RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 SOGA3Q5TF21 947 aa10.18□□□□□ -0.78
TRAV11-201ENST00000539512 OVOS1Q6IE37 1185 aa10.18□□□□□ -0.78
TRAV11-201ENST00000539512 BEND4Q6ZU67 534 aa10.18□□□□□ -0.78
TRAV11-201ENST00000539512 MCATQ8IVS2 390 aaKnown RBP10.18□□□□□ -0.78
TRAV11-201ENST00000539512 MRPL41Q8IXM3 137 aaKnown RBP10.18□□□□□ -0.78
TRAV11-201ENST00000539512 ACSF2Q96CM8 615 aaPredicted RBP10.18□□□□□ -0.78
TRAV11-201ENST00000539512 TM9SF2Q99805 663 aa10.18□□□□□ -0.78
TRAV11-201ENST00000539512 SEMA6CQ9H3T2 930 aa10.18□□□□□ -0.78
TRAV11-201ENST00000539512 FBRSQ9HAH7 460 aa10.18□□□□□ -0.78
TRAV11-201ENST00000539512 TJP2Q9UDY2 1190 aa10.18□□□□□ -0.78
TRAV11-201ENST00000539512 LRIG2O94898 1065 aa10.17□□□□□ -0.78
TRAV11-201ENST00000539512 NTF4P34130 210 aa10.17□□□□□ -0.78
TRAV11-201ENST00000539512 PPP2R5EQ16537 467 aa10.17□□□□□ -0.78
TRAV11-201ENST00000539512 ARSHQ5FYA8 562 aa10.17□□□□□ -0.78
TRAV11-201ENST00000539512 ARMCX6Q7L4S7 300 aa10.17□□□□□ -0.78
TRAV11-201ENST00000539512 NLRC3Q7RTR2 1065 aa10.17□□□□□ -0.78
TRAV11-201ENST00000539512 LSRQ86X29 649 aaPredicted RBP10.17□□□□□ -0.78
TRAV11-201ENST00000539512 ARMC10Q8N2F6 343 aa10.17□□□□□ -0.78
TRAV11-201ENST00000539512 RBBP8NLQ8NC74 664 aaPredicted RBP10.17□□□□□ -0.78
TRAV11-201ENST00000539512 SHDQ96IW2 340 aa10.17□□□□□ -0.78
TRAV11-201ENST00000539512 DNAJC2Q99543 621 aaKnown RBP10.17□□□□□ -0.78
TRAV11-201ENST00000539512 TRIM55Q9BYV6 548 aa10.17□□□□□ -0.78
TRAV11-201ENST00000539512 FOXQ1Q9C009 403 aa10.17□□□□□ -0.78
TRAV11-201ENST00000539512 ZNF408Q9H9D4 720 aa10.17□□□□□ -0.78
TRAV11-201ENST00000539512 STOML1Q9UBI4 398 aa10.17□□□□□ -0.78
TRAV11-201ENST00000539512 SLC22A31A6NKX4 558 aa10.16□□□□□ -0.78
TRAV11-201ENST00000539512 MEIS3P2A8K0S8 358 aa10.16□□□□□ -0.78
TRAV11-201ENST00000539512 U2SURPO15042 1029 aaKnown RBP10.16□□□□□ -0.78
TRAV11-201ENST00000539512 PRAMEF13Q5VWM6 474 aa10.16□□□□□ -0.78
TRAV11-201ENST00000539512 CLEC10AQ8IUN9 316 aa10.16□□□□□ -0.78
TRAV11-201ENST00000539512 MFSD2AQ8NA29 543 aa10.16□□□□□ -0.78
TRAV11-201ENST00000539512 XAGE3Q8WTP9 111 aa10.16□□□□□ -0.78
TRAV11-201ENST00000539512 EZH1Q92800 747 aaPredicted RBP10.16□□□□□ -0.78
TRAV11-201ENST00000539512 DPH2Q9BQC3 489 aaPredicted RBP10.16□□□□□ -0.78
TRAV11-201ENST00000539512 PRKAG3Q9UGI9 489 aa10.16□□□□□ -0.78
TRAV11-201ENST00000539512 CST3P01034 146 aaPredicted RBP10.15□□□□□ -0.78
TRAV11-201ENST00000539512 GBP1P32455 592 aa10.15□□□□□ -0.78
TRAV11-201ENST00000539512 ANTXR1Q9H6X2 564 aa10.15□□□□□ -0.78
TRAV11-201ENST00000539512 SLC12A7Q9Y666 1083 aa10.15□□□□□ -0.78
TRAV11-201ENST00000539512 CHURC1-FNTBB4DL54 471 aa10.14□□□□□ -0.79
TRAV11-201ENST00000539512 SMAD7O15105 426 aaKnown RBP10.14□□□□□ -0.79
TRAV11-201ENST00000539512 ETFBP38117 255 aa10.14□□□□□ -0.79
TRAV11-201ENST00000539512 CAP2P40123 477 aa10.14□□□□□ -0.79
TRAV11-201ENST00000539512 SLBPQ14493 270 aaKnown RBP eCLIP10.14□□□□□ -0.79
TRAV11-201ENST00000539512 NKG7Q16617 165 aa10.14□□□□□ -0.79
TRAV11-201ENST00000539512 PLA2G4EQ3MJ16 856 aa10.14□□□□□ -0.79
TRAV11-201ENST00000539512 ANKS3Q6ZW76 656 aa10.14□□□□□ -0.79
TRAV11-201ENST00000539512 SLFN12Q8IYM2 578 aa10.14□□□□□ -0.79
TRAV11-201ENST00000539512 PMFBP1Q8TBY8 1022 aa10.14□□□□□ -0.79
TRAV11-201ENST00000539512 ATG4CQ96DT6 458 aa10.14□□□□□ -0.79
TRAV11-201ENST00000539512 CNNM2Q9H8M5 875 aa10.14□□□□□ -0.79
TRAV11-201ENST00000539512 ACTR10Q9NZ32 417 aa10.14□□□□□ -0.79
TRAV11-201ENST00000539512 RAXQ9Y2V3 346 aa10.14□□□□□ -0.79
TRAV11-201ENST00000539512 UPK3BL1B0FP48 263 aa10.13□□□□□ -0.79
TRAV11-201ENST00000539512 UPK3BL2E5RIL1 263 aa10.13□□□□□ -0.79
TRAV11-201ENST00000539512 GUCY2CP25092 1073 aa10.13□□□□□ -0.79
TRAV11-201ENST00000539512 CDCP2Q5VXM1 449 aa10.13□□□□□ -0.79
TRAV11-201ENST00000539512 UBE3DQ7Z6J8 389 aa10.13□□□□□ -0.79
TRAV11-201ENST00000539512 CCDC74BQ96LY2 380 aa10.13□□□□□ -0.79
TRAV11-201ENST00000539512 MIPEPQ99797 713 aa10.13□□□□□ -0.79
TRAV11-201ENST00000539512 FAM83CQ9BQN1 747 aa10.13□□□□□ -0.79
TRAV11-201ENST00000539512 NME1P15531 152 aaKnown RBP10.12□□□□□ -0.79
TRAV11-201ENST00000539512 C19orf47Q8N9M1 422 aaKnown RBP10.12□□□□□ -0.79
TRAV11-201ENST00000539512 CYB5D2Q8WUJ1 264 aa10.12□□□□□ -0.79
TRAV11-201ENST00000539512 SSBP4Q9BWG4 385 aaPredicted RBP10.12□□□□□ -0.79
TRAV11-201ENST00000539512 IGSF3O75054 1194 aa10.11□□□□□ -0.79
TRAV11-201ENST00000539512 CDK5R2Q13319 367 aa10.11□□□□□ -0.79
TRAV11-201ENST00000539512 ZNF746Q6NUN9 644 aaPredicted RBP10.11□□□□□ -0.79
TRAV11-201ENST00000539512 RUFY4Q6ZNE9 571 aa10.11□□□□□ -0.79
TRAV11-201ENST00000539512 TAB3Q8N5C8 712 aaPredicted RBP10.11□□□□□ -0.79
TRAV11-201ENST00000539512 KIF2CQ99661 725 aa10.11□□□□□ -0.79
TRAV11-201ENST00000539512 PRDM10Q9NQV6 1147 aa10.11□□□□□ -0.79
TRAV11-201ENST00000539512 FAM86C2PA6NEL3 165 aa10.1□□□□□ -0.79
TRAV11-201ENST00000539512 DNAJA2O60884 412 aa10.1□□□□□ -0.79
TRAV11-201ENST00000539512 NBPF6Q5VWK0 638 aa10.1□□□□□ -0.79
TRAV11-201ENST00000539512 LARP1BQ659C4 914 aaKnown RBP10.1□□□□□ -0.79
TRAV11-201ENST00000539512 TOP6BLQ8N6T0 577 aa10.1□□□□□ -0.79
TRAV11-201ENST00000539512 DHRS1Q96LJ7 313 aa10.1□□□□□ -0.79
TRAV11-201ENST00000539512 NBPF4Q96M43 638 aa10.1□□□□□ -0.79
TRAV11-201ENST00000539512 TBC1D32Q96NH3 1257 aa10.1□□□□□ -0.79
TRAV11-201ENST00000539512 C7orf69Q9H7B7 122 aa10.1□□□□□ -0.79
TRAV11-201ENST00000539512 HMX2A2RU54 273 aa10.09□□□□□ -0.79
TRAV11-201ENST00000539512 CCNFP41002 786 aa10.09□□□□□ -0.79
TRAV11-201ENST00000539512 ETV3P41162 512 aa10.09□□□□□ -0.79
TRAV11-201ENST00000539512 INTS3Q68E01 1043 aaKnown RBP10.09□□□□□ -0.79
TRAV11-201ENST00000539512 LETMD1Q6P1Q0 360 aa10.09□□□□□ -0.79
TRAV11-201ENST00000539512 PRR23CQ6ZRP0 262 aa10.09□□□□□ -0.79
TRAV11-201ENST00000539512 TTC6Q86TZ1 520 aa10.09□□□□□ -0.79
TRAV11-201ENST00000539512 HNRNPLLQ8WVV9 542 aaKnown RBP10.09□□□□□ -0.79
TRAV11-201ENST00000539512 TPSG1Q9NRR2 321 aa10.09□□□□□ -0.79
TRAV11-201ENST00000539512 TPX2Q9ULW0 747 aaKnown RBP10.09□□□□□ -0.79
TRAV11-201ENST00000539512 TNFRSF10CO14798 259 aa10.08□□□□□ -0.8
TRAV11-201ENST00000539512 RGS13O14921 159 aa10.08□□□□□ -0.8
TRAV11-201ENST00000539512 DYNC1LI2O43237 492 aaPredicted RBP10.08□□□□□ -0.8
TRAV11-201ENST00000539512 CYP7A1P22680 504 aa10.08□□□□□ -0.8
TRAV11-201ENST00000539512 RBL2Q08999 1139 aa10.08□□□□□ -0.8
TRAV11-201ENST00000539512 FXNQ16595 210 aa10.08□□□□□ -0.8
TRAV11-201ENST00000539512 FAM169BQ8N8A8 192 aa10.08□□□□□ -0.8
TRAV11-201ENST00000539512 FAM87AP0C7U9 286 aa10.07□□□□□ -0.8
TRAV11-201ENST00000539512 POLR2BP30876 1174 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms