RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 FTSJ3Q8IY81 847 aaKnown RBP19.69■□□□□ 0.74
PDLIM7-213ENST00000505074 TMEM57Q8N5G2 664 aa19.69■□□□□ 0.74
PDLIM7-213ENST00000505074 GPRC5AQ8NFJ5 357 aa19.69■□□□□ 0.74
PDLIM7-213ENST00000505074 PDS5AQ29RF7 1337 aaKnown RBP19.69■□□□□ 0.74
PDLIM7-213ENST00000505074 PNMA6EA0A0J9YXQ4 647 aa19.68■□□□□ 0.74
PDLIM7-213ENST00000505074 MAPK4P31152 587 aa19.68■□□□□ 0.74
PDLIM7-213ENST00000505074 CAP2P40123 477 aa19.68■□□□□ 0.74
PDLIM7-213ENST00000505074 CCAR1Q8IX12 1150 aaKnown RBP19.68■□□□□ 0.74
PDLIM7-213ENST00000505074 SYMPKQ92797 1274 aaKnown RBP19.68■□□□□ 0.74
PDLIM7-213ENST00000505074 PRKAG2Q9UGJ0 569 aa19.68■□□□□ 0.74
PDLIM7-213ENST00000505074 MROH7-TTC4A0A0A0MT08 1334 aa19.68■□□□□ 0.74
PDLIM7-213ENST00000505074 LTBP2Q14767 1821 aa19.67■□□□□ 0.74
PDLIM7-213ENST00000505074 ZBTB22O15209 634 aa19.67■□□□□ 0.74
PDLIM7-213ENST00000505074 NPM3O75607 178 aaKnown RBP19.67■□□□□ 0.74
PDLIM7-213ENST00000505074 RGS2P41220 211 aa19.67■□□□□ 0.74
PDLIM7-213ENST00000505074 MIER1Q8N108 512 aa19.67■□□□□ 0.74
PDLIM7-213ENST00000505074 SENP6Q9GZR1 1112 aaPredicted RBP19.67■□□□□ 0.74
PDLIM7-213ENST00000505074 TMOD4Q9NZQ9 345 aa19.67■□□□□ 0.74
PDLIM7-213ENST00000505074 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.67■□□□□ 0.74
PDLIM7-213ENST00000505074 HOXA7P31268 230 aaPredicted RBP19.66■□□□□ 0.74
PDLIM7-213ENST00000505074 MECOMQ03112 1051 aa19.66■□□□□ 0.74
PDLIM7-213ENST00000505074 PI16Q6UXB8 463 aa19.66■□□□□ 0.74
PDLIM7-213ENST00000505074 SPATA5Q8NB90 893 aa19.66■□□□□ 0.74
PDLIM7-213ENST00000505074 P2RX7Q99572 595 aaKnown RBP19.66■□□□□ 0.74
PDLIM7-213ENST00000505074 SEMA6BQ9H3T3 888 aa19.66■□□□□ 0.74
PDLIM7-213ENST00000505074 RAI14Q9P0K7 980 aa19.66■□□□□ 0.74
PDLIM7-213ENST00000505074 HMG20BQ9P0W2 317 aa19.66■□□□□ 0.74
PDLIM7-213ENST00000505074 GPR75-ASB3A0A0A6YYF3 556 aa19.65■□□□□ 0.74
PDLIM7-213ENST00000505074 RHBDL3P58872 404 aa19.65■□□□□ 0.74
PDLIM7-213ENST00000505074 HERVK_113P62684 666 aa19.65■□□□□ 0.74
PDLIM7-213ENST00000505074 GSTO1P78417 241 aa19.65■□□□□ 0.74
PDLIM7-213ENST00000505074 CCL14Q16627 93 aa19.65■□□□□ 0.74
PDLIM7-213ENST00000505074 ITPRIPQ8IWB1 547 aa19.65■□□□□ 0.74
PDLIM7-213ENST00000505074 USP6NLQ92738 828 aa19.65■□□□□ 0.74
PDLIM7-213ENST00000505074 APBA2Q99767 749 aa19.65■□□□□ 0.74
PDLIM7-213ENST00000505074 C1orf115Q9H7X2 142 aa19.65■□□□□ 0.74
PDLIM7-213ENST00000505074 TXNRD2Q9NNW7 524 aa19.65■□□□□ 0.74
PDLIM7-213ENST00000505074 PEX10O60683 326 aa19.64■□□□□ 0.73
PDLIM7-213ENST00000505074 MAP4K4O95819 1239 aaPredicted RBP19.64■□□□□ 0.73
PDLIM7-213ENST00000505074 MTMR2Q13614 643 aa19.64■□□□□ 0.73
PDLIM7-213ENST00000505074 DIEXFQ68CQ4 756 aaKnown RBP19.64■□□□□ 0.73
PDLIM7-213ENST00000505074 TBC1D9Q6ZT07 1266 aa19.64■□□□□ 0.73
PDLIM7-213ENST00000505074 WDR18Q9BV38 432 aa19.64■□□□□ 0.73
PDLIM7-213ENST00000505074 LDHCP07864 332 aa19.63■□□□□ 0.73
PDLIM7-213ENST00000505074 UQCRFS1P1P0C7P4 283 aa19.63■□□□□ 0.73
PDLIM7-213ENST00000505074 BACE1P56817 501 aa19.63■□□□□ 0.73
PDLIM7-213ENST00000505074 TTC39AQ5SRH9 613 aa19.63■□□□□ 0.73
PDLIM7-213ENST00000505074 MORN1Q5T089 497 aa19.63■□□□□ 0.73
PDLIM7-213ENST00000505074 GPR142Q7Z601 462 aa19.63■□□□□ 0.73
PDLIM7-213ENST00000505074 PLEKHH3Q7Z736 793 aa19.63■□□□□ 0.73
PDLIM7-213ENST00000505074 GTF3C2Q8WUA4 911 aaPredicted RBP19.63■□□□□ 0.73
PDLIM7-213ENST00000505074 MYLIPQ8WY64 445 aa19.63■□□□□ 0.73
PDLIM7-213ENST00000505074 NOL10Q9BSC4 688 aaKnown RBP19.63■□□□□ 0.73
PDLIM7-213ENST00000505074 CWC22Q9HCG8 908 aaKnown RBP19.63■□□□□ 0.73
PDLIM7-213ENST00000505074 LRP2BPQ9P2M1 347 aa19.63■□□□□ 0.73
PDLIM7-213ENST00000505074 RBPJLQ9UBG7 517 aa19.63■□□□□ 0.73
PDLIM7-213ENST00000505074 HERC5Q9UII4 1024 aaKnown RBP19.63■□□□□ 0.73
PDLIM7-213ENST00000505074 VCANP13611 3396 aa19.63■□□□□ 0.73
PDLIM7-213ENST00000505074 C19orf81C9J6K1 198 aa19.62■□□□□ 0.73
PDLIM7-213ENST00000505074 ARID4AP29374 1257 aaPredicted RBP19.62■□□□□ 0.73
PDLIM7-213ENST00000505074 ATN1P54259 1190 aaPredicted RBP19.62■□□□□ 0.73
PDLIM7-213ENST00000505074 ERVK-9P63128 1117 aa19.62■□□□□ 0.73
PDLIM7-213ENST00000505074 ERVK-24P63145 666 aa19.62■□□□□ 0.73
PDLIM7-213ENST00000505074 RRP1BQ14684 758 aaKnown RBP19.62■□□□□ 0.73
PDLIM7-213ENST00000505074 SHHQ15465 462 aa19.62■□□□□ 0.73
PDLIM7-213ENST00000505074 Q3C1V9 767 aa19.62■□□□□ 0.73
PDLIM7-213ENST00000505074 LAMA2P24043 3122 aaKnown RBP19.62■□□□□ 0.73
PDLIM7-213ENST00000505074 MSCO60682 206 aa19.61■□□□□ 0.73
PDLIM7-213ENST00000505074 SURF6O75683 361 aaKnown RBP19.61■□□□□ 0.73
PDLIM7-213ENST00000505074 ASNSP08243 561 aa19.61■□□□□ 0.73
PDLIM7-213ENST00000505074 FOSL2P15408 326 aa19.61■□□□□ 0.73
PDLIM7-213ENST00000505074 MCAMP43121 646 aa19.61■□□□□ 0.73
PDLIM7-213ENST00000505074 MFSD14CQ5VZR4 134 aa19.61■□□□□ 0.73
PDLIM7-213ENST00000505074 PAGR1Q9BTK6 254 aa19.61■□□□□ 0.73
PDLIM7-213ENST00000505074 PORCNQ9H237 461 aa19.61■□□□□ 0.73
PDLIM7-213ENST00000505074 SNRKQ9NRH2 765 aa19.61■□□□□ 0.73
PDLIM7-213ENST00000505074 RLFQ13129 1914 aa19.61■□□□□ 0.73
PDLIM7-213ENST00000505074 EYSQ5T1H1 3165 aa19.6■□□□□ 0.73
PDLIM7-213ENST00000505074 GLRX3O76003 335 aaKnown RBP19.6■□□□□ 0.73
PDLIM7-213ENST00000505074 COL9A1P20849 921 aa19.6■□□□□ 0.73
PDLIM7-213ENST00000505074 RTP1P59025 263 aa19.6■□□□□ 0.73
PDLIM7-213ENST00000505074 SMAD3P84022 425 aaKnown RBP19.6■□□□□ 0.73
PDLIM7-213ENST00000505074 MAP2K5Q13163 448 aa19.6■□□□□ 0.73
PDLIM7-213ENST00000505074 TNNI3KQ59H18 835 aa19.6■□□□□ 0.73
PDLIM7-213ENST00000505074 CCDC158Q5M9N0 1113 aa19.6■□□□□ 0.73
PDLIM7-213ENST00000505074 LPAR1Q92633 364 aa19.6■□□□□ 0.73
PDLIM7-213ENST00000505074 NSUN4Q96CB9 384 aaKnown RBP19.6■□□□□ 0.73
PDLIM7-213ENST00000505074 EDC3Q96F86 508 aaKnown RBP19.6■□□□□ 0.73
PDLIM7-213ENST00000505074 DDX20Q9UHI6 824 aaKnown RBP19.6■□□□□ 0.73
PDLIM7-213ENST00000505074 FPGT-TNNI3KV9GXZ4 949 aa19.6■□□□□ 0.73
PDLIM7-213ENST00000505074 DNAH12Q6ZR08 3092 aa19.59■□□□□ 0.73
PDLIM7-213ENST00000505074 USP17L10C9JJH3 530 aa19.59■□□□□ 0.73
PDLIM7-213ENST00000505074 DNM1LO00429 736 aa19.59■□□□□ 0.73
PDLIM7-213ENST00000505074 CNGA1P29973 690 aa19.59■□□□□ 0.73
PDLIM7-213ENST00000505074 ATP8B2P98198 1209 aa19.59■□□□□ 0.73
PDLIM7-213ENST00000505074 POLA2Q14181 598 aa19.59■□□□□ 0.73
PDLIM7-213ENST00000505074 TEX11Q8IYF3 940 aa19.59■□□□□ 0.73
PDLIM7-213ENST00000505074 ZNF384Q8TF68 577 aa19.59■□□□□ 0.73
PDLIM7-213ENST00000505074 PI4KBQ9UBF8 816 aa19.59■□□□□ 0.73
PDLIM7-213ENST00000505074 ATP11BQ9Y2G3 1177 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms