RNA–Protein interactions for RNA: ENST00000512985.1

CDK7-209, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 261 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-209ENST00000512985 ZHX2Q9Y6X8 837 aa15.22■□□□□ 0.03
CDK7-209ENST00000512985 ZMYM6O95789 1325 aa15.21■□□□□ 0.03
CDK7-209ENST00000512985 DOCK1Q14185 1865 aa15.21■□□□□ 0.03
CDK7-209ENST00000512985 ALX1Q15699 326 aa15.21■□□□□ 0.03
CDK7-209ENST00000512985 CCDC129Q6ZRS4 1044 aa15.21■□□□□ 0.03
CDK7-209ENST00000512985 C16orf86Q6ZW13 317 aa15.21■□□□□ 0.03
CDK7-209ENST00000512985 FASTKD5Q7L8L6 764 aaKnown RBP15.21■□□□□ 0.03
CDK7-209ENST00000512985 DNAJC18Q9H819 358 aa15.21■□□□□ 0.03
CDK7-209ENST00000512985 CTNNA3Q9UI47 895 aa15.21■□□□□ 0.03
CDK7-209ENST00000512985 CCL15-CCL14A0A0B4J2E2 113 aa15.2■□□□□ 0.02
CDK7-209ENST00000512985 MPHOSPH10O00566 681 aaKnown RBP15.2■□□□□ 0.02
CDK7-209ENST00000512985 IRF6O14896 467 aa15.2■□□□□ 0.02
CDK7-209ENST00000512985 HSPA1AP0DMV8 641 aaKnown RBP15.2■□□□□ 0.02
CDK7-209ENST00000512985 HSPA1BP0DMV9 641 aaKnown RBP15.2■□□□□ 0.02
CDK7-209ENST00000512985 HSPD1P10809 573 aaKnown RBP15.2■□□□□ 0.02
CDK7-209ENST00000512985 CDK8P49336 464 aa15.2■□□□□ 0.02
CDK7-209ENST00000512985 CCL15Q16663 113 aa15.2■□□□□ 0.02
CDK7-209ENST00000512985 ZNF280CQ8ND82 737 aa15.2■□□□□ 0.02
CDK7-209ENST00000512985 ZCCHC17Q9NP64 241 aaKnown RBP15.2■□□□□ 0.02
CDK7-209ENST00000512985 ZBTB21Q9ULJ3 1066 aa15.2■□□□□ 0.02
CDK7-209ENST00000512985 KCNH4Q9UQ05 1017 aa15.2■□□□□ 0.02
CDK7-209ENST00000512985 ROBO3Q96MS0 1386 aa15.2■□□□□ 0.02
CDK7-209ENST00000512985 TESPA1A2RU30 521 aaPredicted RBP15.19■□□□□ 0.02
CDK7-209ENST00000512985 GDF11O95390 407 aa15.19■□□□□ 0.02
CDK7-209ENST00000512985 GH2P01242 217 aa15.19■□□□□ 0.02
CDK7-209ENST00000512985 CYP2D6P10635 497 aa15.19■□□□□ 0.02
CDK7-209ENST00000512985 CHMLP26374 656 aa15.19■□□□□ 0.02
CDK7-209ENST00000512985 SHMT1P34896 483 aa15.19■□□□□ 0.02
CDK7-209ENST00000512985 GJA5P36382 358 aa15.19■□□□□ 0.02
CDK7-209ENST00000512985 CTCFP49711 727 aaPredicted RBP15.19■□□□□ 0.02
CDK7-209ENST00000512985 PPARAQ07869 468 aa15.19■□□□□ 0.02
CDK7-209ENST00000512985 PPP4R3BQ5MIZ7 849 aa15.19■□□□□ 0.02
CDK7-209ENST00000512985 TMEM179Q6ZVK1 233 aa15.19■□□□□ 0.02
CDK7-209ENST00000512985 IFNL1Q8IU54 200 aa15.19■□□□□ 0.02
CDK7-209ENST00000512985 ZNF444Q8N0Y2 327 aaPredicted RBP15.19■□□□□ 0.02
CDK7-209ENST00000512985 WDR18Q9BV38 432 aa15.19■□□□□ 0.02
CDK7-209ENST00000512985 DSCC1Q9BVC3 393 aa15.19■□□□□ 0.02
CDK7-209ENST00000512985 EPB41L4AQ9HCS5 686 aaPredicted RBP15.19■□□□□ 0.02
CDK7-209ENST00000512985 AFG3L2Q9Y4W6 797 aa15.19■□□□□ 0.02
CDK7-209ENST00000512985 LAMB1P07942 1786 aa15.19■□□□□ 0.02
CDK7-209ENST00000512985 SIPA1L1O43166 1804 aa15.18■□□□□ 0.02
CDK7-209ENST00000512985 BAZ2AQ9UIF9 1905 aaKnown RBP15.18■□□□□ 0.02
CDK7-209ENST00000512985 TRIM75PA6NK02 468 aa15.18■□□□□ 0.02
CDK7-209ENST00000512985 C19orf81C9J6K1 198 aa15.18■□□□□ 0.02
CDK7-209ENST00000512985 PCP11498 1178 aaKnown RBP15.18■□□□□ 0.02
CDK7-209ENST00000512985 NT5C2P49902 561 aa15.18■□□□□ 0.02
CDK7-209ENST00000512985 USP14P54578 494 aa15.18■□□□□ 0.02
CDK7-209ENST00000512985 PABPC4Q13310 644 aaKnown RBP eCLIP15.18■□□□□ 0.02
CDK7-209ENST00000512985 RAB3GAP1Q15042 981 aa15.18■□□□□ 0.02
CDK7-209ENST00000512985 KIAA1211Q6ZU35 1233 aa15.18■□□□□ 0.02
CDK7-209ENST00000512985 ZNF589Q86UQ0 364 aaPredicted RBP15.18■□□□□ 0.02
CDK7-209ENST00000512985 CNKSR2Q8WXI2 1034 aa15.18■□□□□ 0.02
CDK7-209ENST00000512985 DYNLL2Q96FJ2 89 aa15.18■□□□□ 0.02
CDK7-209ENST00000512985 MS4A4AQ96JQ5 239 aa15.18■□□□□ 0.02
CDK7-209ENST00000512985 SH2D4AQ9H788 454 aa15.18■□□□□ 0.02
CDK7-209ENST00000512985 TMOD4Q9NZQ9 345 aa15.18■□□□□ 0.02
CDK7-209ENST00000512985 CYP2D7A0A087X1C5 515 aa15.17■□□□□ 0.02
CDK7-209ENST00000512985 USP17L10C9JJH3 530 aa15.17■□□□□ 0.02
CDK7-209ENST00000512985 FGAP02671 866 aa15.17■□□□□ 0.02
CDK7-209ENST00000512985 SLURP2P0DP57 97 aa15.17■□□□□ 0.02
CDK7-209ENST00000512985 IMMTQ16891 758 aaKnown RBP15.17■□□□□ 0.02
CDK7-209ENST00000512985 PROCA1Q8NCQ7 364 aaPredicted RBP15.17■□□□□ 0.02
CDK7-209ENST00000512985 ZIC5Q96T25 663 aa15.17■□□□□ 0.02
CDK7-209ENST00000512985 FEZ1Q99689 392 aa15.17■□□□□ 0.02
CDK7-209ENST00000512985 RNF41Q9H4P4 317 aaPredicted RBP15.17■□□□□ 0.02
CDK7-209ENST00000512985 ARHGEF10LQ9HCE6 1279 aa15.17■□□□□ 0.02
CDK7-209ENST00000512985 RNF186Q9NXI6 227 aa15.17■□□□□ 0.02
CDK7-209ENST00000512985 ANAPC4Q9UJX5 808 aa15.17■□□□□ 0.02
CDK7-209ENST00000512985 ATAD5Q96QE3 1844 aa15.16■□□□□ 0.02
CDK7-209ENST00000512985 A0A0G2JLL6 359 aaPredicted RBP15.16■□□□□ 0.02
CDK7-209ENST00000512985 ZNF213O14771 459 aa15.16■□□□□ 0.02
CDK7-209ENST00000512985 CDC45O75419 566 aa15.16■□□□□ 0.02
CDK7-209ENST00000512985 TRPA1O75762 1119 aa15.16■□□□□ 0.02
CDK7-209ENST00000512985 SPP2Q13103 211 aa15.16■□□□□ 0.02
CDK7-209ENST00000512985 VPS53Q5VIR6 699 aa15.16■□□□□ 0.02
CDK7-209ENST00000512985 PRRT2Q7Z6L0 340 aaPredicted RBP15.16■□□□□ 0.02
CDK7-209ENST00000512985 ANKRD23Q86SG2 305 aa15.16■□□□□ 0.02
CDK7-209ENST00000512985 SLC44A5Q8NCS7 719 aa15.16■□□□□ 0.02
CDK7-209ENST00000512985 KANSL2Q9H9L4 492 aa15.16■□□□□ 0.02
CDK7-209ENST00000512985 ZFYVE28Q9HCC9 887 aa15.16■□□□□ 0.02
CDK7-209ENST00000512985 PNMA3Q9UL41 463 aa15.16■□□□□ 0.02
CDK7-209ENST00000512985 SGSM2O43147 1006 aa15.15■□□□□ 0.02
CDK7-209ENST00000512985 TSPY3P0CV98 308 aa15.15■□□□□ 0.02
CDK7-209ENST00000512985 TSPY8P0CW00 308 aa15.15■□□□□ 0.02
CDK7-209ENST00000512985 BACE1P56817 501 aa15.15■□□□□ 0.02
CDK7-209ENST00000512985 RRP1BQ14684 758 aaKnown RBP15.15■□□□□ 0.02
CDK7-209ENST00000512985 USP17L2Q6R6M4 530 aa15.15■□□□□ 0.02
CDK7-209ENST00000512985 GADL1Q6ZQY3 521 aa15.15■□□□□ 0.02
CDK7-209ENST00000512985 BRI3BPQ8WY22 251 aa15.15■□□□□ 0.02
CDK7-209ENST00000512985 CFHR5Q9BXR6 569 aa15.15■□□□□ 0.02
CDK7-209ENST00000512985 SLC45A1Q9Y2W3 748 aa15.15■□□□□ 0.02
CDK7-209ENST00000512985 MYH8P13535 1937 aa15.15■□□□□ 0.02
CDK7-209ENST00000512985 ICA1Q05084 483 aa15.14■□□□□ 0.01
CDK7-209ENST00000512985 TAF1CQ15572 869 aaPredicted RBP15.14■□□□□ 0.01
CDK7-209ENST00000512985 SH3D19Q5HYK7 790 aa15.14■□□□□ 0.01
CDK7-209ENST00000512985 MFSD6Q6ZSS7 791 aa15.14■□□□□ 0.01
CDK7-209ENST00000512985 PARK7Q99497 189 aaKnown RBP15.14■□□□□ 0.01
CDK7-209ENST00000512985 TOMM22Q9NS69 142 aa15.14■□□□□ 0.01
CDK7-209ENST00000512985 AGTPBP1Q9UPW5 1226 aa15.14■□□□□ 0.01
CDK7-209ENST00000512985 U3KPZ7 1027 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms