RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 TAOK2Q9UL54 1235 aa12.97□□□□□ -0.33
CPNE4-206ENST00000505957 PA2G4Q9UQ80 394 aaKnown RBP12.97□□□□□ -0.33
CPNE4-206ENST00000505957 AKAP2Q9Y2D5 859 aa12.97□□□□□ -0.33
CPNE4-206ENST00000505957 COL2A1P02458 1487 aaPredicted RBP12.97□□□□□ -0.33
CPNE4-206ENST00000505957 CDC45O75419 566 aa12.96□□□□□ -0.33
CPNE4-206ENST00000505957 LDHCP07864 332 aa12.96□□□□□ -0.33
CPNE4-206ENST00000505957 MX1P20591 662 aa12.96□□□□□ -0.33
CPNE4-206ENST00000505957 TIMM10P62072 90 aa12.96□□□□□ -0.33
CPNE4-206ENST00000505957 GSTO1P78417 241 aa12.96□□□□□ -0.33
CPNE4-206ENST00000505957 SPP2Q13103 211 aa12.96□□□□□ -0.33
CPNE4-206ENST00000505957 CCDC84Q86UT8 332 aaPredicted RBP12.96□□□□□ -0.33
CPNE4-206ENST00000505957 OTUD7AQ8TE49 926 aaPredicted RBP12.96□□□□□ -0.33
CPNE4-206ENST00000505957 DIS3LQ8TF46 1054 aaKnown RBP12.96□□□□□ -0.33
CPNE4-206ENST00000505957 XAGE2Q96GT9 111 aa12.96□□□□□ -0.33
CPNE4-206ENST00000505957 NBPF3Q9H094 633 aa12.96□□□□□ -0.33
CPNE4-206ENST00000505957 HMX1Q9NP08 348 aaPredicted RBP12.96□□□□□ -0.33
CPNE4-206ENST00000505957 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.96□□□□□ -0.33
CPNE4-206ENST00000505957 PTPRFP10586 1907 aa12.96□□□□□ -0.34
CPNE4-206ENST00000505957 MYH2Q9UKX2 1941 aa12.96□□□□□ -0.34
CPNE4-206ENST00000505957 DOCK1Q14185 1865 aa12.95□□□□□ -0.34
CPNE4-206ENST00000505957 PHIPQ8WWQ0 1821 aa12.95□□□□□ -0.34
CPNE4-206ENST00000505957 TTC41PQ6P2S7 1318 aa12.95□□□□□ -0.34
CPNE4-206ENST00000505957 A0A1B0GUL7 405 aa12.95□□□□□ -0.34
CPNE4-206ENST00000505957 USP17L5A8MUK1 530 aa12.95□□□□□ -0.34
CPNE4-206ENST00000505957 CAP2P40123 477 aa12.95□□□□□ -0.34
CPNE4-206ENST00000505957 MNX1P50219 401 aaPredicted RBP12.95□□□□□ -0.34
CPNE4-206ENST00000505957 ZNF384Q8TF68 577 aa12.95□□□□□ -0.34
CPNE4-206ENST00000505957 DDRGK1Q96HY6 314 aa12.95□□□□□ -0.34
CPNE4-206ENST00000505957 TBC1D32Q96NH3 1257 aa12.95□□□□□ -0.34
CPNE4-206ENST00000505957 ASCC2Q9H1I8 757 aaPredicted RBP12.95□□□□□ -0.34
CPNE4-206ENST00000505957 AS3MTQ9HBK9 375 aa12.95□□□□□ -0.34
CPNE4-206ENST00000505957 MORF4L1Q9UBU8 362 aa12.95□□□□□ -0.34
CPNE4-206ENST00000505957 OGDHLQ9ULD0 1010 aa12.95□□□□□ -0.34
CPNE4-206ENST00000505957 HMGCS2P54868 508 aa12.94□□□□□ -0.34
CPNE4-206ENST00000505957 G3BP1Q13283 466 aaKnown RBP eCLIP12.94□□□□□ -0.34
CPNE4-206ENST00000505957 LRIT3Q3SXY7 679 aa12.94□□□□□ -0.34
CPNE4-206ENST00000505957 C7orf61Q8IZ16 206 aa12.94□□□□□ -0.34
CPNE4-206ENST00000505957 CLASRPQ8N2M8 674 aaKnown RBP12.94□□□□□ -0.34
CPNE4-206ENST00000505957 NSUN4Q96CB9 384 aaKnown RBP12.94□□□□□ -0.34
CPNE4-206ENST00000505957 IPO9Q96P70 1041 aaKnown RBP12.94□□□□□ -0.34
CPNE4-206ENST00000505957 WDR18Q9BV38 432 aa12.94□□□□□ -0.34
CPNE4-206ENST00000505957 HERC5Q9UII4 1024 aaKnown RBP12.94□□□□□ -0.34
CPNE4-206ENST00000505957 FAM196BA6NMK8 535 aa12.93□□□□□ -0.34
CPNE4-206ENST00000505957 APBB1O00213 710 aa12.93□□□□□ -0.34
CPNE4-206ENST00000505957 SEC24BO95487 1268 aa12.93□□□□□ -0.34
CPNE4-206ENST00000505957 XRCC5P13010 732 aaKnown RBP12.93□□□□□ -0.34
CPNE4-206ENST00000505957 HOXA7P31268 230 aaPredicted RBP12.93□□□□□ -0.34
CPNE4-206ENST00000505957 TFCP2Q12800 502 aa12.93□□□□□ -0.34
CPNE4-206ENST00000505957 MAP3K21Q5TCX8 1036 aa12.93□□□□□ -0.34
CPNE4-206ENST00000505957 TBC1D9Q6ZT07 1266 aa12.93□□□□□ -0.34
CPNE4-206ENST00000505957 C11orf49Q9H6J7 331 aa12.93□□□□□ -0.34
CPNE4-206ENST00000505957 HMG20BQ9P0W2 317 aa12.93□□□□□ -0.34
CPNE4-206ENST00000505957 DOCK3Q8IZD9 2030 aa12.93□□□□□ -0.34
CPNE4-206ENST00000505957 SDSP20132 328 aa12.92□□□□□ -0.34
CPNE4-206ENST00000505957 BACE1P56817 501 aa12.92□□□□□ -0.34
CPNE4-206ENST00000505957 TRIM32Q13049 653 aa12.92□□□□□ -0.34
CPNE4-206ENST00000505957 OS9Q13438 667 aaPredicted RBP12.92□□□□□ -0.34
CPNE4-206ENST00000505957 RRP1BQ14684 758 aaKnown RBP12.92□□□□□ -0.34
CPNE4-206ENST00000505957 TRMT44Q8IYL2 757 aaKnown RBP12.92□□□□□ -0.34
CPNE4-206ENST00000505957 SPATA5Q8NB90 893 aa12.92□□□□□ -0.34
CPNE4-206ENST00000505957 SOCS4Q8WXH5 440 aa12.92□□□□□ -0.34
CPNE4-206ENST00000505957 TRIB2Q92519 343 aa12.92□□□□□ -0.34
CPNE4-206ENST00000505957 DHX36Q9H2U1 1008 aaKnown RBP12.92□□□□□ -0.34
CPNE4-206ENST00000505957 GINM1Q9NU53 330 aa12.92□□□□□ -0.34
CPNE4-206ENST00000505957 PI4KBQ9UBF8 816 aa12.92□□□□□ -0.34
CPNE4-206ENST00000505957 ZMYND8Q9ULU4 1186 aaPredicted RBP12.92□□□□□ -0.34
CPNE4-206ENST00000505957 LAMA3Q16787 3333 aa12.92□□□□□ -0.34
CPNE4-206ENST00000505957 C19orf81C9J6K1 198 aa12.91□□□□□ -0.34
CPNE4-206ENST00000505957 ARID4AP29374 1257 aaPredicted RBP12.91□□□□□ -0.34
CPNE4-206ENST00000505957 MAGEA10P43363 369 aaPredicted RBP12.91□□□□□ -0.34
CPNE4-206ENST00000505957 IRX3P78415 501 aaPredicted RBP12.91□□□□□ -0.34
CPNE4-206ENST00000505957 CASC1Q6TDU7 716 aa12.91□□□□□ -0.34
CPNE4-206ENST00000505957 TDHQ8IZJ6 230 aa12.91□□□□□ -0.34
CPNE4-206ENST00000505957 DEFB123Q8N688 67 aa12.91□□□□□ -0.34
CPNE4-206ENST00000505957 GPRC5AQ8NFJ5 357 aa12.91□□□□□ -0.34
CPNE4-206ENST00000505957 PI4K2BQ8TCG2 481 aa12.91□□□□□ -0.34
CPNE4-206ENST00000505957 GPATCH3Q96I76 525 aa12.91□□□□□ -0.34
CPNE4-206ENST00000505957 NUDT12Q9BQG2 462 aa12.91□□□□□ -0.34
CPNE4-206ENST00000505957 IL1RAPL2Q9NP60 686 aa12.91□□□□□ -0.34
CPNE4-206ENST00000505957 GPR108Q9NPR9 543 aa12.91□□□□□ -0.34
CPNE4-206ENST00000505957 TMOD4Q9NZQ9 345 aa12.91□□□□□ -0.34
CPNE4-206ENST00000505957 LOC285556D6RIA3 1793 aa12.91□□□□□ -0.34
CPNE4-206ENST00000505957 ERC2O15083 957 aa12.9□□□□□ -0.34
CPNE4-206ENST00000505957 EPB41L2O43491 1005 aaKnown RBP12.9□□□□□ -0.34
CPNE4-206ENST00000505957 GLRX3O76003 335 aaKnown RBP12.9□□□□□ -0.34
CPNE4-206ENST00000505957 ASNSP08243 561 aa12.9□□□□□ -0.34
CPNE4-206ENST00000505957 COL6A1P12109 1028 aa12.9□□□□□ -0.34
CPNE4-206ENST00000505957 PRKAR2AP13861 404 aaKnown RBP12.9□□□□□ -0.34
CPNE4-206ENST00000505957 CYP2B6P20813 491 aa12.9□□□□□ -0.34
CPNE4-206ENST00000505957 MAPK4P31152 587 aa12.9□□□□□ -0.34
CPNE4-206ENST00000505957 RBM25P49756 843 aaKnown RBP12.9□□□□□ -0.34
CPNE4-206ENST00000505957 METTL16Q86W50 562 aaKnown RBP12.9□□□□□ -0.34
CPNE4-206ENST00000505957 TEX11Q8IYF3 940 aa12.9□□□□□ -0.34
CPNE4-206ENST00000505957 GTF3C2Q8WUA4 911 aaPredicted RBP12.9□□□□□ -0.34
CPNE4-206ENST00000505957 USP6NLQ92738 828 aa12.9□□□□□ -0.34
CPNE4-206ENST00000505957 NEUROD6Q96NK8 337 aa12.9□□□□□ -0.34
CPNE4-206ENST00000505957 P2RX7Q99572 595 aaKnown RBP12.9□□□□□ -0.34
CPNE4-206ENST00000505957 RAI14Q9P0K7 980 aa12.9□□□□□ -0.34
CPNE4-206ENST00000505957 STXBP5LQ9Y2K9 1186 aa12.9□□□□□ -0.34
CPNE4-206ENST00000505957 ALPK3Q96L96 1907 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms