RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 EVX2Q03828 476 aa11.5□□□□□ -0.57
PRPF3-207ENST00000496202 PDE4BQ07343 736 aa11.5□□□□□ -0.57
PRPF3-207ENST00000496202 PPARAQ07869 468 aa11.5□□□□□ -0.57
PRPF3-207ENST00000496202 CERKLQ49MI3 558 aaPredicted RBP11.5□□□□□ -0.57
PRPF3-207ENST00000496202 CYP4F22Q6NT55 531 aa11.5□□□□□ -0.57
PRPF3-207ENST00000496202 C16orf86Q6ZW13 317 aa11.5□□□□□ -0.57
PRPF3-207ENST00000496202 ERO1BQ86YB8 467 aa11.5□□□□□ -0.57
PRPF3-207ENST00000496202 RASAL3Q86YV0 1011 aa11.5□□□□□ -0.57
PRPF3-207ENST00000496202 SCYL3Q8IZE3 742 aa11.5□□□□□ -0.57
PRPF3-207ENST00000496202 SLC44A5Q8NCS7 719 aa11.5□□□□□ -0.57
PRPF3-207ENST00000496202 OTUD5Q96G74 571 aa11.5□□□□□ -0.57
PRPF3-207ENST00000496202 MKNK2Q9HBH9 465 aa11.5□□□□□ -0.57
PRPF3-207ENST00000496202 ANO2Q9NQ90 1003 aa11.5□□□□□ -0.57
PRPF3-207ENST00000496202 SNCAIPQ9Y6H5 919 aa11.5□□□□□ -0.57
PRPF3-207ENST00000496202 ROBO3Q96MS0 1386 aa11.5□□□□□ -0.57
PRPF3-207ENST00000496202 MPHOSPH10O00566 681 aaKnown RBP11.49□□□□□ -0.57
PRPF3-207ENST00000496202 FOXP2O15409 715 aa11.49□□□□□ -0.57
PRPF3-207ENST00000496202 GDF11O95390 407 aa11.49□□□□□ -0.57
PRPF3-207ENST00000496202 ASNSP08243 561 aa11.49□□□□□ -0.57
PRPF3-207ENST00000496202 SHMT1P34896 483 aa11.49□□□□□ -0.57
PRPF3-207ENST00000496202 CAP2P40123 477 aa11.49□□□□□ -0.57
PRPF3-207ENST00000496202 CDK8P49336 464 aa11.49□□□□□ -0.57
PRPF3-207ENST00000496202 VEGFBP49765 207 aa11.49□□□□□ -0.57
PRPF3-207ENST00000496202 HAND2P61296 217 aa11.49□□□□□ -0.57
PRPF3-207ENST00000496202 GABPAQ06546 454 aa11.49□□□□□ -0.57
PRPF3-207ENST00000496202 MKRN3Q13064 507 aaKnown RBP11.49□□□□□ -0.57
PRPF3-207ENST00000496202 NOGQ13253 232 aa11.49□□□□□ -0.57
PRPF3-207ENST00000496202 IMMTQ16891 758 aaKnown RBP11.49□□□□□ -0.57
PRPF3-207ENST00000496202 ABCB5Q2M3G0 1257 aa11.49□□□□□ -0.57
PRPF3-207ENST00000496202 TATDN1Q6P1N9 297 aa11.49□□□□□ -0.57
PRPF3-207ENST00000496202 OPTNQ96CV9 577 aa11.49□□□□□ -0.57
PRPF3-207ENST00000496202 WNK4Q96J92 1243 aa11.49□□□□□ -0.57
PRPF3-207ENST00000496202 IL25Q9H293 177 aa11.49□□□□□ -0.57
PRPF3-207ENST00000496202 CABP5Q9NP86 173 aa11.49□□□□□ -0.57
PRPF3-207ENST00000496202 TOMM22Q9NS69 142 aa11.49□□□□□ -0.57
PRPF3-207ENST00000496202 GINM1Q9NU53 330 aa11.49□□□□□ -0.57
PRPF3-207ENST00000496202 SPDYE5A6NIY4 337 aa11.48□□□□□ -0.57
PRPF3-207ENST00000496202 ZNF213O14771 459 aa11.48□□□□□ -0.57
PRPF3-207ENST00000496202 GH2P01242 217 aa11.48□□□□□ -0.57
PRPF3-207ENST00000496202 ZBTB48P10074 688 aaPredicted RBP11.48□□□□□ -0.57
PRPF3-207ENST00000496202 CTDSPL2Q05D32 466 aa11.48□□□□□ -0.57
PRPF3-207ENST00000496202 PPIL2Q13356 520 aa11.48□□□□□ -0.57
PRPF3-207ENST00000496202 NBR1Q14596 966 aa11.48□□□□□ -0.57
PRPF3-207ENST00000496202 SPRYD7Q5W111 196 aa11.48□□□□□ -0.57
PRPF3-207ENST00000496202 CCDC17Q96LX7 622 aa11.48□□□□□ -0.57
PRPF3-207ENST00000496202 ZBTB21Q9ULJ3 1066 aa11.48□□□□□ -0.57
PRPF3-207ENST00000496202 WDR33Q9C0J8 1336 aaKnown RBP11.48□□□□□ -0.57
PRPF3-207ENST00000496202 USP17L5A8MUK1 530 aa11.47□□□□□ -0.57
PRPF3-207ENST00000496202 SMIM22K7EJ46 135 aa11.47□□□□□ -0.57
PRPF3-207ENST00000496202 REC8O95072 547 aa11.47□□□□□ -0.57
PRPF3-207ENST00000496202 PTPRAP18433 802 aa11.47□□□□□ -0.57
PRPF3-207ENST00000496202 PTH1RQ03431 593 aa11.47□□□□□ -0.57
PRPF3-207ENST00000496202 PPATQ06203 517 aa11.47□□□□□ -0.57
PRPF3-207ENST00000496202 RAB3GAP1Q15042 981 aa11.47□□□□□ -0.57
PRPF3-207ENST00000496202 ZNF444Q8N0Y2 327 aaPredicted RBP11.47□□□□□ -0.57
PRPF3-207ENST00000496202 TBC1D2Q9BYX2 928 aa11.47□□□□□ -0.57
PRPF3-207ENST00000496202 RNF41Q9H4P4 317 aaPredicted RBP11.47□□□□□ -0.57
PRPF3-207ENST00000496202 AS3MTQ9HBK9 375 aa11.47□□□□□ -0.57
PRPF3-207ENST00000496202 ANAPC4Q9UJX5 808 aa11.47□□□□□ -0.57
PRPF3-207ENST00000496202 MANSC4A6NHS7 340 aaPredicted RBP11.46□□□□□ -0.57
PRPF3-207ENST00000496202 FAM155AB1AL88 458 aaPredicted RBP11.46□□□□□ -0.57
PRPF3-207ENST00000496202 EIF5BO60841 1220 aaKnown RBP11.46□□□□□ -0.57
PRPF3-207ENST00000496202 AOC2O75106 756 aa11.46□□□□□ -0.57
PRPF3-207ENST00000496202 PRDM1O75626 825 aa11.46□□□□□ -0.57
PRPF3-207ENST00000496202 PCP11498 1178 aaKnown RBP11.46□□□□□ -0.57
PRPF3-207ENST00000496202 RASA1P20936 1047 aa11.46□□□□□ -0.57
PRPF3-207ENST00000496202 SREBF2Q12772 1141 aa11.46□□□□□ -0.57
PRPF3-207ENST00000496202 SNAPC2Q13487 334 aa11.46□□□□□ -0.57
PRPF3-207ENST00000496202 RRP1BQ14684 758 aaKnown RBP11.46□□□□□ -0.57
PRPF3-207ENST00000496202 RRP12Q5JTH9 1297 aaKnown RBP11.46□□□□□ -0.57
PRPF3-207ENST00000496202 MFSD6Q6ZSS7 791 aa11.46□□□□□ -0.57
PRPF3-207ENST00000496202 TMEM179Q6ZVK1 233 aa11.46□□□□□ -0.57
PRPF3-207ENST00000496202 FEZ1Q99689 392 aa11.46□□□□□ -0.57
PRPF3-207ENST00000496202 RBM8AQ9Y5S9 174 aaKnown RBP11.46□□□□□ -0.57
PRPF3-207ENST00000496202 ZHX2Q9Y6X8 837 aa11.46□□□□□ -0.57
PRPF3-207ENST00000496202 PHIPQ8WWQ0 1821 aa11.46□□□□□ -0.58
PRPF3-207ENST00000496202 PTPRFP10586 1907 aa11.45□□□□□ -0.58
PRPF3-207ENST00000496202 TRIM75PA6NK02 468 aa11.45□□□□□ -0.58
PRPF3-207ENST00000496202 TSPY2A6NKD2 308 aa11.45□□□□□ -0.58
PRPF3-207ENST00000496202 ORC4O43929 436 aa11.45□□□□□ -0.58
PRPF3-207ENST00000496202 RANBP6O60518 1105 aaKnown RBP11.45□□□□□ -0.58
PRPF3-207ENST00000496202 TSPY3P0CV98 308 aa11.45□□□□□ -0.58
PRPF3-207ENST00000496202 TSPY8P0CW00 308 aa11.45□□□□□ -0.58
PRPF3-207ENST00000496202 AKR1B1P15121 316 aa11.45□□□□□ -0.58
PRPF3-207ENST00000496202 GJA5P36382 358 aa11.45□□□□□ -0.58
PRPF3-207ENST00000496202 MAP2K2P36507 400 aa11.45□□□□□ -0.58
PRPF3-207ENST00000496202 GTF2A2P52657 109 aa11.45□□□□□ -0.58
PRPF3-207ENST00000496202 KIF23Q02241 960 aaPredicted RBP11.45□□□□□ -0.58
PRPF3-207ENST00000496202 SEPT2Q15019 361 aa11.45□□□□□ -0.58
PRPF3-207ENST00000496202 AKNAD1Q5T1N1 836 aa11.45□□□□□ -0.58
PRPF3-207ENST00000496202 RNF20Q5VTR2 975 aa11.45□□□□□ -0.58
PRPF3-207ENST00000496202 CCDC84Q86UT8 332 aaPredicted RBP11.45□□□□□ -0.58
PRPF3-207ENST00000496202 TBC1D10CQ8IV04 446 aa11.45□□□□□ -0.58
PRPF3-207ENST00000496202 REM2Q8IYK8 340 aaPredicted RBP11.45□□□□□ -0.58
PRPF3-207ENST00000496202 STAG1Q8WVM7 1258 aa11.45□□□□□ -0.58
PRPF3-207ENST00000496202 MAP4K1Q92918 833 aa11.45□□□□□ -0.58
PRPF3-207ENST00000496202 LSG1Q9H089 658 aaKnown RBP11.45□□□□□ -0.58
PRPF3-207ENST00000496202 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.45□□□□□ -0.58
PRPF3-207ENST00000496202 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.45□□□□□ -0.58
PRPF3-207ENST00000496202 THSD7BQ9C0I4 1608 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms