RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 IL25Q9H293 177 aa14.21□□□□□ -0.13
PDLIM5-208ENST00000504489 DNAJC18Q9H819 358 aa14.21□□□□□ -0.13
PDLIM5-208ENST00000504489 CSADQ9Y600 493 aa14.21□□□□□ -0.13
PDLIM5-208ENST00000504489 THSD7BQ9C0I4 1608 aa14.21□□□□□ -0.13
PDLIM5-208ENST00000504489 CYP2D7A0A087X1C5 515 aa14.2□□□□□ -0.14
PDLIM5-208ENST00000504489 CTNND1O60716 968 aaKnown RBP14.2□□□□□ -0.14
PDLIM5-208ENST00000504489 FGAP02671 866 aa14.2□□□□□ -0.14
PDLIM5-208ENST00000504489 INPP5BP32019 993 aa14.2□□□□□ -0.14
PDLIM5-208ENST00000504489 ZNF157P51786 506 aaPredicted RBP14.2□□□□□ -0.14
PDLIM5-208ENST00000504489 VGLL4Q14135 290 aa14.2□□□□□ -0.14
PDLIM5-208ENST00000504489 NOL9Q5SY16 702 aaKnown RBP14.2□□□□□ -0.14
PDLIM5-208ENST00000504489 LHX8Q68G74 356 aa14.2□□□□□ -0.14
PDLIM5-208ENST00000504489 TATDN1Q6P1N9 297 aa14.2□□□□□ -0.14
PDLIM5-208ENST00000504489 CASC1Q6TDU7 716 aa14.2□□□□□ -0.14
PDLIM5-208ENST00000504489 ZKSCAN4Q969J2 545 aaPredicted RBP14.2□□□□□ -0.14
PDLIM5-208ENST00000504489 CCDC102AQ96A19 550 aa14.2□□□□□ -0.14
PDLIM5-208ENST00000504489 SLC10A4Q96EP9 437 aa14.2□□□□□ -0.14
PDLIM5-208ENST00000504489 CLMNQ96JQ2 1002 aa14.2□□□□□ -0.14
PDLIM5-208ENST00000504489 ESYT1Q9BSJ8 1104 aa14.2□□□□□ -0.14
PDLIM5-208ENST00000504489 SWAP70Q9UH65 585 aa14.2□□□□□ -0.14
PDLIM5-208ENST00000504489 ROBO3Q96MS0 1386 aa14.2□□□□□ -0.14
PDLIM5-208ENST00000504489 MINDY4BA8MYZ0 360 aa14.19□□□□□ -0.14
PDLIM5-208ENST00000504489 SHMT1P34896 483 aa14.19□□□□□ -0.14
PDLIM5-208ENST00000504489 CAP2P40123 477 aa14.19□□□□□ -0.14
PDLIM5-208ENST00000504489 ECE1P42892 770 aa14.19□□□□□ -0.14
PDLIM5-208ENST00000504489 C16orf86Q6ZW13 317 aa14.19□□□□□ -0.14
PDLIM5-208ENST00000504489 DNAJC5GQ8N7S2 189 aa14.19□□□□□ -0.14
PDLIM5-208ENST00000504489 GINM1Q9NU53 330 aa14.19□□□□□ -0.14
PDLIM5-208ENST00000504489 ANAPC4Q9UJX5 808 aa14.19□□□□□ -0.14
PDLIM5-208ENST00000504489 SNCAIPQ9Y6H5 919 aa14.19□□□□□ -0.14
PDLIM5-208ENST00000504489 FAM155AB1AL88 458 aaPredicted RBP14.18□□□□□ -0.14
PDLIM5-208ENST00000504489 SMIM22K7EJ46 135 aa14.18□□□□□ -0.14
PDLIM5-208ENST00000504489 SLC10A3P09131 477 aa14.18□□□□□ -0.14
PDLIM5-208ENST00000504489 CDK8P49336 464 aa14.18□□□□□ -0.14
PDLIM5-208ENST00000504489 PPARAQ07869 468 aa14.18□□□□□ -0.14
PDLIM5-208ENST00000504489 RRP1BQ14684 758 aaKnown RBP14.18□□□□□ -0.14
PDLIM5-208ENST00000504489 CYP4F22Q6NT55 531 aa14.18□□□□□ -0.14
PDLIM5-208ENST00000504489 ERO1BQ86YB8 467 aa14.18□□□□□ -0.14
PDLIM5-208ENST00000504489 RASAL3Q86YV0 1011 aa14.18□□□□□ -0.14
PDLIM5-208ENST00000504489 SCYL3Q8IZE3 742 aa14.18□□□□□ -0.14
PDLIM5-208ENST00000504489 DYNLL2Q96FJ2 89 aa14.18□□□□□ -0.14
PDLIM5-208ENST00000504489 CAPNS2Q96L46 248 aa14.18□□□□□ -0.14
PDLIM5-208ENST00000504489 SPDYE5A6NIY4 337 aa14.17□□□□□ -0.14
PDLIM5-208ENST00000504489 SLC3A2P08195 630 aaKnown RBP14.17□□□□□ -0.14
PDLIM5-208ENST00000504489 CERKLQ49MI3 558 aaPredicted RBP14.17□□□□□ -0.14
PDLIM5-208ENST00000504489 PAXIP1Q6ZW49 1069 aaPredicted RBP14.17□□□□□ -0.14
PDLIM5-208ENST00000504489 SLC44A5Q8NCS7 719 aa14.17□□□□□ -0.14
PDLIM5-208ENST00000504489 WNK4Q96J92 1243 aa14.17□□□□□ -0.14
PDLIM5-208ENST00000504489 ELP3Q9H9T3 547 aa14.17□□□□□ -0.14
PDLIM5-208ENST00000504489 CTNNA3Q9UI47 895 aa14.17□□□□□ -0.14
PDLIM5-208ENST00000504489 LOC285556D6RIA3 1793 aa14.17□□□□□ -0.14
PDLIM5-208ENST00000504489 WDR33Q9C0J8 1336 aaKnown RBP14.16□□□□□ -0.14
PDLIM5-208ENST00000504489 CEP350Q5VT06 3117 aa14.16□□□□□ -0.14
PDLIM5-208ENST00000504489 ASNSP08243 561 aa14.16□□□□□ -0.14
PDLIM5-208ENST00000504489 ZBTB48P10074 688 aaPredicted RBP14.16□□□□□ -0.14
PDLIM5-208ENST00000504489 VEGFBP49765 207 aa14.16□□□□□ -0.14
PDLIM5-208ENST00000504489 PTH1RQ03431 593 aa14.16□□□□□ -0.14
PDLIM5-208ENST00000504489 PPATQ06203 517 aa14.16□□□□□ -0.14
PDLIM5-208ENST00000504489 NOGQ13253 232 aa14.16□□□□□ -0.14
PDLIM5-208ENST00000504489 SPRYD7Q5W111 196 aa14.16□□□□□ -0.14
PDLIM5-208ENST00000504489 KIAA1211Q6ZU35 1233 aa14.16□□□□□ -0.14
PDLIM5-208ENST00000504489 OPTNQ96CV9 577 aa14.16□□□□□ -0.14
PDLIM5-208ENST00000504489 CCDC17Q96LX7 622 aa14.16□□□□□ -0.14
PDLIM5-208ENST00000504489 ZNF287Q9HBT7 754 aa14.16□□□□□ -0.14
PDLIM5-208ENST00000504489 PICK1Q9NRD5 415 aa14.16□□□□□ -0.14
PDLIM5-208ENST00000504489 FGRP09769 529 aa14.15□□□□□ -0.14
PDLIM5-208ENST00000504489 PTPRAP18433 802 aa14.15□□□□□ -0.14
PDLIM5-208ENST00000504489 GJA5P36382 358 aa14.15□□□□□ -0.14
PDLIM5-208ENST00000504489 MAP2K2P36507 400 aa14.15□□□□□ -0.14
PDLIM5-208ENST00000504489 JAG1P78504 1218 aa14.15□□□□□ -0.14
PDLIM5-208ENST00000504489 PDE4BQ07343 736 aa14.15□□□□□ -0.14
PDLIM5-208ENST00000504489 PPIL2Q13356 520 aa14.15□□□□□ -0.14
PDLIM5-208ENST00000504489 ABCB5Q2M3G0 1257 aa14.15□□□□□ -0.14
PDLIM5-208ENST00000504489 ASTLQ6HA08 431 aaPredicted RBP14.15□□□□□ -0.14
PDLIM5-208ENST00000504489 MAP4K1Q92918 833 aa14.15□□□□□ -0.14
PDLIM5-208ENST00000504489 TBC1D2Q9BYX2 928 aa14.15□□□□□ -0.14
PDLIM5-208ENST00000504489 LSG1Q9H089 658 aaKnown RBP14.15□□□□□ -0.14
PDLIM5-208ENST00000504489 ZBTB21Q9ULJ3 1066 aa14.15□□□□□ -0.14
PDLIM5-208ENST00000504489 PCDHB13Q9Y5F0 798 aa14.15□□□□□ -0.14
PDLIM5-208ENST00000504489 ZNF213O14771 459 aa14.14□□□□□ -0.15
PDLIM5-208ENST00000504489 ATMINO43313 823 aaPredicted RBP14.14□□□□□ -0.15
PDLIM5-208ENST00000504489 GDF11O95390 407 aa14.14□□□□□ -0.15
PDLIM5-208ENST00000504489 PCP11498 1178 aaKnown RBP14.14□□□□□ -0.15
PDLIM5-208ENST00000504489 CTDSPL2Q05D32 466 aa14.14□□□□□ -0.15
PDLIM5-208ENST00000504489 OTUD5Q96G74 571 aa14.14□□□□□ -0.15
PDLIM5-208ENST00000504489 MKNK2Q9HBH9 465 aa14.14□□□□□ -0.15
PDLIM5-208ENST00000504489 CABP5Q9NP86 173 aa14.14□□□□□ -0.15
PDLIM5-208ENST00000504489 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.14□□□□□ -0.15
PDLIM5-208ENST00000504489 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.14□□□□□ -0.15
PDLIM5-208ENST00000504489 USP17L5A8MUK1 530 aa14.13□□□□□ -0.15
PDLIM5-208ENST00000504489 AOC2O75106 756 aa14.13□□□□□ -0.15
PDLIM5-208ENST00000504489 GH2P01242 217 aa14.13□□□□□ -0.15
PDLIM5-208ENST00000504489 RASA1P20936 1047 aa14.13□□□□□ -0.15
PDLIM5-208ENST00000504489 HAND2P61296 217 aa14.13□□□□□ -0.15
PDLIM5-208ENST00000504489 GRM1Q13255 1194 aa14.13□□□□□ -0.15
PDLIM5-208ENST00000504489 IMMTQ16891 758 aaKnown RBP14.13□□□□□ -0.15
PDLIM5-208ENST00000504489 SHROOM1Q2M3G4 852 aaPredicted RBP14.13□□□□□ -0.15
PDLIM5-208ENST00000504489 TMEM179Q6ZVK1 233 aa14.13□□□□□ -0.15
PDLIM5-208ENST00000504489 ZNF444Q8N0Y2 327 aaPredicted RBP14.13□□□□□ -0.15
PDLIM5-208ENST00000504489 STK11IPQ8N1F8 1099 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms