RNA–Protein interactions for RNA: ENST00000533487.1

VPS51-211, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-211ENST00000533487 USP17L5A8MUK1 530 aa25.03■■□□□ 1.6
VPS51-211ENST00000533487 SLC3A2P08195 630 aaKnown RBP25.03■■□□□ 1.6
VPS51-211ENST00000533487 CERKLQ49MI3 558 aaPredicted RBP25.03■■□□□ 1.6
VPS51-211ENST00000533487 C16orf86Q6ZW13 317 aa25.03■■□□□ 1.6
VPS51-211ENST00000533487 MS4A4AQ96JQ5 239 aa25.03■■□□□ 1.6
VPS51-211ENST00000533487 CABP5Q9NP86 173 aa25.03■■□□□ 1.6
VPS51-211ENST00000533487 IRF6O14896 467 aa25.02■■□□□ 1.6
VPS51-211ENST00000533487 SHMT1P34896 483 aa25.02■■□□□ 1.6
VPS51-211ENST00000533487 ZIC5Q96T25 663 aa25.02■■□□□ 1.6
VPS51-211ENST00000533487 EPB41L4AQ9HCS5 686 aaPredicted RBP25.02■■□□□ 1.6
VPS51-211ENST00000533487 ZHX2Q9Y6X8 837 aa25.02■■□□□ 1.6
VPS51-211ENST00000533487 PTPRFP10586 1907 aa25.02■■□□□ 1.6
VPS51-211ENST00000533487 HSPA1AP0DMV8 641 aaKnown RBP25.01■■□□□ 1.59
VPS51-211ENST00000533487 HSPA1BP0DMV9 641 aaKnown RBP25.01■■□□□ 1.59
VPS51-211ENST00000533487 CWC27Q6UX04 472 aaKnown RBP25.01■■□□□ 1.59
VPS51-211ENST00000533487 WDR18Q9BV38 432 aa25.01■■□□□ 1.59
VPS51-211ENST00000533487 CFHR5Q9BXR6 569 aa25.01■■□□□ 1.59
VPS51-211ENST00000533487 AFG3L2Q9Y4W6 797 aa25.01■■□□□ 1.59
VPS51-211ENST00000533487 MKRN3Q13064 507 aaKnown RBP25■■□□□ 1.59
VPS51-211ENST00000533487 SLC4A8Q2Y0W8 1093 aa25■■□□□ 1.59
VPS51-211ENST00000533487 ZBTB21Q9ULJ3 1066 aa25■■□□□ 1.59
VPS51-211ENST00000533487 SLURP2P0DP57 97 aa24.99■■□□□ 1.59
VPS51-211ENST00000533487 HSPD1P10809 573 aaKnown RBP24.99■■□□□ 1.59
VPS51-211ENST00000533487 ABCB5Q2M3G0 1257 aa24.99■■□□□ 1.59
VPS51-211ENST00000533487 CCDC129Q6ZRS4 1044 aa24.99■■□□□ 1.59
VPS51-211ENST00000533487 FASTKD5Q7L8L6 764 aaKnown RBP24.99■■□□□ 1.59
VPS51-211ENST00000533487 IFNL1Q8IU54 200 aa24.99■■□□□ 1.59
VPS51-211ENST00000533487 ZNF280CQ8ND82 737 aa24.99■■□□□ 1.59
VPS51-211ENST00000533487 CNKSR2Q8WXI2 1034 aa24.99■■□□□ 1.59
VPS51-211ENST00000533487 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.99■■□□□ 1.59
VPS51-211ENST00000533487 CCL15-CCL14A0A0B4J2E2 113 aa24.98■■□□□ 1.59
VPS51-211ENST00000533487 MINDY4BA8MYZ0 360 aa24.98■■□□□ 1.59
VPS51-211ENST00000533487 CYP2D6P10635 497 aa24.98■■□□□ 1.59
VPS51-211ENST00000533487 CHMLP26374 656 aa24.98■■□□□ 1.59
VPS51-211ENST00000533487 CDK8P49336 464 aa24.98■■□□□ 1.59
VPS51-211ENST00000533487 CTCFP49711 727 aaPredicted RBP24.98■■□□□ 1.59
VPS51-211ENST00000533487 NT5C2P49902 561 aa24.98■■□□□ 1.59
VPS51-211ENST00000533487 PDE4BQ07343 736 aa24.98■■□□□ 1.59
VPS51-211ENST00000533487 RRP1BQ14684 758 aaKnown RBP24.98■■□□□ 1.59
VPS51-211ENST00000533487 CCL15Q16663 113 aa24.98■■□□□ 1.59
VPS51-211ENST00000533487 DSCC1Q9BVC3 393 aa24.98■■□□□ 1.59
VPS51-211ENST00000533487 ANAPC4Q9UJX5 808 aa24.98■■□□□ 1.59
VPS51-211ENST00000533487 A0A0G2JLL6 359 aaPredicted RBP24.97■■□□□ 1.59
VPS51-211ENST00000533487 NOM1Q5C9Z4 860 aaKnown RBP24.97■■□□□ 1.59
VPS51-211ENST00000533487 TMEM179Q6ZVK1 233 aa24.97■■□□□ 1.59
VPS51-211ENST00000533487 PRRT2Q7Z6L0 340 aaPredicted RBP24.97■■□□□ 1.59
VPS51-211ENST00000533487 ZNF589Q86UQ0 364 aaPredicted RBP24.97■■□□□ 1.59
VPS51-211ENST00000533487 RNF186Q9NXI6 227 aa24.97■■□□□ 1.59
VPS51-211ENST00000533487 C19orf81C9J6K1 198 aa24.96■■□□□ 1.59
VPS51-211ENST00000533487 FOXP2O15409 715 aa24.96■■□□□ 1.59
VPS51-211ENST00000533487 PCP11498 1178 aaKnown RBP24.96■■□□□ 1.59
VPS51-211ENST00000533487 PPARAQ07869 468 aa24.96■■□□□ 1.59
VPS51-211ENST00000533487 PROCA1Q8NCQ7 364 aaPredicted RBP24.96■■□□□ 1.59
VPS51-211ENST00000533487 BRI3BPQ8WY22 251 aa24.96■■□□□ 1.59
VPS51-211ENST00000533487 CYP2D7A0A087X1C5 515 aa24.95■■□□□ 1.58
VPS51-211ENST00000533487 GDF11O95390 407 aa24.95■■□□□ 1.58
VPS51-211ENST00000533487 GH2P01242 217 aa24.95■■□□□ 1.58
VPS51-211ENST00000533487 FGAP02671 866 aa24.95■■□□□ 1.58
VPS51-211ENST00000533487 ANKRD23Q86SG2 305 aa24.95■■□□□ 1.58
VPS51-211ENST00000533487 DYNLL2Q96FJ2 89 aa24.95■■□□□ 1.58
VPS51-211ENST00000533487 MKNK2Q9HBH9 465 aa24.95■■□□□ 1.58
VPS51-211ENST00000533487 CTNNA3Q9UI47 895 aa24.95■■□□□ 1.58
VPS51-211ENST00000533487 SLC45A1Q9Y2W3 748 aa24.95■■□□□ 1.58
VPS51-211ENST00000533487 LOC285556D6RIA3 1793 aa24.95■■□□□ 1.58
VPS51-211ENST00000533487 SH3D19Q5HYK7 790 aa24.94■■□□□ 1.58
VPS51-211ENST00000533487 VPS53Q5VIR6 699 aa24.94■■□□□ 1.58
VPS51-211ENST00000533487 CASC1Q6TDU7 716 aa24.94■■□□□ 1.58
VPS51-211ENST00000533487 LAMA4Q16363 1823 aa24.93■■□□□ 1.58
VPS51-211ENST00000533487 GREB1LQ9C091 1923 aaPredicted RBP24.93■■□□□ 1.58
VPS51-211ENST00000533487 USP17L10C9JJH3 530 aa24.93■■□□□ 1.58
VPS51-211ENST00000533487 BACE1P56817 501 aa24.93■■□□□ 1.58
VPS51-211ENST00000533487 SPP2Q13103 211 aa24.93■■□□□ 1.58
VPS51-211ENST00000533487 IGF2BP3O00425 579 aaKnown RBP eCLIP24.92■■□□□ 1.58
VPS51-211ENST00000533487 SGSM2O43147 1006 aa24.92■■□□□ 1.58
VPS51-211ENST00000533487 TRPA1O75762 1119 aa24.92■■□□□ 1.58
VPS51-211ENST00000533487 USP14P54578 494 aa24.92■■□□□ 1.58
VPS51-211ENST00000533487 PPP4R3BQ5MIZ7 849 aa24.92■■□□□ 1.58
VPS51-211ENST00000533487 ZNF444Q8N0Y2 327 aaPredicted RBP24.92■■□□□ 1.58
VPS51-211ENST00000533487 SLC44A5Q8NCS7 719 aa24.92■■□□□ 1.58
VPS51-211ENST00000533487 PTPN18Q99952 460 aa24.92■■□□□ 1.58
VPS51-211ENST00000533487 SH2D4AQ9H788 454 aa24.92■■□□□ 1.58
VPS51-211ENST00000533487 PCNTO95613 3336 aa24.91■■□□□ 1.58
VPS51-211ENST00000533487 TRIM75PA6NK02 468 aa24.91■■□□□ 1.58
VPS51-211ENST00000533487 MPHOSPH10O00566 681 aaKnown RBP24.91■■□□□ 1.58
VPS51-211ENST00000533487 FOXN1O15353 648 aa24.91■■□□□ 1.58
VPS51-211ENST00000533487 FGRP09769 529 aa24.91■■□□□ 1.58
VPS51-211ENST00000533487 EVX2Q03828 476 aa24.91■■□□□ 1.58
VPS51-211ENST00000533487 PABPC4Q13310 644 aaKnown RBP eCLIP24.91■■□□□ 1.58
VPS51-211ENST00000533487 RAB3GAP1Q15042 981 aa24.91■■□□□ 1.58
VPS51-211ENST00000533487 KANSL2Q9H9L4 492 aa24.91■■□□□ 1.58
VPS51-211ENST00000533487 PRDM10Q9NQV6 1147 aa24.91■■□□□ 1.58
VPS51-211ENST00000533487 RASA1P20936 1047 aa24.9■■□□□ 1.58
VPS51-211ENST00000533487 JAG1P78504 1218 aa24.9■■□□□ 1.58
VPS51-211ENST00000533487 KIAA1683Q9H0B3 1180 aa24.9■■□□□ 1.58
VPS51-211ENST00000533487 RNF41Q9H4P4 317 aaPredicted RBP24.9■■□□□ 1.58
VPS51-211ENST00000533487 TMOD4Q9NZQ9 345 aa24.9■■□□□ 1.58
VPS51-211ENST00000533487 BTBD19C9JJ37 291 aa24.89■■□□□ 1.58
VPS51-211ENST00000533487 HSPA8P11142 646 aaKnown RBP24.89■■□□□ 1.58
VPS51-211ENST00000533487 MOGSQ13724 837 aa24.89■■□□□ 1.58
VPS51-211ENST00000533487 USP17L2Q6R6M4 530 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms