RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 TFCP2Q12800 502 aa11.29□□□□□ -0.6
CCDC171-209ENST00000498725 Q3C1V9 767 aa11.29□□□□□ -0.6
CCDC171-209ENST00000498725 GORABQ5T7V8 394 aa11.29□□□□□ -0.6
CCDC171-209ENST00000498725 MAP3K21Q5TCX8 1036 aa11.29□□□□□ -0.6
CCDC171-209ENST00000498725 WDR78Q5VTH9 848 aa11.29□□□□□ -0.6
CCDC171-209ENST00000498725 GPRC5AQ8NFJ5 357 aa11.29□□□□□ -0.6
CCDC171-209ENST00000498725 FAM163AQ96GL9 167 aaPredicted RBP11.29□□□□□ -0.6
CCDC171-209ENST00000498725 XAGE2Q96GT9 111 aa11.29□□□□□ -0.6
CCDC171-209ENST00000498725 PORCNQ9H237 461 aa11.29□□□□□ -0.6
CCDC171-209ENST00000498725 FOCADQ5VW36 1801 aa11.28□□□□□ -0.6
CCDC171-209ENST00000498725 A0A1B0GUL7 405 aa11.28□□□□□ -0.6
CCDC171-209ENST00000498725 GDF11O95390 407 aa11.28□□□□□ -0.6
CCDC171-209ENST00000498725 LDHCP07864 332 aa11.28□□□□□ -0.6
CCDC171-209ENST00000498725 COL6A1P12109 1028 aa11.28□□□□□ -0.6
CCDC171-209ENST00000498725 ZYXQ15942 572 aaKnown RBP11.28□□□□□ -0.6
CCDC171-209ENST00000498725 SH3D19Q5HYK7 790 aa11.28□□□□□ -0.6
CCDC171-209ENST00000498725 ZNF697Q5TEC3 545 aa11.28□□□□□ -0.6
CCDC171-209ENST00000498725 LHX8Q68G74 356 aa11.28□□□□□ -0.6
CCDC171-209ENST00000498725 GPR142Q7Z601 462 aa11.28□□□□□ -0.6
CCDC171-209ENST00000498725 SH3RF3Q8TEJ3 882 aaPredicted RBP11.28□□□□□ -0.6
CCDC171-209ENST00000498725 SOCS4Q8WXH5 440 aa11.28□□□□□ -0.6
CCDC171-209ENST00000498725 TRIM34Q9BYJ4 488 aa11.28□□□□□ -0.6
CCDC171-209ENST00000498725 TBC1D2Q9BYX2 928 aa11.28□□□□□ -0.6
CCDC171-209ENST00000498725 RBPJLQ9UBG7 517 aa11.28□□□□□ -0.6
CCDC171-209ENST00000498725 CUL9Q8IWT3 2517 aa11.28□□□□□ -0.6
CCDC171-209ENST00000498725 MYH1P12882 1939 aa11.27□□□□□ -0.6
CCDC171-209ENST00000498725 POTEB2H3BUK9 544 aa11.27□□□□□ -0.61
CCDC171-209ENST00000498725 MAPK4P31152 587 aa11.27□□□□□ -0.61
CCDC171-209ENST00000498725 RGS2P41220 211 aa11.27□□□□□ -0.61
CCDC171-209ENST00000498725 BACE1P56817 501 aa11.27□□□□□ -0.61
CCDC171-209ENST00000498725 ERVK-9P63128 1117 aa11.27□□□□□ -0.61
CCDC171-209ENST00000498725 ERVK-24P63145 666 aa11.27□□□□□ -0.61
CCDC171-209ENST00000498725 GSTO1P78417 241 aa11.27□□□□□ -0.61
CCDC171-209ENST00000498725 PLEKHH3Q7Z736 793 aa11.27□□□□□ -0.61
CCDC171-209ENST00000498725 CRACR2BQ8N4Y2 399 aaPredicted RBP11.27□□□□□ -0.61
CCDC171-209ENST00000498725 NSUN4Q96CB9 384 aaKnown RBP11.27□□□□□ -0.61
CCDC171-209ENST00000498725 NOL10Q9BSC4 688 aaKnown RBP11.27□□□□□ -0.61
CCDC171-209ENST00000498725 SMC4Q9NTJ3 1288 aa11.27□□□□□ -0.61
CCDC171-209ENST00000498725 HMG20BQ9P0W2 317 aa11.27□□□□□ -0.61
CCDC171-209ENST00000498725 FBXO3Q9UK99 471 aa11.27□□□□□ -0.61
CCDC171-209ENST00000498725 ATP11BQ9Y2G3 1177 aa11.27□□□□□ -0.61
CCDC171-209ENST00000498725 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.27□□□□□ -0.61
CCDC171-209ENST00000498725 USP17L10C9JJH3 530 aa11.26□□□□□ -0.61
CCDC171-209ENST00000498725 ANP32CO43423 234 aa11.26□□□□□ -0.61
CCDC171-209ENST00000498725 XRCC5P13010 732 aaKnown RBP11.26□□□□□ -0.61
CCDC171-209ENST00000498725 MVPQ14764 893 aaKnown RBP11.26□□□□□ -0.61
CCDC171-209ENST00000498725 MAPKAPK5Q8IW41 473 aa11.26□□□□□ -0.61
CCDC171-209ENST00000498725 TRMT44Q8IYL2 757 aaKnown RBP11.26□□□□□ -0.61
CCDC171-209ENST00000498725 SPATA5Q8NB90 893 aa11.26□□□□□ -0.61
CCDC171-209ENST00000498725 APBA2Q99767 749 aa11.26□□□□□ -0.61
CCDC171-209ENST00000498725 PRDM5Q9NQX1 630 aaPredicted RBP11.26□□□□□ -0.61
CCDC171-209ENST00000498725 AATFQ9NY61 560 aaKnown RBP eCLIP11.26□□□□□ -0.61
CCDC171-209ENST00000498725 LRP2BPQ9P2M1 347 aa11.26□□□□□ -0.61
CCDC171-209ENST00000498725 PRKAG2Q9UGJ0 569 aa11.26□□□□□ -0.61
CCDC171-209ENST00000498725 SAP30BPQ9UHR5 308 aaKnown RBP11.26□□□□□ -0.61
CCDC171-209ENST00000498725 HERC5Q9UII4 1024 aaKnown RBP11.26□□□□□ -0.61
CCDC171-209ENST00000498725 DNAH12Q6ZR08 3092 aa11.26□□□□□ -0.61
CCDC171-209ENST00000498725 COL2A1P02458 1487 aaPredicted RBP11.25□□□□□ -0.61
CCDC171-209ENST00000498725 RLFQ13129 1914 aa11.25□□□□□ -0.61
CCDC171-209ENST00000498725 ASNSP08243 561 aa11.25□□□□□ -0.61
CCDC171-209ENST00000498725 HOXA7P31268 230 aaPredicted RBP11.25□□□□□ -0.61
CCDC171-209ENST00000498725 RTP1P59025 263 aa11.25□□□□□ -0.61
CCDC171-209ENST00000498725 MORN1Q5T089 497 aa11.25□□□□□ -0.61
CCDC171-209ENST00000498725 ANO1Q5XXA6 986 aa11.25□□□□□ -0.61
CCDC171-209ENST00000498725 FAM109BQ6ICB4 259 aaPredicted RBP11.25□□□□□ -0.61
CCDC171-209ENST00000498725 MAFAQ8NHW3 353 aaPredicted RBP11.25□□□□□ -0.61
CCDC171-209ENST00000498725 TGFBRAP1Q8WUH2 860 aa11.25□□□□□ -0.61
CCDC171-209ENST00000498725 MYLIPQ8WY64 445 aa11.25□□□□□ -0.61
CCDC171-209ENST00000498725 USP6NLQ92738 828 aa11.25□□□□□ -0.61
CCDC171-209ENST00000498725 EDC3Q96F86 508 aaKnown RBP11.25□□□□□ -0.61
CCDC171-209ENST00000498725 CDX2Q99626 313 aaPredicted RBP11.25□□□□□ -0.61
CCDC171-209ENST00000498725 MEIS3Q99687 375 aa11.25□□□□□ -0.61
CCDC171-209ENST00000498725 WDR18Q9BV38 432 aa11.25□□□□□ -0.61
CCDC171-209ENST00000498725 COPRSQ9NQ92 184 aa11.25□□□□□ -0.61
CCDC171-209ENST00000498725 SNRKQ9NRH2 765 aa11.25□□□□□ -0.61
CCDC171-209ENST00000498725 FLRT1Q9NZU1 646 aa11.25□□□□□ -0.61
CCDC171-209ENST00000498725 PI4KBQ9UBF8 816 aa11.25□□□□□ -0.61
CCDC171-209ENST00000498725 PALD1Q9ULE6 856 aa11.25□□□□□ -0.61
CCDC171-209ENST00000498725 AKAP2Q9Y2D5 859 aa11.25□□□□□ -0.61
CCDC171-209ENST00000498725 PDS5AQ29RF7 1337 aaKnown RBP11.25□□□□□ -0.61
CCDC171-209ENST00000498725 C19orf81C9J6K1 198 aa11.24□□□□□ -0.61
CCDC171-209ENST00000498725 ATP2B2Q01814 1243 aa11.24□□□□□ -0.61
CCDC171-209ENST00000498725 MAP2K5Q13163 448 aa11.24□□□□□ -0.61
CCDC171-209ENST00000498725 SHHQ15465 462 aa11.24□□□□□ -0.61
CCDC171-209ENST00000498725 C9orf50Q5SZB4 431 aa11.24□□□□□ -0.61
CCDC171-209ENST00000498725 GJC2Q5T442 439 aaPredicted RBP11.24□□□□□ -0.61
CCDC171-209ENST00000498725 MFSD14CQ5VZR4 134 aa11.24□□□□□ -0.61
CCDC171-209ENST00000498725 POTEEQ6S8J3 1075 aa11.24□□□□□ -0.61
CCDC171-209ENST00000498725 DNAJC18Q9H819 358 aa11.24□□□□□ -0.61
CCDC171-209ENST00000498725 SRGAP3O43295 1099 aa11.23□□□□□ -0.61
CCDC171-209ENST00000498725 CYP2C19P33261 490 aa11.23□□□□□ -0.61
CCDC171-209ENST00000498725 MCAMP43121 646 aa11.23□□□□□ -0.61
CCDC171-209ENST00000498725 NAA16Q6N069 864 aaPredicted RBP11.23□□□□□ -0.61
CCDC171-209ENST00000498725 FEZ1Q99689 392 aa11.23□□□□□ -0.61
CCDC171-209ENST00000498725 SEMA6BQ9H3T3 888 aa11.23□□□□□ -0.61
CCDC171-209ENST00000498725 EMILIN3Q9NT22 766 aa11.23□□□□□ -0.61
CCDC171-209ENST00000498725 DDX20Q9UHI6 824 aaKnown RBP11.23□□□□□ -0.61
CCDC171-209ENST00000498725 ZBTB21Q9ULJ3 1066 aa11.23□□□□□ -0.61
CCDC171-209ENST00000498725 NOB1Q9ULX3 412 aaKnown RBP11.23□□□□□ -0.61
CCDC171-209ENST00000498725 CNMDO75829 334 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms