RNA–Protein interactions for RNA: ENST00000546983.1

NKX2-1-205, Transcript of NK2 homeobox 1, humanhuman

TSL 4

Gene NKX2-1, Length 653 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-205ENST00000546983 CNKSR2Q8WXI2 1034 aa30.39■■■□□ 2.46
NKX2-1-205ENST00000546983 NAPBQ9H115 298 aa30.39■■■□□ 2.46
NKX2-1-205ENST00000546983 PPP4R2Q9NY27 417 aa30.39■■■□□ 2.46
NKX2-1-205ENST00000546983 NAV1Q8NEY1 1877 aa30.39■■■□□ 2.46
NKX2-1-205ENST00000546983 TRPA1O75762 1119 aa30.38■■■□□ 2.45
NKX2-1-205ENST00000546983 IFNL3Q8IZI9 196 aa30.38■■■□□ 2.45
NKX2-1-205ENST00000546983 ZNF280CQ8ND82 737 aa30.38■■■□□ 2.45
NKX2-1-205ENST00000546983 WDR18Q9BV38 432 aa30.38■■■□□ 2.45
NKX2-1-205ENST00000546983 DDX60LQ5H9U9 1706 aaKnown RBP30.38■■■□□ 2.45
NKX2-1-205ENST00000546983 LAMB1P07942 1786 aa30.38■■■□□ 2.45
NKX2-1-205ENST00000546983 ABCB5Q2M3G0 1257 aa30.37■■■□□ 2.45
NKX2-1-205ENST00000546983 SLC4A8Q2Y0W8 1093 aa30.37■■■□□ 2.45
NKX2-1-205ENST00000546983 C16orf86Q6ZW13 317 aa30.37■■■□□ 2.45
NKX2-1-205ENST00000546983 SEC62Q99442 399 aaKnown RBP30.37■■■□□ 2.45
NKX2-1-205ENST00000546983 ZBTB21Q9ULJ3 1066 aa30.37■■■□□ 2.45
NKX2-1-205ENST00000546983 ALX1Q15699 326 aa30.36■■■□□ 2.45
NKX2-1-205ENST00000546983 ANKRD23Q86SG2 305 aa30.36■■■□□ 2.45
NKX2-1-205ENST00000546983 DOCK1Q14185 1865 aa30.36■■■□□ 2.45
NKX2-1-205ENST00000546983 A0A0G2JLL6 359 aaPredicted RBP30.35■■■□□ 2.45
NKX2-1-205ENST00000546983 C19orf81C9J6K1 198 aa30.35■■■□□ 2.45
NKX2-1-205ENST00000546983 HSPA8P11142 646 aaKnown RBP30.35■■■□□ 2.45
NKX2-1-205ENST00000546983 SHMT1P34896 483 aa30.35■■■□□ 2.45
NKX2-1-205ENST00000546983 NMIQ13287 307 aaPredicted RBP30.35■■■□□ 2.45
NKX2-1-205ENST00000546983 PRRT2Q7Z6L0 340 aaPredicted RBP30.35■■■□□ 2.45
NKX2-1-205ENST00000546983 BRI3BPQ8WY22 251 aa30.35■■■□□ 2.45
NKX2-1-205ENST00000546983 SLC45A1Q9Y2W3 748 aa30.35■■■□□ 2.45
NKX2-1-205ENST00000546983 CCDC171Q6TFL3 1326 aa30.35■■■□□ 2.45
NKX2-1-205ENST00000546983 ROBO3Q96MS0 1386 aa30.34■■■□□ 2.45
NKX2-1-205ENST00000546983 ZMYM6O95789 1325 aa30.34■■■□□ 2.45
NKX2-1-205ENST00000546983 RAD50Q92878 1312 aa30.34■■■□□ 2.45
NKX2-1-205ENST00000546983 PROCA1Q8NCQ7 364 aaPredicted RBP30.34■■■□□ 2.45
NKX2-1-205ENST00000546983 FAM227BQ96M60 508 aa30.34■■■□□ 2.45
NKX2-1-205ENST00000546983 A0A0D9SFI3 127 aa30.33■■■□□ 2.45
NKX2-1-205ENST00000546983 CDK8P49336 464 aa30.33■■■□□ 2.45
NKX2-1-205ENST00000546983 PDE4BQ07343 736 aa30.33■■■□□ 2.45
NKX2-1-205ENST00000546983 PABPC4Q13310 644 aaKnown RBP eCLIP30.33■■■□□ 2.45
NKX2-1-205ENST00000546983 TMEM179Q6ZVK1 233 aa30.33■■■□□ 2.45
NKX2-1-205ENST00000546983 ZFYVE28Q9HCC9 887 aa30.33■■■□□ 2.45
NKX2-1-205ENST00000546983 IGF2BP3O00425 579 aaKnown RBP eCLIP30.32■■■□□ 2.44
NKX2-1-205ENST00000546983 GH2P01242 217 aa30.32■■■□□ 2.44
NKX2-1-205ENST00000546983 GSPT1P15170 499 aaKnown RBP30.32■■■□□ 2.44
NKX2-1-205ENST00000546983 MKNK2Q9HBH9 465 aa30.32■■■□□ 2.44
NKX2-1-205ENST00000546983 SIPA1L1O43166 1804 aa30.31■■■□□ 2.44
NKX2-1-205ENST00000546983 TRIM75PA6NK02 468 aa30.31■■■□□ 2.44
NKX2-1-205ENST00000546983 MINDY4BA8MYZ0 360 aa30.31■■■□□ 2.44
NKX2-1-205ENST00000546983 USP17L10C9JJH3 530 aa30.31■■■□□ 2.44
NKX2-1-205ENST00000546983 GDF11O95390 407 aa30.31■■■□□ 2.44
NKX2-1-205ENST00000546983 SLURP2P0DP57 97 aa30.31■■■□□ 2.44
NKX2-1-205ENST00000546983 CYP2D6P10635 497 aa30.31■■■□□ 2.44
NKX2-1-205ENST00000546983 NT5C2P49902 561 aa30.31■■■□□ 2.44
NKX2-1-205ENST00000546983 LBX1P52954 281 aa30.31■■■□□ 2.44
NKX2-1-205ENST00000546983 USP14P54578 494 aa30.31■■■□□ 2.44
NKX2-1-205ENST00000546983 SPP2Q13103 211 aa30.31■■■□□ 2.44
NKX2-1-205ENST00000546983 SH3D19Q5HYK7 790 aa30.31■■■□□ 2.44
NKX2-1-205ENST00000546983 CWC27Q6UX04 472 aaKnown RBP30.31■■■□□ 2.44
NKX2-1-205ENST00000546983 PTPN18Q99952 460 aa30.31■■■□□ 2.44
NKX2-1-205ENST00000546983 EPB41L4AQ9HCS5 686 aaPredicted RBP30.31■■■□□ 2.44
NKX2-1-205ENST00000546983 TMOD4Q9NZQ9 345 aa30.31■■■□□ 2.44
NKX2-1-205ENST00000546983 BACE1P56817 501 aa30.3■■■□□ 2.44
NKX2-1-205ENST00000546983 RRP1BQ14684 758 aaKnown RBP30.3■■■□□ 2.44
NKX2-1-205ENST00000546983 TAF1CQ15572 869 aaPredicted RBP30.3■■■□□ 2.44
NKX2-1-205ENST00000546983 SH2D4AQ9H788 454 aa30.3■■■□□ 2.44
NKX2-1-205ENST00000546983 MPHOSPH10O00566 681 aaKnown RBP30.29■■■□□ 2.44
NKX2-1-205ENST00000546983 BMP2KLQ5H9B9 411 aa30.29■■■□□ 2.44
NKX2-1-205ENST00000546983 PPP4R3BQ5MIZ7 849 aa30.29■■■□□ 2.44
NKX2-1-205ENST00000546983 PNMA3Q9UL41 463 aa30.29■■■□□ 2.44
NKX2-1-205ENST00000546983 BTBD19C9JJ37 291 aa30.28■■■□□ 2.44
NKX2-1-205ENST00000546983 HSPD1P10809 573 aaKnown RBP30.28■■■□□ 2.44
NKX2-1-205ENST00000546983 PCP11498 1178 aaKnown RBP30.28■■■□□ 2.44
NKX2-1-205ENST00000546983 RAB3GAP1Q15042 981 aa30.28■■■□□ 2.44
NKX2-1-205ENST00000546983 CCDC129Q6ZRS4 1044 aa30.28■■■□□ 2.44
NKX2-1-205ENST00000546983 DYNLL2Q96FJ2 89 aa30.28■■■□□ 2.44
NKX2-1-205ENST00000546983 PARK7Q99497 189 aaKnown RBP30.28■■■□□ 2.44
NKX2-1-205ENST00000546983 CTNNA3Q9UI47 895 aa30.28■■■□□ 2.44
NKX2-1-205ENST00000546983 PCNTO95613 3336 aa30.27■■■□□ 2.44
NKX2-1-205ENST00000546983 PPARAQ07869 468 aa30.27■■■□□ 2.44
NKX2-1-205ENST00000546983 ZNF444Q8N0Y2 327 aaPredicted RBP30.27■■■□□ 2.44
NKX2-1-205ENST00000546983 ANAPC4Q9UJX5 808 aa30.27■■■□□ 2.44
NKX2-1-205ENST00000546983 AGTPBP1Q9UPW5 1226 aa30.27■■■□□ 2.44
NKX2-1-205ENST00000546983 CYP2D7A0A087X1C5 515 aa30.26■■■□□ 2.43
NKX2-1-205ENST00000546983 ARHGEF6Q15052 776 aa30.26■■■□□ 2.43
NKX2-1-205ENST00000546983 GADL1Q6ZQY3 521 aa30.26■■■□□ 2.43
NKX2-1-205ENST00000546983 FAM43AQ8N2R8 423 aa30.26■■■□□ 2.43
NKX2-1-205ENST00000546983 FEZ1Q99689 392 aa30.26■■■□□ 2.43
NKX2-1-205ENST00000546983 DSCC1Q9BVC3 393 aa30.26■■■□□ 2.43
NKX2-1-205ENST00000546983 KANSL2Q9H9L4 492 aa30.26■■■□□ 2.43
NKX2-1-205ENST00000546983 ARHGEF10LQ9HCE6 1279 aa30.26■■■□□ 2.43
NKX2-1-205ENST00000546983 PDHXO00330 501 aa30.25■■■□□ 2.43
NKX2-1-205ENST00000546983 TBC1D8O95759 1140 aa30.25■■■□□ 2.43
NKX2-1-205ENST00000546983 USP17L2Q6R6M4 530 aa30.25■■■□□ 2.43
NKX2-1-205ENST00000546983 CASC1Q6TDU7 716 aa30.25■■■□□ 2.43
NKX2-1-205ENST00000546983 KIAA1683Q9H0B3 1180 aa30.25■■■□□ 2.43
NKX2-1-205ENST00000546983 GPR25O00155 361 aa30.24■■■□□ 2.43
NKX2-1-205ENST00000546983 CHMLP26374 656 aa30.24■■■□□ 2.43
NKX2-1-205ENST00000546983 ZNF589Q86UQ0 364 aaPredicted RBP30.24■■■□□ 2.43
NKX2-1-205ENST00000546983 TLR2O60603 784 aa30.23■■■□□ 2.43
NKX2-1-205ENST00000546983 FGAP02671 866 aa30.23■■■□□ 2.43
NKX2-1-205ENST00000546983 CRHR2Q13324 411 aa30.23■■■□□ 2.43
NKX2-1-205ENST00000546983 MTMR2Q13614 643 aa30.23■■■□□ 2.43
NKX2-1-205ENST00000546983 MOGSQ13724 837 aa30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms