RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 NUDT12Q9BQG2 462 aa10.54□□□□□ -0.72
CDK4-213ENST00000552713 PORCNQ9H237 461 aa10.54□□□□□ -0.72
CDK4-213ENST00000552713 RBPJLQ9UBG7 517 aa10.54□□□□□ -0.72
CDK4-213ENST00000552713 ZNF521Q96K83 1311 aa10.54□□□□□ -0.72
CDK4-213ENST00000552713 XRCC5P13010 732 aaKnown RBP10.53□□□□□ -0.72
CDK4-213ENST00000552713 IL15P40933 162 aaPredicted RBP10.53□□□□□ -0.72
CDK4-213ENST00000552713 PABPC4Q13310 644 aaKnown RBP eCLIP10.53□□□□□ -0.722e-8■□□□□ 9.2
CDK4-213ENST00000552713 ERICH6Q7L0X2 663 aa10.53□□□□□ -0.72
CDK4-213ENST00000552713 FBXO3Q9UK99 471 aa10.53□□□□□ -0.72
CDK4-213ENST00000552713 ZKSCAN1P17029 563 aaPredicted RBP10.52□□□□□ -0.73
CDK4-213ENST00000552713 HOXA7P31268 230 aaPredicted RBP10.52□□□□□ -0.73
CDK4-213ENST00000552713 BACE1P56817 501 aa10.52□□□□□ -0.73
CDK4-213ENST00000552713 HERVK_113P62684 666 aa10.52□□□□□ -0.73
CDK4-213ENST00000552713 IRX3P78415 501 aaPredicted RBP10.52□□□□□ -0.73
CDK4-213ENST00000552713 MORN1Q5T089 497 aa10.52□□□□□ -0.73
CDK4-213ENST00000552713 FAM109BQ6ICB4 259 aaPredicted RBP10.52□□□□□ -0.73
CDK4-213ENST00000552713 SLF2Q8IX21 1173 aa10.52□□□□□ -0.73
CDK4-213ENST00000552713 GPRC5AQ8NFJ5 357 aa10.52□□□□□ -0.73
CDK4-213ENST00000552713 NSUN4Q96CB9 384 aaKnown RBP10.52□□□□□ -0.73
CDK4-213ENST00000552713 XAGE2Q96GT9 111 aa10.52□□□□□ -0.73
CDK4-213ENST00000552713 DNAJC18Q9H819 358 aa10.52□□□□□ -0.73
CDK4-213ENST00000552713 FLRT1Q9NZU1 646 aa10.52□□□□□ -0.73
CDK4-213ENST00000552713 HMG20BQ9P0W2 317 aa10.52□□□□□ -0.73
CDK4-213ENST00000552713 PDS5AQ29RF7 1337 aaKnown RBP10.52□□□□□ -0.73
CDK4-213ENST00000552713 A0A1B0GUL7 405 aa10.51□□□□□ -0.73
CDK4-213ENST00000552713 PRR29P0C7W0 189 aa10.51□□□□□ -0.73
CDK4-213ENST00000552713 UBTFL1P0CB47 393 aaPredicted RBP10.51□□□□□ -0.73
CDK4-213ENST00000552713 CD44P16070 742 aaKnown RBP10.51□□□□□ -0.73
CDK4-213ENST00000552713 ERVK-9P63128 1117 aa10.51□□□□□ -0.73
CDK4-213ENST00000552713 ERVK-24P63145 666 aa10.51□□□□□ -0.73
CDK4-213ENST00000552713 TFCP2Q12800 502 aa10.51□□□□□ -0.73
CDK4-213ENST00000552713 SPTY2D1Q68D10 685 aaPredicted RBP10.51□□□□□ -0.73
CDK4-213ENST00000552713 GPR142Q7Z601 462 aa10.51□□□□□ -0.73
CDK4-213ENST00000552713 FAM9BQ8IZU0 186 aa10.51□□□□□ -0.73
CDK4-213ENST00000552713 SH3RF3Q8TEJ3 882 aaPredicted RBP10.51□□□□□ -0.73
CDK4-213ENST00000552713 SOCS4Q8WXH5 440 aa10.51□□□□□ -0.73
CDK4-213ENST00000552713 CDX2Q99626 313 aaPredicted RBP10.51□□□□□ -0.73
CDK4-213ENST00000552713 PAGR1Q9BTK6 254 aa10.51□□□□□ -0.73
CDK4-213ENST00000552713 WDR18Q9BV38 432 aa10.51□□□□□ -0.73
CDK4-213ENST00000552713 TBC1D2Q9BYX2 928 aa10.51□□□□□ -0.73
CDK4-213ENST00000552713 SENP6Q9GZR1 1112 aaPredicted RBP10.51□□□□□ -0.73
CDK4-213ENST00000552713 COPRSQ9NQ92 184 aa10.51□□□□□ -0.73
CDK4-213ENST00000552713 NDUFB9Q9Y6M9 179 aa10.51□□□□□ -0.73
CDK4-213ENST00000552713 EYSQ5T1H1 3165 aa10.5□□□□□ -0.73
CDK4-213ENST00000552713 CNMDO75829 334 aa10.5□□□□□ -0.73
CDK4-213ENST00000552713 GDF11O95390 407 aa10.5□□□□□ -0.73
CDK4-213ENST00000552713 MAPK4P31152 587 aa10.5□□□□□ -0.73
CDK4-213ENST00000552713 ATN1P54259 1190 aaPredicted RBP10.5□□□□□ -0.73
CDK4-213ENST00000552713 TEX11Q8IYF3 940 aa10.5□□□□□ -0.73
CDK4-213ENST00000552713 AS3MTQ9HBK9 375 aa10.5□□□□□ -0.73
CDK4-213ENST00000552713 EMILIN3Q9NT22 766 aa10.5□□□□□ -0.73
CDK4-213ENST00000552713 DNAH12Q6ZR08 3092 aa10.5□□□□□ -0.73
CDK4-213ENST00000552713 VCANP13611 3396 aa10.49□□□□□ -0.73
CDK4-213ENST00000552713 RGS2P41220 211 aa10.49□□□□□ -0.73
CDK4-213ENST00000552713 PDE3AQ14432 1141 aa10.49□□□□□ -0.73
CDK4-213ENST00000552713 SHHQ15465 462 aa10.49□□□□□ -0.73
CDK4-213ENST00000552713 C9orf50Q5SZB4 431 aa10.49□□□□□ -0.73
CDK4-213ENST00000552713 ZNF697Q5TEC3 545 aa10.49□□□□□ -0.73
CDK4-213ENST00000552713 PLEKHH3Q7Z736 793 aa10.49□□□□□ -0.73
CDK4-213ENST00000552713 SPATA5Q8NB90 893 aa10.49□□□□□ -0.73
CDK4-213ENST00000552713 TRPV1Q8NER1 839 aa10.49□□□□□ -0.73
CDK4-213ENST00000552713 MEIS3Q99687 375 aa10.49□□□□□ -0.73
CDK4-213ENST00000552713 APBA2Q99767 749 aa10.49□□□□□ -0.73
CDK4-213ENST00000552713 SEMA6BQ9H3T3 888 aa10.49□□□□□ -0.73
CDK4-213ENST00000552713 TMOD4Q9NZQ9 345 aa10.49□□□□□ -0.73
CDK4-213ENST00000552713 RAI14Q9P0K7 980 aa10.49□□□□□ -0.73
CDK4-213ENST00000552713 HERC5Q9UII4 1024 aaKnown RBP10.49□□□□□ -0.73
CDK4-213ENST00000552713 LAMA2P24043 3122 aaKnown RBP10.49□□□□□ -0.73
CDK4-213ENST00000552713 PRUNE2Q8WUY3 3088 aa10.49□□□□□ -0.73
CDK4-213ENST00000552713 TTC28Q96AY4 2481 aa10.48□□□□□ -0.73
CDK4-213ENST00000552713 C19orf81C9J6K1 198 aa10.48□□□□□ -0.73
CDK4-213ENST00000552713 USP17L10C9JJH3 530 aa10.48□□□□□ -0.73
CDK4-213ENST00000552713 LDHCP07864 332 aa10.48□□□□□ -0.73
CDK4-213ENST00000552713 MCAMP43121 646 aa10.48□□□□□ -0.73
CDK4-213ENST00000552713 RTP1P59025 263 aa10.48□□□□□ -0.73
CDK4-213ENST00000552713 MAP2K5Q13163 448 aa10.48□□□□□ -0.73
CDK4-213ENST00000552713 MVPQ14764 893 aaKnown RBP10.48□□□□□ -0.73
CDK4-213ENST00000552713 ADGRA1Q86SQ6 560 aa10.48□□□□□ -0.73
CDK4-213ENST00000552713 MAPKAPK5Q8IW41 473 aa10.48□□□□□ -0.73
CDK4-213ENST00000552713 TRMT44Q8IYL2 757 aaKnown RBP10.48□□□□□ -0.73
CDK4-213ENST00000552713 MAFAQ8NHW3 353 aaPredicted RBP10.48□□□□□ -0.73
CDK4-213ENST00000552713 NPLOC4Q8TAT6 608 aa10.48□□□□□ -0.73
CDK4-213ENST00000552713 NEUROD6Q96NK8 337 aa10.48□□□□□ -0.73
CDK4-213ENST00000552713 LBHD1Q9BQE6 289 aaPredicted RBP10.48□□□□□ -0.73
CDK4-213ENST00000552713 TTYH1Q9H313 450 aaPredicted RBP10.48□□□□□ -0.73
CDK4-213ENST00000552713 AATFQ9NY61 560 aaKnown RBP eCLIP10.48□□□□□ -0.73
CDK4-213ENST00000552713 PI4KBQ9UBF8 816 aa10.48□□□□□ -0.73
CDK4-213ENST00000552713 PALD1Q9ULE6 856 aa10.48□□□□□ -0.73
CDK4-213ENST00000552713 COL11A1P12107 1806 aaPredicted RBP10.47□□□□□ -0.73
CDK4-213ENST00000552713 PARP14Q460N5 1801 aa10.47□□□□□ -0.73
CDK4-213ENST00000552713 MAP4K4O95819 1239 aaPredicted RBP10.47□□□□□ -0.73
CDK4-213ENST00000552713 ASNSP08243 561 aa10.47□□□□□ -0.73
CDK4-213ENST00000552713 ARID4AP29374 1257 aaPredicted RBP10.47□□□□□ -0.73
CDK4-213ENST00000552713 GSTO1P78417 241 aa10.47□□□□□ -0.73
CDK4-213ENST00000552713 METTL16Q86W50 562 aaKnown RBP10.47□□□□□ -0.73
CDK4-213ENST00000552713 TGFBRAP1Q8WUH2 860 aa10.47□□□□□ -0.73
CDK4-213ENST00000552713 MYLIPQ8WY64 445 aa10.47□□□□□ -0.73
CDK4-213ENST00000552713 EDC3Q96F86 508 aaKnown RBP10.47□□□□□ -0.73
CDK4-213ENST00000552713 PRDM6Q9NQX0 595 aa10.47□□□□□ -0.73
CDK4-213ENST00000552713 DDX20Q9UHI6 824 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms