD1-222ENST00000556768 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.88□□□□□ -0.993e-9■■□□□ 13.6
SCFD1-222ENST00000556768 AS3MTQ9HBK9 375 aa8.88□□□□□ -0.99
SCFD1-222ENST00000556768 PIH1D3Q9NQM4 214 aaKnown RBP8.88□□□□□ -0.99
SCFD1-222ENST00000556768 ASNSP08243 561 aa8.87□□□□□ -0.99
SCFD1-222ENST00000556768 PABPC4Q13310 644 aaKnown RBP eCLIP8.87□□□□□ -0.993e-10■■■□□ 16.3
SCFD1-222ENST00000556768 GADL1Q6ZQY3 521 aa8.87□□□□□ -0.99
SCFD1-222ENST00000556768 TTC6Q86TZ1 520 aa8.87□□□□□ -0.99
SCFD1-222ENST00000556768 MIGA1Q8NAN2 632 aa8.87□□□□□ -0.99
SCFD1-222ENST00000556768 SMCR8Q8TEV9 937 aaPredicted RBP8.87□□□□□ -0.99
SCFD1-222ENST00000556768 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.87□□□□□ -0.99
SCFD1-222ENST00000556768 GPATCH3Q96I76 525 aa8.87□□□□□ -0.99
SCFD1-222ENST00000556768 PCMTD1Q96MG8 357 aaPredicted RBP8.87□□□□□ -0.99
SCFD1-222ENST00000556768 PTPN22Q9Y2R2 807 aa8.87□□□□□ -0.99
SCFD1-222ENST00000556768 AFG3L2Q9Y4W6 797 aa8.87□□□□□ -0.99
SCFD1-222ENST00000556768 CASP8AP2Q9UKL3 1982 aa8.87□□□□□ -0.99
SCFD1-222ENST00000556768 A0A0G2JLL6 359 aaPredicted RBP8.87□□□□□ -0.99
SCFD1-222ENST00000556768 USP17L5A8MUK1 530 aa8.87□□□□□ -0.99
SCFD1-222ENST00000556768 GOLIM4O00461 696 aa8.87□□□□□ -0.99
SCFD1-222ENST00000556768 FMNL1O95466 1100 aaPredicted RBP8.87□□□□□ -0.99
SCFD1-222ENST00000556768 CAP2P40123 477 aa8.87□□□□□ -0.99
SCFD1-222ENST00000556768 PRMT2P55345 433 aa8.87□□□□□ -0.99
SCFD1-222ENST00000556768 SOX10P56693 466 aa8.87□□□□□ -0.99
SCFD1-222ENST00000556768 LACTBP83111 547 aaPredicted RBP8.87□□□□□ -0.99
SCFD1-222ENST00000556768 SLC9C1Q4G0N8 1177 aa8.87□□□□□ -0.99
SCFD1-222ENST00000556768 PRRT2Q7Z6L0 340 aaPredicted RBP8.87□□□□□ -0.99
SCFD1-222ENST00000556768 SIRT2Q8IXJ6 389 aa8.87□□□□□ -0.99
SCFD1-222ENST00000556768 ZNF280CQ8ND82 737 aa8.87□□□□□ -0.99
SCFD1-222ENST00000556768 GINM1Q9NU53 330 aa8.87□□□□□ -0.99
SCFD1-222ENST00000556768 PNMA3Q9UL41 463 aa8.87□□□□□ -0.99
SCFD1-222ENST00000556768 PALD1Q9ULE6 856 aa8.87□□□□□ -0.99
SCFD1-222ENST00000556768 FLT1P17948 1338 aa8.86□□□□□ -0.99
SCFD1-222ENST00000556768 MAGEB6P1A0A0J9YX57 407 aa8.86□□□□□ -0.99
SCFD1-222ENST00000556768 SPP2Q13103 211 aa8.86□□□□□ -0.99
SCFD1-222ENST00000556768 C20orf194Q5TEA3 1177 aa8.86□□□□□ -0.99
SCFD1-222ENST00000556768 ZSCAN25Q6NSZ9 544 aa8.86□□□□□ -0.99
SCFD1-222ENST00000556768 ADGRA1Q86SQ6 560 aa8.86□□□□□ -0.99
SCFD1-222ENST00000556768 AMOTL1Q8IY63 956 aa8.86□□□□□ -0.99
SCFD1-222ENST00000556768 CRNKL1Q9BZJ0 848 aaKnown RBP8.86□□□□□ -0.99
SCFD1-222ENST00000556768 ANTXR1Q9H6X2 564 aa8.86□□□□□ -0.99
SCFD1-222ENST00000556768 CPA4Q9UI42 421 aa8.86□□□□□ -0.99
SCFD1-222ENST00000556768 SLC45A1Q9Y2W3 748 aa8.86□□□□□ -0.99
SCFD1-222ENST00000556768 NDUFB9Q9Y6M9 179 aa8.86□□□□□ -0.99
SCFD1-222ENST00000556768 AKAP11Q9UKA4 1901 aa8.86□□□□□ -0.99
SCFD1-222ENST00000556768 RFX7Q2KHR2 1363 aa8.86□□□□□ -0.99
SCFD1-222ENST00000556768 MKI67P46013 3256 aaKnown RBP8.85□□□□□ -0.99
SCFD1-222ENST00000556768 FAM196BA6NMK8 535 aa8.85□□□□□ -0.99
SCFD1-222ENST00000556768 POLR3DP05423 398 aaPredicted RBP8.85□□□□□ -0.99
SCFD1-222ENST00000556768 ATP5JP18859 108 aa8.85□□□□□ -0.99
SCFD1-222ENST00000556768 PSMC4P43686 418 aa8.85□□□□□ -0.99
SCFD1-222ENST00000556768 DYNLL1P63167 89 aaKnown RBP8.85□□□□□ -0.99
SCFD1-222ENST00000556768 MCM6Q14566 821 aa8.85□□□□□ -0.99
SCFD1-222ENST00000556768 C17orf99Q6UX52 265 aa8.85□□□□□ -0.99
SCFD1-222ENST00000556768 PROCA1Q8NCQ7 364 aaPredicted RBP8.85□□□□□ -0.99
SCFD1-222ENST00000556768 YTHDC1Q96MU7 727 aaKnown RBP8.85□□□□□ -0.99
SCFD1-222ENST00000556768 BOLA2Q9H3K6 86 aa8.85□□□□□ -0.99
SCFD1-222ENST00000556768 PAG1Q9NWQ8 432 aa8.85□□□□□ -0.99
SCFD1-222ENST00000556768 TMOD4Q9NZQ9 345 aa8.85□□□□□ -0.99
SCFD1-222ENST00000556768 SAP30BPQ9UHR5 308 aaKnown RBP8.85□□□□□ -0.99
SCFD1-222ENST00000556768 SERPINB13Q9UIV8 391 aa8.85□□□□□ -0.99
SCFD1-222ENST00000556768 ARAP2Q8WZ64 1704 aa8.85□□□□□ -0.99
SCFD1-222ENST00000556768 BRCA2P51587 3418 aa8.85□□□□□ -0.99
SCFD1-222ENST00000556768 C2orf72A6NCS6 295 aa8.84□□□□□ -0.99
SCFD1-222ENST00000556768 CYP2C8P10632 490 aa8.84□□□□□ -0.99
SCFD1-222ENST00000556768 LRRFIP1Q32MZ4 808 aaKnown RBP8.84□□□□□ -0.99
SCFD1-222ENST00000556768 RAET1EQ8TD07 263 aa8.84□□□□□ -0.99
SCFD1-222ENST00000556768 CABP5Q9NP86 173 aa8.84□□□□□ -0.99
SCFD1-222ENST00000556768 AGTPBP1Q9UPW5 1226 aa8.84□□□□□ -0.99
SCFD1-222ENST00000556768 ECM29Q5VYK3 1845 aa8.84□□□□□ -0.99
SCFD1-222ENST00000556768 COL2A1P02458 1487 aaPredicted RBP8.84□□□□□ -0.99
SCFD1-222ENST00000556768 C19orf81C9J6K1 198 aa8.84□□□□□ -0.99
SCFD1-222ENST00000556768 PDE6AP16499 860 aa8.84□□□□□ -0.99
SCFD1-222ENST00000556768 FCGRTP55899 365 aa8.84□□□□□ -0.99
SCFD1-222ENST00000556768 GPAT2Q6NUI2 795 aa8.84□□□□□ -0.99
SCFD1-222ENST00000556768 METTL16Q86W50 562 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms