RNA–Protein interactions for RNA: ENST00000556249.1

SDR39U1-217, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-217ENST00000556249 SHROOM1Q2M3G4 852 aaPredicted RBP19.53■□□□□ 0.72
SDR39U1-217ENST00000556249 SPTY2D1Q68D10 685 aaPredicted RBP19.53■□□□□ 0.72
SDR39U1-217ENST00000556249 TBC1D9Q6ZT07 1266 aa19.53■□□□□ 0.72
SDR39U1-217ENST00000556249 ITPRIPQ8IWB1 547 aa19.53■□□□□ 0.72
SDR39U1-217ENST00000556249 FBXO3Q9UK99 471 aa19.53■□□□□ 0.72
SDR39U1-217ENST00000556249 COG6Q9Y2V7 657 aa19.53■□□□□ 0.72
SDR39U1-217ENST00000556249 ATAD5Q96QE3 1844 aa19.53■□□□□ 0.72
SDR39U1-217ENST00000556249 UBTFL1P0CB47 393 aaPredicted RBP19.52■□□□□ 0.72
SDR39U1-217ENST00000556249 PI16Q6UXB8 463 aa19.52■□□□□ 0.72
SDR39U1-217ENST00000556249 GPRC5AQ8NFJ5 357 aa19.52■□□□□ 0.72
SDR39U1-217ENST00000556249 PORCNQ9H237 461 aa19.52■□□□□ 0.72
SDR39U1-217ENST00000556249 CHMP4BQ9H444 224 aaKnown RBP19.52■□□□□ 0.72
SDR39U1-217ENST00000556249 DDX19BQ9UMR2 479 aa19.52■□□□□ 0.72
SDR39U1-217ENST00000556249 XRCC5P13010 732 aaKnown RBP19.51■□□□□ 0.71
SDR39U1-217ENST00000556249 HERVK_113P62684 666 aa19.51■□□□□ 0.71
SDR39U1-217ENST00000556249 SOCS4Q8WXH5 440 aa19.51■□□□□ 0.71
SDR39U1-217ENST00000556249 XAGE2Q96GT9 111 aa19.51■□□□□ 0.71
SDR39U1-217ENST00000556249 AS3MTQ9HBK9 375 aa19.51■□□□□ 0.71
SDR39U1-217ENST00000556249 RBPJLQ9UBG7 517 aa19.51■□□□□ 0.71
SDR39U1-217ENST00000556249 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.51■□□□□ 0.71
SDR39U1-217ENST00000556249 A0A1B0GUL7 405 aa19.5■□□□□ 0.71
SDR39U1-217ENST00000556249 ATN1P54259 1190 aaPredicted RBP19.5■□□□□ 0.71
SDR39U1-217ENST00000556249 BACE1P56817 501 aa19.5■□□□□ 0.71
SDR39U1-217ENST00000556249 AAMPQ13685 434 aa19.5■□□□□ 0.71
SDR39U1-217ENST00000556249 POTEEQ6S8J3 1075 aa19.5■□□□□ 0.71
SDR39U1-217ENST00000556249 USP6NLQ92738 828 aa19.5■□□□□ 0.71
SDR39U1-217ENST00000556249 PAGR1Q9BTK6 254 aa19.5■□□□□ 0.71
SDR39U1-217ENST00000556249 TBC1D2Q9BYX2 928 aa19.5■□□□□ 0.71
SDR39U1-217ENST00000556249 SENP6Q9GZR1 1112 aaPredicted RBP19.5■□□□□ 0.71
SDR39U1-217ENST00000556249 TMOD4Q9NZQ9 345 aa19.5■□□□□ 0.71
SDR39U1-217ENST00000556249 NDUFB9Q9Y6M9 179 aa19.5■□□□□ 0.71
SDR39U1-217ENST00000556249 NPM3O75607 178 aaKnown RBP19.49■□□□□ 0.71
SDR39U1-217ENST00000556249 FAM109BQ6ICB4 259 aaPredicted RBP19.49■□□□□ 0.71
SDR39U1-217ENST00000556249 GPR142Q7Z601 462 aa19.49■□□□□ 0.71
SDR39U1-217ENST00000556249 CCAR1Q8IX12 1150 aaKnown RBP19.49■□□□□ 0.71
SDR39U1-217ENST00000556249 EXOC6Q8TAG9 804 aa19.49■□□□□ 0.71
SDR39U1-217ENST00000556249 NSUN4Q96CB9 384 aaKnown RBP19.49■□□□□ 0.71
SDR39U1-217ENST00000556249 LBHD1Q9BQE6 289 aaPredicted RBP19.49■□□□□ 0.71
SDR39U1-217ENST00000556249 HMG20BQ9P0W2 317 aa19.49■□□□□ 0.71
SDR39U1-217ENST00000556249 EYSQ5T1H1 3165 aa19.49■□□□□ 0.71
SDR39U1-217ENST00000556249 HOXA7P31268 230 aaPredicted RBP19.48■□□□□ 0.71
SDR39U1-217ENST00000556249 ERVK-9P63128 1117 aa19.48■□□□□ 0.71
SDR39U1-217ENST00000556249 ERVK-24P63145 666 aa19.48■□□□□ 0.71
SDR39U1-217ENST00000556249 TFCP2Q12800 502 aa19.48■□□□□ 0.71
SDR39U1-217ENST00000556249 TEX11Q8IYF3 940 aa19.48■□□□□ 0.71
SDR39U1-217ENST00000556249 SH3RF3Q8TEJ3 882 aaPredicted RBP19.48■□□□□ 0.71
SDR39U1-217ENST00000556249 WDR18Q9BV38 432 aa19.48■□□□□ 0.71
SDR39U1-217ENST00000556249 COPRSQ9NQ92 184 aa19.48■□□□□ 0.71
SDR39U1-217ENST00000556249 RAI14Q9P0K7 980 aa19.48■□□□□ 0.71
SDR39U1-217ENST00000556249 PDS5AQ29RF7 1337 aaKnown RBP19.48■□□□□ 0.71
SDR39U1-217ENST00000556249 ZBTB22O15209 634 aa19.47■□□□□ 0.71
SDR39U1-217ENST00000556249 GDF11O95390 407 aa19.47■□□□□ 0.71
SDR39U1-217ENST00000556249 MAPK4P31152 587 aa19.47■□□□□ 0.71
SDR39U1-217ENST00000556249 RGS2P41220 211 aa19.47■□□□□ 0.71
SDR39U1-217ENST00000556249 MORN1Q5T089 497 aa19.47■□□□□ 0.71
SDR39U1-217ENST00000556249 ZNF697Q5TEC3 545 aa19.47■□□□□ 0.71
SDR39U1-217ENST00000556249 NEUROD6Q96NK8 337 aa19.47■□□□□ 0.71
SDR39U1-217ENST00000556249 CDX2Q99626 313 aaPredicted RBP19.47■□□□□ 0.71
SDR39U1-217ENST00000556249 FLRT1Q9NZU1 646 aa19.47■□□□□ 0.71
SDR39U1-217ENST00000556249 COL2A1P02458 1487 aaPredicted RBP19.47■□□□□ 0.71
SDR39U1-217ENST00000556249 LAMA2P24043 3122 aaKnown RBP19.46■□□□□ 0.71
SDR39U1-217ENST00000556249 LDHCP07864 332 aa19.46■□□□□ 0.71
SDR39U1-217ENST00000556249 PLEKHH3Q7Z736 793 aa19.46■□□□□ 0.71
SDR39U1-217ENST00000556249 TRMT44Q8IYL2 757 aaKnown RBP19.46■□□□□ 0.71
SDR39U1-217ENST00000556249 DNAJC18Q9H819 358 aa19.46■□□□□ 0.71
SDR39U1-217ENST00000556249 PI4KBQ9UBF8 816 aa19.46■□□□□ 0.71
SDR39U1-217ENST00000556249 HERC5Q9UII4 1024 aaKnown RBP19.46■□□□□ 0.71
SDR39U1-217ENST00000556249 GTF3C3Q9Y5Q9 886 aa19.46■□□□□ 0.71
SDR39U1-217ENST00000556249 GSTO1P78417 241 aa19.45■□□□□ 0.7
SDR39U1-217ENST00000556249 SPATA5Q8NB90 893 aa19.45■□□□□ 0.7
SDR39U1-217ENST00000556249 APBA2Q99767 749 aa19.45■□□□□ 0.7
SDR39U1-217ENST00000556249 USP17L10C9JJH3 530 aa19.44■□□□□ 0.7
SDR39U1-217ENST00000556249 ASNSP08243 561 aa19.44■□□□□ 0.7
SDR39U1-217ENST00000556249 CNGA1P29973 690 aa19.44■□□□□ 0.7
SDR39U1-217ENST00000556249 SHHQ15465 462 aa19.44■□□□□ 0.7
SDR39U1-217ENST00000556249 MAPKAPK5Q8IW41 473 aa19.44■□□□□ 0.7
SDR39U1-217ENST00000556249 CWC22Q9HCG8 908 aaKnown RBP19.44■□□□□ 0.7
SDR39U1-217ENST00000556249 EMILIN3Q9NT22 766 aa19.44■□□□□ 0.7
SDR39U1-217ENST00000556249 AATFQ9NY61 560 aaKnown RBP eCLIP19.44■□□□□ 0.7
SDR39U1-217ENST00000556249 SIPA1L1O43166 1804 aa19.44■□□□□ 0.7
SDR39U1-217ENST00000556249 C19orf81C9J6K1 198 aa19.43■□□□□ 0.7
SDR39U1-217ENST00000556249 MAP2K5Q13163 448 aa19.43■□□□□ 0.7
SDR39U1-217ENST00000556249 C9orf50Q5SZB4 431 aa19.43■□□□□ 0.7
SDR39U1-217ENST00000556249 WDR78Q5VTH9 848 aa19.43■□□□□ 0.7
SDR39U1-217ENST00000556249 MAFAQ8NHW3 353 aaPredicted RBP19.43■□□□□ 0.7
SDR39U1-217ENST00000556249 TGFBRAP1Q8WUH2 860 aa19.43■□□□□ 0.7
SDR39U1-217ENST00000556249 EDC3Q96F86 508 aaKnown RBP19.43■□□□□ 0.7
SDR39U1-217ENST00000556249 MEIS3Q99687 375 aa19.43■□□□□ 0.7
SDR39U1-217ENST00000556249 SEMA6BQ9H3T3 888 aa19.43■□□□□ 0.7
SDR39U1-217ENST00000556249 CNMDO75829 334 aa19.42■□□□□ 0.7
SDR39U1-217ENST00000556249 GNAI3P08754 354 aa19.42■□□□□ 0.7
SDR39U1-217ENST00000556249 RTP1P59025 263 aa19.42■□□□□ 0.7
SDR39U1-217ENST00000556249 ZYXQ15942 572 aaKnown RBP19.42■□□□□ 0.7
SDR39U1-217ENST00000556249 GORABQ5T7V8 394 aa19.42■□□□□ 0.7
SDR39U1-217ENST00000556249 CRACR2BQ8N4Y2 399 aaPredicted RBP19.42■□□□□ 0.7
SDR39U1-217ENST00000556249 MYLIPQ8WY64 445 aa19.42■□□□□ 0.7
SDR39U1-217ENST00000556249 ZBTB40Q9NUA8 1239 aa19.42■□□□□ 0.7
SDR39U1-217ENST00000556249 LRP2BPQ9P2M1 347 aa19.42■□□□□ 0.7
SDR39U1-217ENST00000556249 PRKAG2Q9UGJ0 569 aa19.42■□□□□ 0.7
SDR39U1-217ENST00000556249 DDX20Q9UHI6 824 aaKnown RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms