RNA–Protein interactions for RNA: ENST00000530402.1

VPS26B-205, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-205ENST00000530402 PAOXQ6QHF9 649 aa9.21□□□□□ -0.94
VPS26B-205ENST00000530402 UBE3DQ7Z6J8 389 aa9.21□□□□□ -0.94
VPS26B-205ENST00000530402 MCATQ8IVS2 390 aaKnown RBP9.21□□□□□ -0.94
VPS26B-205ENST00000530402 OR6P1Q8NGX9 317 aa9.21□□□□□ -0.94
VPS26B-205ENST00000530402 UBXN4Q92575 508 aa9.21□□□□□ -0.94
VPS26B-205ENST00000530402 DPH2Q9BQC3 489 aaPredicted RBP9.21□□□□□ -0.94
VPS26B-205ENST00000530402 R3HCC1Q9Y3T6 440 aaKnown RBP9.21□□□□□ -0.94
VPS26B-205ENST00000530402 SLC22A31A6NKX4 558 aa9.2□□□□□ -0.94
VPS26B-205ENST00000530402 CHURC1-FNTBB4DL54 471 aa9.2□□□□□ -0.94
VPS26B-205ENST00000530402 ETFBP38117 255 aa9.2□□□□□ -0.94
VPS26B-205ENST00000530402 GIPRP48546 466 aa9.2□□□□□ -0.94
VPS26B-205ENST00000530402 ARSHQ5FYA8 562 aa9.2□□□□□ -0.94
VPS26B-205ENST00000530402 OVOS1Q6IE37 1185 aa9.2□□□□□ -0.94
VPS26B-205ENST00000530402 MRPL41Q8IXM3 137 aaKnown RBP9.2□□□□□ -0.94
VPS26B-205ENST00000530402 PHACTR4Q8IZ21 702 aa9.2□□□□□ -0.94
VPS26B-205ENST00000530402 XAGE3Q8WTP9 111 aa9.2□□□□□ -0.94
VPS26B-205ENST00000530402 TMEM40Q8WWA1 233 aa9.2□□□□□ -0.94
VPS26B-205ENST00000530402 SHDQ96IW2 340 aa9.2□□□□□ -0.94
VPS26B-205ENST00000530402 ZNF408Q9H9D4 720 aa9.2□□□□□ -0.94
VPS26B-205ENST00000530402 RAG1P15918 1043 aa9.19□□□□□ -0.94
VPS26B-205ENST00000530402 GSK3AP49840 483 aa9.19□□□□□ -0.94
VPS26B-205ENST00000530402 PPP2R5EQ16537 467 aa9.19□□□□□ -0.94
VPS26B-205ENST00000530402 PRAMEF13Q5VWM6 474 aa9.19□□□□□ -0.94
VPS26B-205ENST00000530402 LSRQ86X29 649 aaPredicted RBP9.19□□□□□ -0.94
VPS26B-205ENST00000530402 CLEC10AQ8IUN9 316 aa9.19□□□□□ -0.94
VPS26B-205ENST00000530402 EZH1Q92800 747 aaPredicted RBP9.19□□□□□ -0.94
VPS26B-205ENST00000530402 SSBP4Q9BWG4 385 aaPredicted RBP9.19□□□□□ -0.94
VPS26B-205ENST00000530402 FOXQ1Q9C009 403 aa9.19□□□□□ -0.94
VPS26B-205ENST00000530402 STOML1Q9UBI4 398 aa9.19□□□□□ -0.94
VPS26B-205ENST00000530402 DNAJA2O60884 412 aa9.18□□□□□ -0.94
VPS26B-205ENST00000530402 LRIG2O94898 1065 aa9.18□□□□□ -0.94
VPS26B-205ENST00000530402 SLBPQ14493 270 aaKnown RBP eCLIP9.18□□□□□ -0.94
VPS26B-205ENST00000530402 ARMCX6Q7L4S7 300 aa9.18□□□□□ -0.94
VPS26B-205ENST00000530402 NLRC3Q7RTR2 1065 aa9.18□□□□□ -0.94
VPS26B-205ENST00000530402 CKAP2LQ8IYA6 745 aa9.18□□□□□ -0.94
VPS26B-205ENST00000530402 RBBP8NLQ8NC74 664 aaPredicted RBP9.18□□□□□ -0.94
VPS26B-205ENST00000530402 ARMC5Q96C12 935 aa9.18□□□□□ -0.94
VPS26B-205ENST00000530402 ATG4CQ96DT6 458 aa9.18□□□□□ -0.94
VPS26B-205ENST00000530402 DNAJC2Q99543 621 aaKnown RBP9.18□□□□□ -0.94
VPS26B-205ENST00000530402 HIRIP3Q9BW71 556 aaPredicted RBP9.18□□□□□ -0.94
VPS26B-205ENST00000530402 RAXQ9Y2V3 346 aa9.18□□□□□ -0.94
VPS26B-205ENST00000530402 MEIS3P2A8K0S8 358 aa9.17□□□□□ -0.94
VPS26B-205ENST00000530402 DYNC1LI2O43237 492 aaPredicted RBP9.17□□□□□ -0.94
VPS26B-205ENST00000530402 IGSF3O75054 1194 aa9.17□□□□□ -0.94
VPS26B-205ENST00000530402 CST3P01034 146 aaPredicted RBP9.17□□□□□ -0.94
VPS26B-205ENST00000530402 CHMP4BP1P59074 171 aa9.17□□□□□ -0.94
VPS26B-205ENST00000530402 TNNI3KQ59H18 835 aa9.17□□□□□ -0.94
VPS26B-205ENST00000530402 RUFY4Q6ZNE9 571 aa9.17□□□□□ -0.94
VPS26B-205ENST00000530402 TM9SF2Q99805 663 aa9.17□□□□□ -0.94
VPS26B-205ENST00000530402 SMAD7O15105 426 aaKnown RBP9.16□□□□□ -0.94
VPS26B-205ENST00000530402 NME1P15531 152 aaKnown RBP9.16□□□□□ -0.94
VPS26B-205ENST00000530402 GBP1P32455 592 aa9.16□□□□□ -0.94
VPS26B-205ENST00000530402 CAP2P40123 477 aa9.16□□□□□ -0.94
VPS26B-205ENST00000530402 CDK5R2Q13319 367 aa9.16□□□□□ -0.94
VPS26B-205ENST00000530402 ANKS3Q6ZW76 656 aa9.16□□□□□ -0.94
VPS26B-205ENST00000530402 SLFN12Q8IYM2 578 aa9.16□□□□□ -0.94
VPS26B-205ENST00000530402 MFSD2AQ8NA29 543 aa9.16□□□□□ -0.94
VPS26B-205ENST00000530402 GIMAP7Q8NHV1 300 aa9.16□□□□□ -0.94
VPS26B-205ENST00000530402 PMFBP1Q8TBY8 1022 aa9.16□□□□□ -0.94
VPS26B-205ENST00000530402 FAM83CQ9BQN1 747 aa9.16□□□□□ -0.94
VPS26B-205ENST00000530402 TPSG1Q9NRR2 321 aa9.16□□□□□ -0.94
VPS26B-205ENST00000530402 PRKAG3Q9UGI9 489 aa9.16□□□□□ -0.94
VPS26B-205ENST00000530402 HMX2A2RU54 273 aa9.15□□□□□ -0.94
VPS26B-205ENST00000530402 FAM86C2PA6NEL3 165 aa9.15□□□□□ -0.94
VPS26B-205ENST00000530402 GUCY2CP25092 1073 aa9.15□□□□□ -0.94
VPS26B-205ENST00000530402 CDCP2Q5VXM1 449 aa9.15□□□□□ -0.94
VPS26B-205ENST00000530402 FAM169BQ8N8A8 192 aa9.15□□□□□ -0.94
VPS26B-205ENST00000530402 CCDC74BQ96LY2 380 aa9.15□□□□□ -0.94
VPS26B-205ENST00000530402 CNNM2Q9H8M5 875 aa9.15□□□□□ -0.94
VPS26B-205ENST00000530402 DOC2BQ14184 412 aa9.14□□□□□ -0.95
VPS26B-205ENST00000530402 PRR23CQ6ZRP0 262 aa9.14□□□□□ -0.95
VPS26B-205ENST00000530402 TBC1D32Q96NH3 1257 aa9.14□□□□□ -0.95
VPS26B-205ENST00000530402 KIF2CQ99661 725 aa9.14□□□□□ -0.95
VPS26B-205ENST00000530402 MIPEPQ99797 713 aa9.14□□□□□ -0.95
VPS26B-205ENST00000530402 TRIM55Q9BYV6 548 aa9.14□□□□□ -0.95
VPS26B-205ENST00000530402 C7orf69Q9H7B7 122 aa9.14□□□□□ -0.95
VPS26B-205ENST00000530402 ACTR10Q9NZ32 417 aa9.14□□□□□ -0.95
VPS26B-205ENST00000530402 SOGA3Q5TF21 947 aa9.13□□□□□ -0.95
VPS26B-205ENST00000530402 TOP6BLQ8N6T0 577 aa9.13□□□□□ -0.95
VPS26B-205ENST00000530402 CYB5D2Q8WUJ1 264 aa9.13□□□□□ -0.95
VPS26B-205ENST00000530402 HNRNPLLQ8WVV9 542 aaKnown RBP9.13□□□□□ -0.95
VPS26B-205ENST00000530402 PRDM10Q9NQV6 1147 aa9.13□□□□□ -0.95
VPS26B-205ENST00000530402 CCDC180Q9P1Z9 1646 aa9.13□□□□□ -0.95
VPS26B-205ENST00000530402 U2SURPO15042 1029 aaKnown RBP9.12□□□□□ -0.95
VPS26B-205ENST00000530402 ITGB2P05107 769 aa9.12□□□□□ -0.95
VPS26B-205ENST00000530402 POLR2BP30876 1174 aaKnown RBP9.12□□□□□ -0.95
VPS26B-205ENST00000530402 INTS3Q68E01 1043 aaKnown RBP9.12□□□□□ -0.95
VPS26B-205ENST00000530402 LETMD1Q6P1Q0 360 aa9.12□□□□□ -0.95
VPS26B-205ENST00000530402 SEZ6L2Q6UXD5 910 aa9.12□□□□□ -0.95
VPS26B-205ENST00000530402 TTC6Q86TZ1 520 aa9.12□□□□□ -0.95
VPS26B-205ENST00000530402 FBXL6Q8N531 539 aa9.12□□□□□ -0.95
VPS26B-205ENST00000530402 BAHD1Q8TBE0 780 aaPredicted RBP9.12□□□□□ -0.95
VPS26B-205ENST00000530402 SLC9A7Q96T83 725 aa9.12□□□□□ -0.95
VPS26B-205ENST00000530402 C1GALT1Q9NS00 363 aa9.12□□□□□ -0.95
VPS26B-205ENST00000530402 MSTNO14793 375 aa9.11□□□□□ -0.95
VPS26B-205ENST00000530402 TNFRSF10CO14798 259 aa9.11□□□□□ -0.95
VPS26B-205ENST00000530402 RGS13O14921 159 aa9.11□□□□□ -0.95
VPS26B-205ENST00000530402 RBL2Q08999 1139 aa9.11□□□□□ -0.95
VPS26B-205ENST00000530402 LARP1BQ659C4 914 aaKnown RBP9.11□□□□□ -0.95
VPS26B-205ENST00000530402 GPAT2Q6NUI2 795 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms