RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 Q3C1V9 767 aa9.51□□□□□ -0.89
ABCD4-220ENST00000553998 POTEEQ6S8J3 1075 aa9.51□□□□□ -0.89
ABCD4-220ENST00000553998 DZIP1Q86YF9 867 aaKnown RBP9.51□□□□□ -0.89
ABCD4-220ENST00000553998 ITPRIPQ8IWB1 547 aa9.51□□□□□ -0.89
ABCD4-220ENST00000553998 PANK1Q8TE04 598 aa9.51□□□□□ -0.89
ABCD4-220ENST00000553998 AS3MTQ9HBK9 375 aa9.51□□□□□ -0.89
ABCD4-220ENST00000553998 COPRSQ9NQ92 184 aa9.51□□□□□ -0.89
ABCD4-220ENST00000553998 PRDM6Q9NQX0 595 aa9.51□□□□□ -0.89
ABCD4-220ENST00000553998 GINM1Q9NU53 330 aa9.51□□□□□ -0.89
ABCD4-220ENST00000553998 DDX19BQ9UMR2 479 aa9.51□□□□□ -0.89
ABCD4-220ENST00000553998 PRUNE2Q8WUY3 3088 aa9.51□□□□□ -0.89
ABCD4-220ENST00000553998 LDHCP07864 332 aa9.5□□□□□ -0.89
ABCD4-220ENST00000553998 ZKSCAN1P17029 563 aaPredicted RBP9.5□□□□□ -0.89
ABCD4-220ENST00000553998 CCND3P30281 292 aaPredicted RBP9.5□□□□□ -0.89
ABCD4-220ENST00000553998 ADORA1P30542 326 aa9.5□□□□□ -0.89
ABCD4-220ENST00000553998 RGS2P41220 211 aa9.5□□□□□ -0.89
ABCD4-220ENST00000553998 HERVK_113P62684 666 aa9.5□□□□□ -0.89
ABCD4-220ENST00000553998 GTF3C2Q8WUA4 911 aaPredicted RBP9.5□□□□□ -0.89
ABCD4-220ENST00000553998 NSUN4Q96CB9 384 aaKnown RBP9.5□□□□□ -0.89
ABCD4-220ENST00000553998 MEIS3Q99687 375 aa9.5□□□□□ -0.89
ABCD4-220ENST00000553998 SEMA6BQ9H3T3 888 aa9.5□□□□□ -0.89
ABCD4-220ENST00000553998 ABCF2Q9UG63 623 aa9.5□□□□□ -0.89
ABCD4-220ENST00000553998 AK9Q5TCS8 1911 aa9.5□□□□□ -0.89
ABCD4-220ENST00000553998 PHIPQ8WWQ0 1821 aa9.49□□□□□ -0.89
ABCD4-220ENST00000553998 FAM196BA6NMK8 535 aa9.49□□□□□ -0.89
ABCD4-220ENST00000553998 GNAI2P04899 355 aa9.49□□□□□ -0.89
ABCD4-220ENST00000553998 ASNSP08243 561 aa9.49□□□□□ -0.89
ABCD4-220ENST00000553998 TIMM10P62072 90 aa9.49□□□□□ -0.89
ABCD4-220ENST00000553998 ERVK-9P63128 1117 aa9.49□□□□□ -0.89
ABCD4-220ENST00000553998 ERVK-24P63145 666 aa9.49□□□□□ -0.89
ABCD4-220ENST00000553998 IRX3P78415 501 aaPredicted RBP9.49□□□□□ -0.89
ABCD4-220ENST00000553998 JAG1P78504 1218 aa9.49□□□□□ -0.89
ABCD4-220ENST00000553998 CCL14Q16627 93 aa9.49□□□□□ -0.89
ABCD4-220ENST00000553998 ZNF697Q5TEC3 545 aa9.49□□□□□ -0.89
ABCD4-220ENST00000553998 ERICH6Q7L0X2 663 aa9.49□□□□□ -0.89
ABCD4-220ENST00000553998 GPR142Q7Z601 462 aa9.49□□□□□ -0.89
ABCD4-220ENST00000553998 PLEKHH3Q7Z736 793 aa9.49□□□□□ -0.89
ABCD4-220ENST00000553998 CDX2Q99626 313 aaPredicted RBP9.49□□□□□ -0.89
ABCD4-220ENST00000553998 APBA2Q99767 749 aa9.49□□□□□ -0.89
ABCD4-220ENST00000553998 SIL1Q9H173 461 aa9.49□□□□□ -0.89
ABCD4-220ENST00000553998 PORCNQ9H237 461 aa9.49□□□□□ -0.89
ABCD4-220ENST00000553998 DHX36Q9H2U1 1008 aaKnown RBP9.49□□□□□ -0.89
ABCD4-220ENST00000553998 PI4KBQ9UBF8 816 aa9.49□□□□□ -0.89
ABCD4-220ENST00000553998 COG6Q9Y2V7 657 aa9.49□□□□□ -0.89
ABCD4-220ENST00000553998 SUPT16HQ9Y5B9 1047 aaKnown RBP9.49□□□□□ -0.89
ABCD4-220ENST00000553998 USP17L10C9JJH3 530 aa9.48□□□□□ -0.89
ABCD4-220ENST00000553998 MSCO60682 206 aa9.48□□□□□ -0.89
ABCD4-220ENST00000553998 PEX10O60683 326 aa9.48□□□□□ -0.89
ABCD4-220ENST00000553998 HOXC6P09630 235 aa9.48□□□□□ -0.89
ABCD4-220ENST00000553998 GSTO1P78417 241 aa9.48□□□□□ -0.89
ABCD4-220ENST00000553998 MAP2K5Q13163 448 aa9.48□□□□□ -0.89
ABCD4-220ENST00000553998 MTMR2Q13614 643 aa9.48□□□□□ -0.89
ABCD4-220ENST00000553998 C20orf194Q5TEA3 1177 aa9.48□□□□□ -0.89
ABCD4-220ENST00000553998 FOXP4Q8IVH2 680 aaPredicted RBP9.48□□□□□ -0.89
ABCD4-220ENST00000553998 LPAR1Q92633 364 aa9.48□□□□□ -0.89
ABCD4-220ENST00000553998 EDC3Q96F86 508 aaKnown RBP9.48□□□□□ -0.89
ABCD4-220ENST00000553998 LBHD1Q9BQE6 289 aaPredicted RBP9.48□□□□□ -0.89
ABCD4-220ENST00000553998 SENP6Q9GZR1 1112 aaPredicted RBP9.48□□□□□ -0.89
ABCD4-220ENST00000553998 TMOD4Q9NZQ9 345 aa9.48□□□□□ -0.89
ABCD4-220ENST00000553998 HMG20BQ9P0W2 317 aa9.48□□□□□ -0.89
ABCD4-220ENST00000553998 AKAP2Q9Y2D5 859 aa9.48□□□□□ -0.89
ABCD4-220ENST00000553998 PTPRFP10586 1907 aa9.48□□□□□ -0.89
ABCD4-220ENST00000553998 DOCK3Q8IZD9 2030 aa9.48□□□□□ -0.89
ABCD4-220ENST00000553998 DDX60LQ5H9U9 1706 aaKnown RBP9.48□□□□□ -0.89
ABCD4-220ENST00000553998 LOC285556D6RIA3 1793 aa9.47□□□□□ -0.89
ABCD4-220ENST00000553998 TTC28Q96AY4 2481 aa9.47□□□□□ -0.89
ABCD4-220ENST00000553998 DOCK1Q14185 1865 aa9.47□□□□□ -0.89
ABCD4-220ENST00000553998 A0A1B0GUL7 405 aa9.47□□□□□ -0.89
ABCD4-220ENST00000553998 DNM1LO00429 736 aa9.47□□□□□ -0.89
ABCD4-220ENST00000553998 IGSF3O75054 1194 aa9.47□□□□□ -0.89
ABCD4-220ENST00000553998 CNMDO75829 334 aa9.47□□□□□ -0.89
ABCD4-220ENST00000553998 PPP4CP60510 307 aa9.47□□□□□ -0.89
ABCD4-220ENST00000553998 SMAD3P84022 425 aaKnown RBP9.47□□□□□ -0.89
ABCD4-220ENST00000553998 MTX1Q13505 466 aa9.47□□□□□ -0.89
ABCD4-220ENST00000553998 AAMPQ13685 434 aa9.47□□□□□ -0.89
ABCD4-220ENST00000553998 LBX2Q6XYB7 198 aa9.47□□□□□ -0.89
ABCD4-220ENST00000553998 XAGE2Q96GT9 111 aa9.47□□□□□ -0.89
ABCD4-220ENST00000553998 C12orf42Q96LP6 360 aa9.47□□□□□ -0.89
ABCD4-220ENST00000553998 FAM161BQ96MY7 647 aa9.47□□□□□ -0.89
ABCD4-220ENST00000553998 DNAJC18Q9H819 358 aa9.47□□□□□ -0.89
ABCD4-220ENST00000553998 EMILIN3Q9NT22 766 aa9.47□□□□□ -0.89
ABCD4-220ENST00000553998 ZBTB40Q9NUA8 1239 aa9.47□□□□□ -0.89
ABCD4-220ENST00000553998 FLRT1Q9NZU1 646 aa9.47□□□□□ -0.89
ABCD4-220ENST00000553998 DDX20Q9UHI6 824 aaKnown RBP9.47□□□□□ -0.89
ABCD4-220ENST00000553998 PA2G4Q9UQ80 394 aaKnown RBP9.47□□□□□ -0.89
ABCD4-220ENST00000553998 RABGAP1Q9Y3P9 1069 aa9.47□□□□□ -0.89
ABCD4-220ENST00000553998 PLXNB2O15031 1838 aa9.47□□□□□ -0.89
ABCD4-220ENST00000553998 DOCK2Q92608 1830 aa9.47□□□□□ -0.89
ABCD4-220ENST00000553998 MYH2Q9UKX2 1941 aa9.46□□□□□ -0.89
ABCD4-220ENST00000553998 SLC15A5A6NIM6 579 aa9.46□□□□□ -0.9
ABCD4-220ENST00000553998 PTPREP23469 700 aa9.46□□□□□ -0.9
ABCD4-220ENST00000553998 ARID4AP29374 1257 aaPredicted RBP9.46□□□□□ -0.9
ABCD4-220ENST00000553998 SNX17Q15036 470 aa9.46□□□□□ -0.9
ABCD4-220ENST00000553998 SHHQ15465 462 aa9.46□□□□□ -0.9
ABCD4-220ENST00000553998 C1orf53Q5VUE5 145 aa9.46□□□□□ -0.9
ABCD4-220ENST00000553998 MFSD14CQ5VZR4 134 aa9.46□□□□□ -0.9
ABCD4-220ENST00000553998 SPATA5Q8NB90 893 aa9.46□□□□□ -0.9
ABCD4-220ENST00000553998 MAFAQ8NHW3 353 aaPredicted RBP9.46□□□□□ -0.9
ABCD4-220ENST00000553998 SYMPKQ92797 1274 aaKnown RBP9.46□□□□□ -0.9
ABCD4-220ENST00000553998 TTYH1Q9H313 450 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms