RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 ADD1P35611 737 aaKnown RBP11.89□□□□□ -0.51
SNF8-214ENST00000515174 USP5P45974 858 aa11.89□□□□□ -0.51
SNF8-214ENST00000515174 MRE11P49959 708 aa11.89□□□□□ -0.51
SNF8-214ENST00000515174 RHBDL3P58872 404 aa11.89□□□□□ -0.51
SNF8-214ENST00000515174 STRIP1Q5VSL9 837 aa11.89□□□□□ -0.51
SNF8-214ENST00000515174 BRAPQ7Z569 592 aa11.89□□□□□ -0.51
SNF8-214ENST00000515174 DGKHQ86XP1 1220 aa11.89□□□□□ -0.51
SNF8-214ENST00000515174 FANCBQ8NB91 859 aa11.89□□□□□ -0.51
SNF8-214ENST00000515174 C8orf76Q96K31 380 aa11.89□□□□□ -0.51
SNF8-214ENST00000515174 ZNF396Q96N95 335 aaPredicted RBP11.89□□□□□ -0.51
SNF8-214ENST00000515174 PRDM10Q9NQV6 1147 aa11.89□□□□□ -0.51
SNF8-214ENST00000515174 NAP1L2Q9ULW6 460 aaPredicted RBP11.89□□□□□ -0.51
SNF8-214ENST00000515174 NPM3O75607 178 aaKnown RBP11.88□□□□□ -0.51
SNF8-214ENST00000515174 DDAH1O94760 285 aa11.88□□□□□ -0.51
SNF8-214ENST00000515174 DDNO94850 711 aaPredicted RBP11.88□□□□□ -0.51
SNF8-214ENST00000515174 FMNL1O95466 1100 aaPredicted RBP11.88□□□□□ -0.51
SNF8-214ENST00000515174 POTEIP0CG38 1075 aa11.88□□□□□ -0.51
SNF8-214ENST00000515174 POTEJP0CG39 1038 aa11.88□□□□□ -0.51
SNF8-214ENST00000515174 IARSP41252 1262 aaKnown RBP11.88□□□□□ -0.51
SNF8-214ENST00000515174 BTDP43251 543 aa11.88□□□□□ -0.51
SNF8-214ENST00000515174 GTF2IP78347 998 aa11.88□□□□□ -0.51
SNF8-214ENST00000515174 DIXDC1Q155Q3 683 aa11.88□□□□□ -0.51
SNF8-214ENST00000515174 RTN1Q16799 776 aa11.88□□□□□ -0.51
SNF8-214ENST00000515174 AOC3Q16853 763 aa11.88□□□□□ -0.51
SNF8-214ENST00000515174 RRP12Q5JTH9 1297 aaKnown RBP11.88□□□□□ -0.51
SNF8-214ENST00000515174 ZNF654Q8IZM8 581 aa11.88□□□□□ -0.51
SNF8-214ENST00000515174 ENAHQ8N8S7 591 aaPredicted RBP11.88□□□□□ -0.51
SNF8-214ENST00000515174 SH3RF3Q8TEJ3 882 aaPredicted RBP11.88□□□□□ -0.51
SNF8-214ENST00000515174 CHAMP1Q96JM3 812 aa11.88□□□□□ -0.51
SNF8-214ENST00000515174 GZF1Q9H116 711 aaPredicted RBP11.88□□□□□ -0.51
SNF8-214ENST00000515174 TAOK3Q9H2K8 898 aa11.88□□□□□ -0.51
SNF8-214ENST00000515174 SENP2Q9HC62 589 aa11.88□□□□□ -0.51
SNF8-214ENST00000515174 RBM28Q9NW13 759 aaKnown RBP11.88□□□□□ -0.51
SNF8-214ENST00000515174 MCM9Q9NXL9 1143 aa11.88□□□□□ -0.51
SNF8-214ENST00000515174 MYH1P12882 1939 aa11.88□□□□□ -0.51
SNF8-214ENST00000515174 MYH8P13535 1937 aa11.88□□□□□ -0.51
SNF8-214ENST00000515174 TNKSO95271 1327 aa11.87□□□□□ -0.51
SNF8-214ENST00000515174 IQCA1LA6NCM1 817 aa11.87□□□□□ -0.51
SNF8-214ENST00000515174 SSRP1Q08945 709 aaKnown RBP11.87□□□□□ -0.51
SNF8-214ENST00000515174 TROAPQ12815 778 aa11.87□□□□□ -0.51
SNF8-214ENST00000515174 DOK7Q18PE1 504 aa11.87□□□□□ -0.51
SNF8-214ENST00000515174 ZSCAN23Q3MJ62 389 aa11.87□□□□□ -0.51
SNF8-214ENST00000515174 EAPPQ56P03 285 aaPredicted RBP11.87□□□□□ -0.51
SNF8-214ENST00000515174 CAVIN1Q6NZI2 390 aaKnown RBP11.87□□□□□ -0.51
SNF8-214ENST00000515174 CATIPQ7Z7H3 387 aa11.87□□□□□ -0.51
SNF8-214ENST00000515174 TTC6Q86TZ1 520 aa11.87□□□□□ -0.51
SNF8-214ENST00000515174 CRACR2BQ8N4Y2 399 aaPredicted RBP11.87□□□□□ -0.51
SNF8-214ENST00000515174 LEO1Q8WVC0 666 aaPredicted RBP11.87□□□□□ -0.51
SNF8-214ENST00000515174 RNF26Q9BY78 433 aaPredicted RBP11.87□□□□□ -0.51
SNF8-214ENST00000515174 DBNDD1Q9H9R9 158 aa11.87□□□□□ -0.51
SNF8-214ENST00000515174 TOMM22Q9NS69 142 aa11.87□□□□□ -0.51
SNF8-214ENST00000515174 TMEM63CQ9P1W3 806 aa11.87□□□□□ -0.51
SNF8-214ENST00000515174 CLEC11AQ9Y240 323 aa11.87□□□□□ -0.51
SNF8-214ENST00000515174 CNTNAP1P78357 1384 aa11.87□□□□□ -0.51
SNF8-214ENST00000515174 PCNTO95613 3336 aa11.86□□□□□ -0.51
SNF8-214ENST00000515174 CYP2D7A0A087X1C5 515 aa11.86□□□□□ -0.51
SNF8-214ENST00000515174 PPIP5K2O43314 1243 aa11.86□□□□□ -0.51
SNF8-214ENST00000515174 ECE2O60344 883 aa11.86□□□□□ -0.51
SNF8-214ENST00000515174 RANBP6O60518 1105 aaKnown RBP11.86□□□□□ -0.51
SNF8-214ENST00000515174 GADD45BO75293 160 aaPredicted RBP11.86□□□□□ -0.51
SNF8-214ENST00000515174 DEXIO95424 95 aa11.86□□□□□ -0.51
SNF8-214ENST00000515174 USP17L8P0C7I0 530 aa11.86□□□□□ -0.51
SNF8-214ENST00000515174 NOVP48745 357 aa11.86□□□□□ -0.51
SNF8-214ENST00000515174 VEGFBP49765 207 aa11.86□□□□□ -0.51
SNF8-214ENST00000515174 LBX1P52954 281 aa11.86□□□□□ -0.51
SNF8-214ENST00000515174 KIAA2012Q0VF49 1180 aa11.86□□□□□ -0.51
SNF8-214ENST00000515174 IFIT1BQ5T764 474 aaKnown RBP11.86□□□□□ -0.51
SNF8-214ENST00000515174 SOGA3Q5TF21 947 aa11.86□□□□□ -0.51
SNF8-214ENST00000515174 C16orf86Q6ZW13 317 aa11.86□□□□□ -0.51
SNF8-214ENST00000515174 NBPF11Q86T75 865 aa11.86□□□□□ -0.51
SNF8-214ENST00000515174 FERMT3Q86UX7 667 aa11.86□□□□□ -0.51
SNF8-214ENST00000515174 LDHDQ86WU2 507 aa11.86□□□□□ -0.51
SNF8-214ENST00000515174 MICU3Q86XE3 530 aa11.86□□□□□ -0.51
SNF8-214ENST00000515174 TEX11Q8IYF3 940 aa11.86□□□□□ -0.51
SNF8-214ENST00000515174 TRIM22Q8IYM9 498 aa11.86□□□□□ -0.51
SNF8-214ENST00000515174 RTKN2Q8IZC4 609 aa11.86□□□□□ -0.51
SNF8-214ENST00000515174 FAM177A1Q8N128 213 aaPredicted RBP11.86□□□□□ -0.51
SNF8-214ENST00000515174 CERS5Q8N5B7 392 aa11.86□□□□□ -0.51
SNF8-214ENST00000515174 TGFBRAP1Q8WUH2 860 aa11.86□□□□□ -0.51
SNF8-214ENST00000515174 PSMD1Q99460 953 aa11.86□□□□□ -0.51
SNF8-214ENST00000515174 ALG1Q9BT22 464 aa11.86□□□□□ -0.51
SNF8-214ENST00000515174 GDPD2Q9HCC8 539 aa11.86□□□□□ -0.51
SNF8-214ENST00000515174 ZNF277Q9NRM2 450 aaPredicted RBP11.86□□□□□ -0.51
SNF8-214ENST00000515174 RTEL1Q9NZ71 1219 aa11.86□□□□□ -0.51
SNF8-214ENST00000515174 DAGLAQ9Y4D2 1042 aa11.86□□□□□ -0.51
SNF8-214ENST00000515174 MYO3BQ8WXR4 1341 aa11.86□□□□□ -0.51
SNF8-214ENST00000515174 TMEM88BA6NKF7 163 aa11.85□□□□□ -0.51
SNF8-214ENST00000515174 G3V3G9 751 aa11.85□□□□□ -0.51
SNF8-214ENST00000515174 PRPF3O43395 683 aaKnown RBP11.85□□□□□ -0.51
SNF8-214ENST00000515174 FIBPO43427 364 aa11.85□□□□□ -0.51
SNF8-214ENST00000515174 U2AF2P26368 475 aaKnown RBP eCLIP11.85□□□□□ -0.516e-7■□□□□ 11
SNF8-214ENST00000515174 FUT2Q10981 343 aa11.85□□□□□ -0.51
SNF8-214ENST00000515174 CCDC183Q5T5S1 534 aa11.85□□□□□ -0.51
SNF8-214ENST00000515174 DCAF8Q5TAQ9 597 aa11.85□□□□□ -0.51
SNF8-214ENST00000515174 LRSAM1Q6UWE0 723 aa11.85□□□□□ -0.51
SNF8-214ENST00000515174 ZNF444Q8N0Y2 327 aaPredicted RBP11.85□□□□□ -0.51
SNF8-214ENST00000515174 FBXW7Q969H0 707 aa11.85□□□□□ -0.51
SNF8-214ENST00000515174 SPATA32Q96LK8 384 aa11.85□□□□□ -0.51
SNF8-214ENST00000515174 ZDHHC15Q96MV8 337 aa11.85□□□□□ -0.51
SNF8-214ENST00000515174 POLR3EQ9NVU0 708 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms