RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 CCDC105Q8IYK2 499 aa7.62□□□□□ -1.19
SYNE2-216ENST00000555002 RBSNQ9H1K0 784 aa7.62□□□□□ -1.19
SYNE2-216ENST00000555002 ORC6Q9Y5N6 252 aa7.62□□□□□ -1.19
SYNE2-216ENST00000555002 CCDC141Q6ZP82 1450 aa7.62□□□□□ -1.19
SYNE2-216ENST00000555002 ACTN4O43707 911 aaKnown RBP7.62□□□□□ -1.19
SYNE2-216ENST00000555002 TNNI1P19237 187 aa7.62□□□□□ -1.19
SYNE2-216ENST00000555002 PSMB7Q99436 277 aa7.62□□□□□ -1.19
SYNE2-216ENST00000555002 GCNT3O95395 438 aa7.62□□□□□ -1.19
SYNE2-216ENST00000555002 FAM102BQ5T8I3 360 aa7.62□□□□□ -1.19
SYNE2-216ENST00000555002 CAPN12Q6ZSI9 719 aa7.62□□□□□ -1.19
SYNE2-216ENST00000555002 MIER3Q7Z3K6 550 aa7.62□□□□□ -1.19
SYNE2-216ENST00000555002 VSIG1Q86XK7 387 aa7.62□□□□□ -1.19
SYNE2-216ENST00000555002 CDC26Q8NHZ8 85 aa7.62□□□□□ -1.19
SYNE2-216ENST00000555002 CFTRP13569 1480 aa7.62□□□□□ -1.19
SYNE2-216ENST00000555002 DNM1Q05193 864 aaKnown RBP7.62□□□□□ -1.19
SYNE2-216ENST00000555002 VWA3BQ502W6 1294 aa7.62□□□□□ -1.19
SYNE2-216ENST00000555002 MYSM1Q5VVJ2 828 aa7.62□□□□□ -1.19
SYNE2-216ENST00000555002 SCYL2Q6P3W7 929 aa7.62□□□□□ -1.19
SYNE2-216ENST00000555002 ANKRD2Q9GZV1 360 aa7.62□□□□□ -1.19
SYNE2-216ENST00000555002 CAPN9O14815 690 aa7.62□□□□□ -1.19
SYNE2-216ENST00000555002 GNAT2P19087 354 aa7.62□□□□□ -1.19
SYNE2-216ENST00000555002 CCDC38Q502W7 563 aa7.62□□□□□ -1.19
SYNE2-216ENST00000555002 CCDC93Q567U6 631 aa7.62□□□□□ -1.19
SYNE2-216ENST00000555002 C8orf74Q6P047 294 aa7.62□□□□□ -1.19
SYNE2-216ENST00000555002 B4GALNT4Q76KP1 1039 aa7.62□□□□□ -1.19
SYNE2-216ENST00000555002 CNGA4Q8IV77 575 aa7.62□□□□□ -1.19
SYNE2-216ENST00000555002 MMS19Q96T76 1030 aa7.62□□□□□ -1.19
SYNE2-216ENST00000555002 ALDH1L2Q3SY69 923 aa7.62□□□□□ -1.19
SYNE2-216ENST00000555002 MSH6P52701 1360 aa7.61□□□□□ -1.19
SYNE2-216ENST00000555002 TBCCQ15814 346 aa7.61□□□□□ -1.19
SYNE2-216ENST00000555002 Q3C1V9 767 aa7.61□□□□□ -1.19
SYNE2-216ENST00000555002 AKR1B15C9JRZ8 316 aaPredicted RBP7.61□□□□□ -1.19
SYNE2-216ENST00000555002 MMEL1Q495T6 779 aa7.61□□□□□ -1.19
SYNE2-216ENST00000555002 LGSNQ5TDP6 509 aa7.61□□□□□ -1.19
SYNE2-216ENST00000555002 SZRD1Q7Z422 152 aa7.61□□□□□ -1.19
SYNE2-216ENST00000555002 TBC1D2Q9BYX2 928 aa7.61□□□□□ -1.19
SYNE2-216ENST00000555002 CEP104O60308 925 aa7.61□□□□□ -1.19
SYNE2-216ENST00000555002 CNNM4Q6P4Q7 775 aa7.61□□□□□ -1.19
SYNE2-216ENST00000555002 SYT10Q6XYQ8 523 aa7.61□□□□□ -1.19
SYNE2-216ENST00000555002 IGSF22Q8N9C0 903 aa7.61□□□□□ -1.19
SYNE2-216ENST00000555002 GIGYF1O75420 1035 aaPredicted RBP7.61□□□□□ -1.19
SYNE2-216ENST00000555002 IFNB1P01574 187 aa7.61□□□□□ -1.19
SYNE2-216ENST00000555002 ECE1P42892 770 aa7.61□□□□□ -1.19
SYNE2-216ENST00000555002 PTPROQ16827 1216 aa7.61□□□□□ -1.19
SYNE2-216ENST00000555002 TRAPPC3LQ5T215 181 aa7.61□□□□□ -1.19
SYNE2-216ENST00000555002 ALKBH8Q96BT7 664 aaKnown RBP7.61□□□□□ -1.19
SYNE2-216ENST00000555002 SLC13A4Q9UKG4 626 aa7.61□□□□□ -1.19
SYNE2-216ENST00000555002 NOP14P78316 857 aaKnown RBP7.61□□□□□ -1.19
SYNE2-216ENST00000555002 DZIP3Q86Y13 1208 aaKnown RBP7.61□□□□□ -1.19
SYNE2-216ENST00000555002 WDR7Q9Y4E6 1490 aa7.61□□□□□ -1.19
SYNE2-216ENST00000555002 CYP2J2P51589 502 aa7.61□□□□□ -1.19
SYNE2-216ENST00000555002 KRT33BQ14525 404 aa7.61□□□□□ -1.19
SYNE2-216ENST00000555002 DBN1Q16643 649 aa7.61□□□□□ -1.19
SYNE2-216ENST00000555002 ZBTB41Q5SVQ8 909 aa7.61□□□□□ -1.19
SYNE2-216ENST00000555002 NIM1KQ8IY84 436 aa7.61□□□□□ -1.19
SYNE2-216ENST00000555002 SCHIP1Q9P0W5 487 aaPredicted RBP7.61□□□□□ -1.19
SYNE2-216ENST00000555002 ANGPTL8Q6UXH0 198 aa7.61□□□□□ -1.19
SYNE2-216ENST00000555002 CDCA7Q9BWT1 371 aaPredicted RBP7.61□□□□□ -1.19
SYNE2-216ENST00000555002 C20orf194Q5TEA3 1177 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 ARFGAP2Q8N6H7 521 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 METTL14Q9HCE5 456 aaKnown RBP7.6□□□□□ -1.19
SYNE2-216ENST00000555002 ABCC11Q96J66 1382 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 TYW5A2RUC4 315 aaKnown RBP7.6□□□□□ -1.19
SYNE2-216ENST00000555002 RNF113AO15541 343 aaKnown RBP7.6□□□□□ -1.19
SYNE2-216ENST00000555002 KIF11P52732 1056 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 YWHAEP62258 255 aaKnown RBP7.6□□□□□ -1.19
SYNE2-216ENST00000555002 SLFN5Q08AF3 891 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 FAM180AQ6UWF9 173 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 IQUBQ8NA54 791 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 ANLNQ9NQW6 1124 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 MBD4O95243 580 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 ARHGAP44Q17R89 818 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 PIK3AP1Q6ZUJ8 805 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 CCDC13Q8IYE1 715 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 ZCRB1Q8TBF4 217 aaKnown RBP7.6□□□□□ -1.19
SYNE2-216ENST00000555002 NAPGQ99747 312 aaPredicted RBP7.6□□□□□ -1.19
SYNE2-216ENST00000555002 MUM1Q2TAK8 710 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 UVSSAQ2YD98 709 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 TPH2Q8IWU9 490 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 SLC5A4Q9NY91 659 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 FAM8A1Q9UBU6 413 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 PRKAG2Q9UGJ0 569 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 MAGED2Q9UNF1 606 aaPredicted RBP7.6□□□□□ -1.19
SYNE2-216ENST00000555002 IRS4O14654 1257 aaPredicted RBP7.6□□□□□ -1.19
SYNE2-216ENST00000555002 ATF7P17544 494 aaPredicted RBP7.6□□□□□ -1.19
SYNE2-216ENST00000555002 PDE4DQ08499 809 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 IQCB1Q15051 598 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 TPTE2Q6XPS3 522 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 LSM14BQ9BX40 385 aaKnown RBP7.6□□□□□ -1.19
SYNE2-216ENST00000555002 ZBBXA8MT70 800 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 SERPINB6P35237 376 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 MCUQ8NE86 351 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 ZNF653Q96CK0 615 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 LRGUKQ96M69 825 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 PLCB1Q9NQ66 1216 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 SUCLA2Q9P2R7 463 aaPredicted RBP7.6□□□□□ -1.19
SYNE2-216ENST00000555002 IGSF3O75054 1194 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 BLVRAP53004 296 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 IGBP1P78318 339 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 FGD4Q96M96 766 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms