RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 GTF3C2Q8WUA4 911 aaPredicted RBP21.76■■□□□ 1.07
SYNE2-211ENST00000553801 DLL1O00548 723 aa21.75■■□□□ 1.07
SYNE2-211ENST00000553801 IGSF3O75054 1194 aa21.75■■□□□ 1.07
SYNE2-211ENST00000553801 MAPK4P31152 587 aa21.75■■□□□ 1.07
SYNE2-211ENST00000553801 CCDC158Q5M9N0 1113 aa21.75■■□□□ 1.07
SYNE2-211ENST00000553801 TTC39AQ5SRH9 613 aa21.75■■□□□ 1.07
SYNE2-211ENST00000553801 MAP3K21Q5TCX8 1036 aa21.75■■□□□ 1.07
SYNE2-211ENST00000553801 METTL16Q86W50 562 aaKnown RBP21.75■■□□□ 1.07
SYNE2-211ENST00000553801 TGFBRAP1Q8WUH2 860 aa21.75■■□□□ 1.07
SYNE2-211ENST00000553801 PRKAR2AP13861 404 aaKnown RBP21.74■■□□□ 1.07
SYNE2-211ENST00000553801 MNX1P50219 401 aaPredicted RBP21.74■■□□□ 1.07
SYNE2-211ENST00000553801 ATF7IPQ6VMQ6 1270 aa21.74■■□□□ 1.07
SYNE2-211ENST00000553801 MAPKAPK5Q8IW41 473 aa21.74■■□□□ 1.07
SYNE2-211ENST00000553801 GPR108Q9NPR9 543 aa21.74■■□□□ 1.07
SYNE2-211ENST00000553801 PNMA6EA0A0J9YXQ4 647 aa21.73■■□□□ 1.07
SYNE2-211ENST00000553801 HLA-DOAP06340 250 aa21.73■■□□□ 1.07
SYNE2-211ENST00000553801 ZKSCAN1P17029 563 aaPredicted RBP21.73■■□□□ 1.07
SYNE2-211ENST00000553801 TXNRD2Q9NNW7 524 aa21.73■■□□□ 1.07
SYNE2-211ENST00000553801 SNRKQ9NRH2 765 aa21.73■■□□□ 1.07
SYNE2-211ENST00000553801 PLXNB2O15031 1838 aa21.73■■□□□ 1.07
SYNE2-211ENST00000553801 DDX60LQ5H9U9 1706 aaKnown RBP21.72■■□□□ 1.07
SYNE2-211ENST00000553801 SYN1P17600 705 aa21.72■■□□□ 1.07
SYNE2-211ENST00000553801 RGS2P41220 211 aa21.72■■□□□ 1.07
SYNE2-211ENST00000553801 ERVK-9P63128 1117 aa21.72■■□□□ 1.07
SYNE2-211ENST00000553801 ERVK-24P63145 666 aa21.72■■□□□ 1.07
SYNE2-211ENST00000553801 LRIT3Q3SXY7 679 aa21.72■■□□□ 1.07
SYNE2-211ENST00000553801 RBPJLQ9UBG7 517 aa21.72■■□□□ 1.07
SYNE2-211ENST00000553801 PALD1Q9ULE6 856 aa21.72■■□□□ 1.07
SYNE2-211ENST00000553801 ZBTB21Q9ULJ3 1066 aa21.72■■□□□ 1.07
SYNE2-211ENST00000553801 FLT1P17948 1338 aa21.72■■□□□ 1.07
SYNE2-211ENST00000553801 GDF11O95390 407 aa21.71■■□□□ 1.07
SYNE2-211ENST00000553801 TRIM27P14373 513 aa21.71■■□□□ 1.07
SYNE2-211ENST00000553801 MAGEA10P43363 369 aaPredicted RBP21.71■■□□□ 1.07
SYNE2-211ENST00000553801 USP17L2Q6R6M4 530 aa21.71■■□□□ 1.07
SYNE2-211ENST00000553801 TDHQ8IZJ6 230 aa21.71■■□□□ 1.07
SYNE2-211ENST00000553801 DNAJC18Q9H819 358 aa21.71■■□□□ 1.07
SYNE2-211ENST00000553801 CWC22Q9HCG8 908 aaKnown RBP21.71■■□□□ 1.07
SYNE2-211ENST00000553801 JAG1P78504 1218 aa21.7■■□□□ 1.06
SYNE2-211ENST00000553801 CACNB2Q08289 660 aaPredicted RBP21.7■■□□□ 1.06
SYNE2-211ENST00000553801 OS9Q13438 667 aaPredicted RBP21.7■■□□□ 1.06
SYNE2-211ENST00000553801 TNNI3KQ59H18 835 aa21.7■■□□□ 1.06
SYNE2-211ENST00000553801 GPR142Q7Z601 462 aa21.7■■□□□ 1.06
SYNE2-211ENST00000553801 PLEKHH3Q7Z736 793 aa21.7■■□□□ 1.06
SYNE2-211ENST00000553801 DEFB123Q8N688 67 aa21.7■■□□□ 1.06
SYNE2-211ENST00000553801 USP6NLQ92738 828 aa21.7■■□□□ 1.06
SYNE2-211ENST00000553801 PAGR1Q9BTK6 254 aa21.7■■□□□ 1.06
SYNE2-211ENST00000553801 FPGT-TNNI3KV9GXZ4 949 aa21.7■■□□□ 1.06
SYNE2-211ENST00000553801 SIPA1L1O43166 1804 aa21.7■■□□□ 1.06
SYNE2-211ENST00000553801 PEX10O60683 326 aa21.69■■□□□ 1.06
SYNE2-211ENST00000553801 CYP2E1P05181 493 aaPredicted RBP21.69■■□□□ 1.06
SYNE2-211ENST00000553801 Q3C1V9 767 aa21.69■■□□□ 1.06
SYNE2-211ENST00000553801 FRAT1Q92837 279 aaPredicted RBP21.69■■□□□ 1.06
SYNE2-211ENST00000553801 ZNF512BQ96KM6 892 aaPredicted RBP21.69■■□□□ 1.06
SYNE2-211ENST00000553801 DBNDD2Q9BQY9 259 aa21.69■■□□□ 1.06
SYNE2-211ENST00000553801 UBE2OQ9C0C9 1292 aaKnown RBP21.69■■□□□ 1.06
SYNE2-211ENST00000553801 MAST2Q6P0Q8 1798 aa21.69■■□□□ 1.06
SYNE2-211ENST00000553801 GLRX3O76003 335 aaKnown RBP21.68■■□□□ 1.06
SYNE2-211ENST00000553801 CCNA1P78396 465 aa21.68■■□□□ 1.06
SYNE2-211ENST00000553801 MORN1Q5T089 497 aa21.68■■□□□ 1.06
SYNE2-211ENST00000553801 ADGRA1Q86SQ6 560 aa21.68■■□□□ 1.06
SYNE2-211ENST00000553801 CERS3Q8IU89 383 aa21.68■■□□□ 1.06
SYNE2-211ENST00000553801 APBA2Q99767 749 aa21.68■■□□□ 1.06
SYNE2-211ENST00000553801 PORCNQ9H237 461 aa21.68■■□□□ 1.06
SYNE2-211ENST00000553801 EMILIN3Q9NT22 766 aa21.68■■□□□ 1.06
SYNE2-211ENST00000553801 SAP30BPQ9UHR5 308 aaKnown RBP21.68■■□□□ 1.06
SYNE2-211ENST00000553801 PFASO15067 1338 aa21.68■■□□□ 1.06
SYNE2-211ENST00000553801 CDK5RAP2Q96SN8 1893 aa21.67■■□□□ 1.06
SYNE2-211ENST00000553801 COL6A1P12109 1028 aa21.67■■□□□ 1.06
SYNE2-211ENST00000553801 RABGAP1Q9Y3P9 1069 aa21.67■■□□□ 1.06
SYNE2-211ENST00000553801 FOCADQ5VW36 1801 aa21.66■■□□□ 1.06
SYNE2-211ENST00000553801 USP17L15C9J2P7 530 aa21.66■■□□□ 1.06
SYNE2-211ENST00000553801 USP17L13C9JLJ4 530 aa21.66■■□□□ 1.06
SYNE2-211ENST00000553801 USP17L11C9JVI0 530 aa21.66■■□□□ 1.06
SYNE2-211ENST00000553801 USP17L18D6R9N7 530 aa21.66■■□□□ 1.06
SYNE2-211ENST00000553801 USP17L22D6RA61 530 aa21.66■■□□□ 1.06
SYNE2-211ENST00000553801 USP17L17D6RBQ6 530 aa21.66■■□□□ 1.06
SYNE2-211ENST00000553801 USP17L19D6RCP7 530 aa21.66■■□□□ 1.06
SYNE2-211ENST00000553801 USP17L20D6RJB6 530 aa21.66■■□□□ 1.06
SYNE2-211ENST00000553801 CYP7A1P22680 504 aa21.66■■□□□ 1.06
SYNE2-211ENST00000553801 CCND3P30281 292 aaPredicted RBP21.66■■□□□ 1.06
SYNE2-211ENST00000553801 USP17L24Q0WX57 530 aa21.66■■□□□ 1.06
SYNE2-211ENST00000553801 POLA2Q14181 598 aa21.66■■□□□ 1.06
SYNE2-211ENST00000553801 SHROOM1Q2M3G4 852 aaPredicted RBP21.66■■□□□ 1.06
SYNE2-211ENST00000553801 LHX8Q68G74 356 aa21.66■■□□□ 1.06
SYNE2-211ENST00000553801 CLUAP1Q96AJ1 413 aa21.66■■□□□ 1.06
SYNE2-211ENST00000553801 C12orf42Q96LP6 360 aa21.66■■□□□ 1.06
SYNE2-211ENST00000553801 FEZ1Q99689 392 aa21.66■■□□□ 1.06
SYNE2-211ENST00000553801 LAMA3Q16787 3333 aa21.66■■□□□ 1.06
SYNE2-211ENST00000553801 GH2P01242 217 aa21.65■■□□□ 1.06
SYNE2-211ENST00000553801 ZAP70P43403 619 aa21.65■■□□□ 1.06
SYNE2-211ENST00000553801 USP14P54578 494 aa21.65■■□□□ 1.06
SYNE2-211ENST00000553801 ATP8B2P98198 1209 aa21.65■■□□□ 1.06
SYNE2-211ENST00000553801 MAP2K5Q13163 448 aa21.65■■□□□ 1.06
SYNE2-211ENST00000553801 CCL14Q16627 93 aa21.65■■□□□ 1.06
SYNE2-211ENST00000553801 MFSD14CQ5VZR4 134 aa21.65■■□□□ 1.06
SYNE2-211ENST00000553801 SSH3Q8TE77 659 aa21.65■■□□□ 1.06
SYNE2-211ENST00000553801 EDC3Q96F86 508 aaKnown RBP21.65■■□□□ 1.06
SYNE2-211ENST00000553801 STXBP5LQ9Y2K9 1186 aa21.65■■□□□ 1.06
SYNE2-211ENST00000553801 SURF6O75683 361 aaKnown RBP21.64■■□□□ 1.05
SYNE2-211ENST00000553801 USP5P45974 858 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms