RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 MVPQ14764 893 aaKnown RBP16.63■□□□□ 0.25
COL1A1-209ENST00000495677 TMOD4Q9NZQ9 345 aa16.63■□□□□ 0.25
COL1A1-209ENST00000495677 PA2G4Q9UQ80 394 aaKnown RBP16.63■□□□□ 0.25
COL1A1-209ENST00000495677 MYH1P12882 1939 aa16.62■□□□□ 0.25
COL1A1-209ENST00000495677 USP17L10C9JJH3 530 aa16.62■□□□□ 0.25
COL1A1-209ENST00000495677 CCND3P30281 292 aaPredicted RBP16.62■□□□□ 0.25
COL1A1-209ENST00000495677 ERVK-9P63128 1117 aa16.62■□□□□ 0.25
COL1A1-209ENST00000495677 ERVK-24P63145 666 aa16.62■□□□□ 0.25
COL1A1-209ENST00000495677 MDM2Q00987 491 aaPredicted RBP16.62■□□□□ 0.25
COL1A1-209ENST00000495677 MTMR2Q13614 643 aa16.62■□□□□ 0.25
COL1A1-209ENST00000495677 GPR142Q7Z601 462 aa16.62■□□□□ 0.25
COL1A1-209ENST00000495677 FOXP4Q8IVH2 680 aaPredicted RBP16.62■□□□□ 0.25
COL1A1-209ENST00000495677 HMG20BQ9P0W2 317 aa16.62■□□□□ 0.25
COL1A1-209ENST00000495677 ZNFX1Q9P2E3 1918 aaKnown RBP16.61■□□□□ 0.25
COL1A1-209ENST00000495677 VCANP13611 3396 aa16.61■□□□□ 0.25
COL1A1-209ENST00000495677 E9PSI1 815 aa16.61■□□□□ 0.25
COL1A1-209ENST00000495677 APBA2Q99767 749 aa16.61■□□□□ 0.25
COL1A1-209ENST00000495677 EYSQ5T1H1 3165 aa16.61■□□□□ 0.25
COL1A1-209ENST00000495677 MSCO60682 206 aa16.6■□□□□ 0.25
COL1A1-209ENST00000495677 PLEKHH3Q7Z736 793 aa16.6■□□□□ 0.25
COL1A1-209ENST00000495677 SPATA5Q8NB90 893 aa16.6■□□□□ 0.25
COL1A1-209ENST00000495677 LBHD1Q9BQE6 289 aaPredicted RBP16.6■□□□□ 0.25
COL1A1-209ENST00000495677 PORCNQ9H237 461 aa16.6■□□□□ 0.25
COL1A1-209ENST00000495677 SMCHD1A6NHR9 2005 aa16.59■□□□□ 0.25
COL1A1-209ENST00000495677 ANP32CO43423 234 aa16.59■□□□□ 0.25
COL1A1-209ENST00000495677 IGSF3O75054 1194 aa16.59■□□□□ 0.25
COL1A1-209ENST00000495677 ARID4AP29374 1257 aaPredicted RBP16.59■□□□□ 0.25
COL1A1-209ENST00000495677 PPP4CP60510 307 aa16.59■□□□□ 0.25
COL1A1-209ENST00000495677 MAP2K5Q13163 448 aa16.59■□□□□ 0.25
COL1A1-209ENST00000495677 CCL14Q16627 93 aa16.59■□□□□ 0.25
COL1A1-209ENST00000495677 POTEEQ6S8J3 1075 aa16.59■□□□□ 0.25
COL1A1-209ENST00000495677 TEX11Q8IYF3 940 aa16.59■□□□□ 0.25
COL1A1-209ENST00000495677 EDC3Q96F86 508 aaKnown RBP16.59■□□□□ 0.25
COL1A1-209ENST00000495677 PEX10O60683 326 aa16.58■□□□□ 0.24
COL1A1-209ENST00000495677 PLCG2P16885 1265 aa16.58■□□□□ 0.24
COL1A1-209ENST00000495677 JAG1P78504 1218 aa16.58■□□□□ 0.24
COL1A1-209ENST00000495677 TFCP2Q12800 502 aa16.58■□□□□ 0.24
COL1A1-209ENST00000495677 MTX1Q13505 466 aa16.58■□□□□ 0.24
COL1A1-209ENST00000495677 ZNF697Q5TEC3 545 aa16.58■□□□□ 0.24
COL1A1-209ENST00000495677 CCAR1Q8IX12 1150 aaKnown RBP16.58■□□□□ 0.24
COL1A1-209ENST00000495677 LPAR1Q92633 364 aa16.58■□□□□ 0.24
COL1A1-209ENST00000495677 SENP6Q9GZR1 1112 aaPredicted RBP16.58■□□□□ 0.24
COL1A1-209ENST00000495677 RABGAP1Q9Y3P9 1069 aa16.58■□□□□ 0.24
COL1A1-209ENST00000495677 PRUNE2Q8WUY3 3088 aa16.58■□□□□ 0.24
COL1A1-209ENST00000495677 GLRX3O76003 335 aaKnown RBP16.57■□□□□ 0.24
COL1A1-209ENST00000495677 BAG3O95817 575 aa16.57■□□□□ 0.24
COL1A1-209ENST00000495677 IGHA2P01877 340 aa16.57■□□□□ 0.24
COL1A1-209ENST00000495677 HOXC6P09630 235 aa16.57■□□□□ 0.24
COL1A1-209ENST00000495677 SLFN5Q08AF3 891 aa16.57■□□□□ 0.24
COL1A1-209ENST00000495677 MFSD14CQ5VZR4 134 aa16.57■□□□□ 0.24
COL1A1-209ENST00000495677 USP17L2Q6R6M4 530 aa16.57■□□□□ 0.24
COL1A1-209ENST00000495677 TBC1D9Q6ZT07 1266 aa16.57■□□□□ 0.24
COL1A1-209ENST00000495677 FAM9BQ8IZU0 186 aa16.57■□□□□ 0.24
COL1A1-209ENST00000495677 C12orf42Q96LP6 360 aa16.57■□□□□ 0.24
COL1A1-209ENST00000495677 DNAJC18Q9H819 358 aa16.57■□□□□ 0.24
COL1A1-209ENST00000495677 EMILIN3Q9NT22 766 aa16.57■□□□□ 0.24
COL1A1-209ENST00000495677 RAI14Q9P0K7 980 aa16.57■□□□□ 0.24
COL1A1-209ENST00000495677 SLC15A5A6NIM6 579 aa16.56■□□□□ 0.24
COL1A1-209ENST00000495677 DNM1LO00429 736 aa16.56■□□□□ 0.24
COL1A1-209ENST00000495677 CCNA1P78396 465 aa16.56■□□□□ 0.24
COL1A1-209ENST00000495677 LBX2Q6XYB7 198 aa16.56■□□□□ 0.24
COL1A1-209ENST00000495677 SH3RF3Q8TEJ3 882 aaPredicted RBP16.56■□□□□ 0.24
COL1A1-209ENST00000495677 NEUROD6Q96NK8 337 aa16.56■□□□□ 0.24
COL1A1-209ENST00000495677 NOL10Q9BSC4 688 aaKnown RBP16.56■□□□□ 0.24
COL1A1-209ENST00000495677 DDX20Q9UHI6 824 aaKnown RBP16.56■□□□□ 0.24
COL1A1-209ENST00000495677 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.56■□□□□ 0.24
COL1A1-209ENST00000495677 UQCRFS1P1P0C7P4 283 aa16.55■□□□□ 0.24
COL1A1-209ENST00000495677 PTPREP23469 700 aa16.55■□□□□ 0.24
COL1A1-209ENST00000495677 MCAMP43121 646 aa16.55■□□□□ 0.24
COL1A1-209ENST00000495677 PI16Q6UXB8 463 aa16.55■□□□□ 0.24
COL1A1-209ENST00000495677 CDX2Q99626 313 aaPredicted RBP16.55■□□□□ 0.24
COL1A1-209ENST00000495677 API5Q9BZZ5 524 aaKnown RBP16.55■□□□□ 0.24
COL1A1-209ENST00000495677 SEMA6BQ9H3T3 888 aa16.55■□□□□ 0.24
COL1A1-209ENST00000495677 SMC4Q9NTJ3 1288 aa16.55■□□□□ 0.24
COL1A1-209ENST00000495677 LRP2BPQ9P2M1 347 aa16.55■□□□□ 0.24
COL1A1-209ENST00000495677 PRKAG2Q9UGJ0 569 aa16.55■□□□□ 0.24
COL1A1-209ENST00000495677 ZBTB21Q9ULJ3 1066 aa16.55■□□□□ 0.24
COL1A1-209ENST00000495677 ZNF236Q9UL36 1845 aa16.54■□□□□ 0.24
COL1A1-209ENST00000495677 SRGAP3O43295 1099 aa16.54■□□□□ 0.24
COL1A1-209ENST00000495677 CNMDO75829 334 aa16.54■□□□□ 0.24
COL1A1-209ENST00000495677 CT47B1P0C2W7 299 aaPredicted RBP16.54■□□□□ 0.24
COL1A1-209ENST00000495677 TGFBRAP1Q8WUH2 860 aa16.54■□□□□ 0.24
COL1A1-209ENST00000495677 FAM161BQ96MY7 647 aa16.54■□□□□ 0.24
COL1A1-209ENST00000495677 MEIS3Q99687 375 aa16.54■□□□□ 0.24
COL1A1-209ENST00000495677 PAGR1Q9BTK6 254 aa16.54■□□□□ 0.24
COL1A1-209ENST00000495677 PRDM6Q9NQX0 595 aa16.54■□□□□ 0.24
COL1A1-209ENST00000495677 FLRT1Q9NZU1 646 aa16.54■□□□□ 0.24
COL1A1-209ENST00000495677 SPTBN5Q9NRC6 3674 aaKnown RBP16.54■□□□□ 0.24
COL1A1-209ENST00000495677 FLT1P17948 1338 aa16.53■□□□□ 0.24
COL1A1-209ENST00000495677 USP17L15C9J2P7 530 aa16.53■□□□□ 0.24
COL1A1-209ENST00000495677 USP17L13C9JLJ4 530 aa16.53■□□□□ 0.24
COL1A1-209ENST00000495677 USP17L11C9JVI0 530 aa16.53■□□□□ 0.24
COL1A1-209ENST00000495677 USP17L18D6R9N7 530 aa16.53■□□□□ 0.24
COL1A1-209ENST00000495677 USP17L22D6RA61 530 aa16.53■□□□□ 0.24
COL1A1-209ENST00000495677 USP17L17D6RBQ6 530 aa16.53■□□□□ 0.24
COL1A1-209ENST00000495677 USP17L19D6RCP7 530 aa16.53■□□□□ 0.24
COL1A1-209ENST00000495677 USP17L20D6RJB6 530 aa16.53■□□□□ 0.24
COL1A1-209ENST00000495677 GNAI3P08754 354 aa16.53■□□□□ 0.24
COL1A1-209ENST00000495677 SMAD3P84022 425 aaKnown RBP16.53■□□□□ 0.24
COL1A1-209ENST00000495677 USP17L24Q0WX57 530 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms