RNA–Protein interactions for RNA: ENST00000555832.1

XRCC3-214, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-214ENST00000555832 CNKSR2Q8WXI2 1034 aa20.5■□□□□ 0.87
XRCC3-214ENST00000555832 MKNK2Q9HBH9 465 aa20.5■□□□□ 0.87
XRCC3-214ENST00000555832 ZFYVE28Q9HCC9 887 aa20.5■□□□□ 0.87
XRCC3-214ENST00000555832 ZBTB21Q9ULJ3 1066 aa20.5■□□□□ 0.87
XRCC3-214ENST00000555832 C19orf81C9J6K1 198 aa20.49■□□□□ 0.87
XRCC3-214ENST00000555832 MPHOSPH10O00566 681 aaKnown RBP20.49■□□□□ 0.87
XRCC3-214ENST00000555832 GABPAQ06546 454 aa20.49■□□□□ 0.87
XRCC3-214ENST00000555832 PDE4BQ07343 736 aa20.49■□□□□ 0.87
XRCC3-214ENST00000555832 NMIQ13287 307 aaPredicted RBP20.49■□□□□ 0.87
XRCC3-214ENST00000555832 WDR18Q9BV38 432 aa20.49■□□□□ 0.87
XRCC3-214ENST00000555832 CFHR5Q9BXR6 569 aa20.49■□□□□ 0.87
XRCC3-214ENST00000555832 DNAJC18Q9H819 358 aa20.49■□□□□ 0.87
XRCC3-214ENST00000555832 TMOD4Q9NZQ9 345 aa20.49■□□□□ 0.87
XRCC3-214ENST00000555832 AFG3L2Q9Y4W6 797 aa20.49■□□□□ 0.87
XRCC3-214ENST00000555832 MYH1P12882 1939 aa20.49■□□□□ 0.87
XRCC3-214ENST00000555832 TRIM75PA6NK02 468 aa20.48■□□□□ 0.87
XRCC3-214ENST00000555832 HSPA8P11142 646 aaKnown RBP20.48■□□□□ 0.87
XRCC3-214ENST00000555832 TAF1CQ15572 869 aaPredicted RBP20.48■□□□□ 0.87
XRCC3-214ENST00000555832 NOM1Q5C9Z4 860 aaKnown RBP20.48■□□□□ 0.87
XRCC3-214ENST00000555832 C16orf86Q6ZW13 317 aa20.48■□□□□ 0.87
XRCC3-214ENST00000555832 ANKRD23Q86SG2 305 aa20.48■□□□□ 0.87
XRCC3-214ENST00000555832 BRI3BPQ8WY22 251 aa20.48■□□□□ 0.87
XRCC3-214ENST00000555832 SEC62Q99442 399 aaKnown RBP20.48■□□□□ 0.87
XRCC3-214ENST00000555832 SH2D4AQ9H788 454 aa20.48■□□□□ 0.87
XRCC3-214ENST00000555832 OTOFQ9HC10 1997 aa20.48■□□□□ 0.87
XRCC3-214ENST00000555832 CCDC171Q6TFL3 1326 aa20.48■□□□□ 0.87
XRCC3-214ENST00000555832 A0A0G2JLL6 359 aaPredicted RBP20.47■□□□□ 0.87
XRCC3-214ENST00000555832 GDF11O95390 407 aa20.47■□□□□ 0.87
XRCC3-214ENST00000555832 GH2P01242 217 aa20.47■□□□□ 0.87
XRCC3-214ENST00000555832 CDK8P49336 464 aa20.47■□□□□ 0.87
XRCC3-214ENST00000555832 LBX1P52954 281 aa20.47■□□□□ 0.87
XRCC3-214ENST00000555832 USP14P54578 494 aa20.47■□□□□ 0.87
XRCC3-214ENST00000555832 SPP2Q13103 211 aa20.47■□□□□ 0.87
XRCC3-214ENST00000555832 RAB3GAP1Q15042 981 aa20.47■□□□□ 0.87
XRCC3-214ENST00000555832 ARHGEF6Q15052 776 aa20.47■□□□□ 0.87
XRCC3-214ENST00000555832 CWC27Q6UX04 472 aaKnown RBP20.47■□□□□ 0.87
XRCC3-214ENST00000555832 TMEM179Q6ZVK1 233 aa20.47■□□□□ 0.87
XRCC3-214ENST00000555832 PRRT2Q7Z6L0 340 aaPredicted RBP20.47■□□□□ 0.87
XRCC3-214ENST00000555832 PROCA1Q8NCQ7 364 aaPredicted RBP20.47■□□□□ 0.87
XRCC3-214ENST00000555832 FAM227BQ96M60 508 aa20.47■□□□□ 0.87
XRCC3-214ENST00000555832 FEZ1Q99689 392 aa20.47■□□□□ 0.87
XRCC3-214ENST00000555832 NAV1Q8NEY1 1877 aa20.47■□□□□ 0.87
XRCC3-214ENST00000555832 CDK5RAP2Q96SN8 1893 aa20.46■□□□□ 0.87
XRCC3-214ENST00000555832 USP17L10C9JJH3 530 aa20.46■□□□□ 0.87
XRCC3-214ENST00000555832 SHMT1P34896 483 aa20.46■□□□□ 0.87
XRCC3-214ENST00000555832 ALX1Q15699 326 aa20.46■□□□□ 0.87
XRCC3-214ENST00000555832 PPP4R3BQ5MIZ7 849 aa20.46■□□□□ 0.87
XRCC3-214ENST00000555832 CASC1Q6TDU7 716 aa20.46■□□□□ 0.87
XRCC3-214ENST00000555832 GADL1Q6ZQY3 521 aa20.46■□□□□ 0.87
XRCC3-214ENST00000555832 ZNF444Q8N0Y2 327 aaPredicted RBP20.46■□□□□ 0.87
XRCC3-214ENST00000555832 PNMA3Q9UL41 463 aa20.46■□□□□ 0.87
XRCC3-214ENST00000555832 SLC45A1Q9Y2W3 748 aa20.46■□□□□ 0.87
XRCC3-214ENST00000555832 RAD50Q92878 1312 aa20.46■□□□□ 0.87
XRCC3-214ENST00000555832 A0A0D9SFI3 127 aa20.45■□□□□ 0.86
XRCC3-214ENST00000555832 IGF2BP3O00425 579 aaKnown RBP eCLIP20.45■□□□□ 0.86
XRCC3-214ENST00000555832 CYP2D6P10635 497 aa20.45■□□□□ 0.86
XRCC3-214ENST00000555832 PARK7Q99497 189 aaKnown RBP20.45■□□□□ 0.86
XRCC3-214ENST00000555832 ARHGEF10LQ9HCE6 1279 aa20.45■□□□□ 0.86
XRCC3-214ENST00000555832 CTNNA3Q9UI47 895 aa20.45■□□□□ 0.86
XRCC3-214ENST00000555832 DOCK1Q14185 1865 aa20.44■□□□□ 0.86
XRCC3-214ENST00000555832 BTBD19C9JJ37 291 aa20.44■□□□□ 0.86
XRCC3-214ENST00000555832 SLURP2P0DP57 97 aa20.44■□□□□ 0.86
XRCC3-214ENST00000555832 BACE1P56817 501 aa20.44■□□□□ 0.86
XRCC3-214ENST00000555832 CCDC129Q6ZRS4 1044 aa20.44■□□□□ 0.86
XRCC3-214ENST00000555832 DYNLL2Q96FJ2 89 aa20.44■□□□□ 0.86
XRCC3-214ENST00000555832 ZMYM6O95789 1325 aa20.44■□□□□ 0.86
XRCC3-214ENST00000555832 ROBO3Q96MS0 1386 aa20.44■□□□□ 0.86
XRCC3-214ENST00000555832 PDHXO00330 501 aa20.43■□□□□ 0.86
XRCC3-214ENST00000555832 TBC1D8O95759 1140 aa20.43■□□□□ 0.86
XRCC3-214ENST00000555832 GSPT1P15170 499 aaKnown RBP20.43■□□□□ 0.86
XRCC3-214ENST00000555832 NT5C2P49902 561 aa20.43■□□□□ 0.86
XRCC3-214ENST00000555832 PPARAQ07869 468 aa20.43■□□□□ 0.86
XRCC3-214ENST00000555832 BMP2KLQ5H9B9 411 aa20.43■□□□□ 0.86
XRCC3-214ENST00000555832 SH3D19Q5HYK7 790 aa20.43■□□□□ 0.86
XRCC3-214ENST00000555832 USP17L2Q6R6M4 530 aa20.43■□□□□ 0.86
XRCC3-214ENST00000555832 PTPN18Q99952 460 aa20.43■□□□□ 0.86
XRCC3-214ENST00000555832 KANSL2Q9H9L4 492 aa20.43■□□□□ 0.86
XRCC3-214ENST00000555832 EPB41L4AQ9HCS5 686 aaPredicted RBP20.43■□□□□ 0.86
XRCC3-214ENST00000555832 TSKSQ9UJT2 592 aa20.43■□□□□ 0.86
XRCC3-214ENST00000555832 AGTPBP1Q9UPW5 1226 aa20.43■□□□□ 0.86
XRCC3-214ENST00000555832 CYP2D7A0A087X1C5 515 aa20.42■□□□□ 0.86
XRCC3-214ENST00000555832 GPR25O00155 361 aa20.42■□□□□ 0.86
XRCC3-214ENST00000555832 HSPD1P10809 573 aaKnown RBP20.42■□□□□ 0.86
XRCC3-214ENST00000555832 PCP11498 1178 aaKnown RBP20.42■□□□□ 0.86
XRCC3-214ENST00000555832 OSBPP22059 807 aa20.42■□□□□ 0.86
XRCC3-214ENST00000555832 FAM43AQ8N2R8 423 aa20.42■□□□□ 0.86
XRCC3-214ENST00000555832 RNF41Q9H4P4 317 aaPredicted RBP20.42■□□□□ 0.86
XRCC3-214ENST00000555832 CEP350Q5VT06 3117 aa20.42■□□□□ 0.86
XRCC3-214ENST00000555832 FKTNO75072 461 aa20.41■□□□□ 0.86
XRCC3-214ENST00000555832 HMGCS2P54868 508 aa20.41■□□□□ 0.86
XRCC3-214ENST00000555832 CRHR2Q13324 411 aa20.41■□□□□ 0.86
XRCC3-214ENST00000555832 MTMR2Q13614 643 aa20.41■□□□□ 0.86
XRCC3-214ENST00000555832 RRP1BQ14684 758 aaKnown RBP20.41■□□□□ 0.86
XRCC3-214ENST00000555832 KIF22Q14807 665 aa20.41■□□□□ 0.86
XRCC3-214ENST00000555832 KIAA1211Q6ZU35 1233 aa20.41■□□□□ 0.86
XRCC3-214ENST00000555832 SMCR8Q8TEV9 937 aaPredicted RBP20.41■□□□□ 0.86
XRCC3-214ENST00000555832 DSCC1Q9BVC3 393 aa20.41■□□□□ 0.86
XRCC3-214ENST00000555832 KIAA1683Q9H0B3 1180 aa20.41■□□□□ 0.86
XRCC3-214ENST00000555832 DDX60LQ5H9U9 1706 aaKnown RBP20.41■□□□□ 0.86
XRCC3-214ENST00000555832 ICA1Q05084 483 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms