RNA–Protein interactions for RNA: ENST00000493518.5

CACUL1-206, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-206ENST00000493518 TMEM139Q8IV31 216 aa17.75■□□□□ 0.43
CACUL1-206ENST00000493518 N4BP1O75113 896 aaKnown RBP17.75■□□□□ 0.43
CACUL1-206ENST00000493518 CYP7A1P22680 504 aa17.75■□□□□ 0.43
CACUL1-206ENST00000493518 IRX5P78411 483 aaPredicted RBP17.75■□□□□ 0.43
CACUL1-206ENST00000493518 SMIM5Q71RC9 77 aa17.75■□□□□ 0.43
CACUL1-206ENST00000493518 SYMPKQ92797 1274 aaKnown RBP17.75■□□□□ 0.43
CACUL1-206ENST00000493518 CAPZA3Q96KX2 299 aa17.75■□□□□ 0.43
CACUL1-206ENST00000493518 PCDH11XQ9BZA7 1347 aa17.75■□□□□ 0.43
CACUL1-206ENST00000493518 PCDH11YQ9BZA8 1340 aa17.75■□□□□ 0.43
CACUL1-206ENST00000493518 LMO7Q8WWI1 1683 aa17.75■□□□□ 0.43
CACUL1-206ENST00000493518 PLEKHA8P1O95397 391 aa17.74■□□□□ 0.43
CACUL1-206ENST00000493518 STARD3NLO95772 234 aa17.74■□□□□ 0.43
CACUL1-206ENST00000493518 MCM7P33993 719 aa17.74■□□□□ 0.43
CACUL1-206ENST00000493518 BICDL1Q6ZP65 573 aa17.74■□□□□ 0.43
CACUL1-206ENST00000493518 NUTM2AQ8IVF1 878 aaPredicted RBP17.74■□□□□ 0.43
CACUL1-206ENST00000493518 PDE11AQ9HCR9 933 aa17.74■□□□□ 0.43
CACUL1-206ENST00000493518 TRIM10Q9UDY6 481 aa17.74■□□□□ 0.43
CACUL1-206ENST00000493518 FBXO2Q9UK22 296 aaPredicted RBP17.74■□□□□ 0.43
CACUL1-206ENST00000493518 LAMA4Q16363 1823 aa17.74■□□□□ 0.43
CACUL1-206ENST00000493518 CPDO75976 1380 aa17.74■□□□□ 0.43
CACUL1-206ENST00000493518 KIF5CO60282 957 aa17.74■□□□□ 0.43
CACUL1-206ENST00000493518 NMT2O60551 498 aa17.74■□□□□ 0.43
CACUL1-206ENST00000493518 PCCAP05165 728 aaPredicted RBP17.74■□□□□ 0.43
CACUL1-206ENST00000493518 CHMP4BP1P59074 171 aa17.74■□□□□ 0.43
CACUL1-206ENST00000493518 RRAGBQ5VZM2 374 aa17.74■□□□□ 0.43
CACUL1-206ENST00000493518 ZNF654Q8IZM8 581 aa17.74■□□□□ 0.43
CACUL1-206ENST00000493518 TMEM87BQ96K49 555 aa17.74■□□□□ 0.43
CACUL1-206ENST00000493518 GUCA1BQ9UMX6 200 aa17.74■□□□□ 0.43
CACUL1-206ENST00000493518 CHD2O14647 1828 aaKnown RBP17.74■□□□□ 0.43
CACUL1-206ENST00000493518 AFDNP55196 1824 aaKnown RBP17.74■□□□□ 0.43
CACUL1-206ENST00000493518 TMEM94Q12767 1356 aa17.73■□□□□ 0.43
CACUL1-206ENST00000493518 N4BP2Q86UW6 1770 aaPredicted RBP17.73■□□□□ 0.43
CACUL1-206ENST00000493518 SLC35F6Q8N357 371 aa17.73■□□□□ 0.43
CACUL1-206ENST00000493518 GSG1L2A8MUP6 293 aa17.73■□□□□ 0.43
CACUL1-206ENST00000493518 PATL2C9JE40 543 aaKnown RBP17.73■□□□□ 0.43
CACUL1-206ENST00000493518 TTF1Q15361 905 aaPredicted RBP17.73■□□□□ 0.43
CACUL1-206ENST00000493518 LONRF2Q1L5Z9 754 aa17.73■□□□□ 0.43
CACUL1-206ENST00000493518 C10orf67Q8IYJ2 551 aa17.73■□□□□ 0.43
CACUL1-206ENST00000493518 FANCBQ8NB91 859 aa17.73■□□□□ 0.43
CACUL1-206ENST00000493518 RGS22Q8NE09 1264 aa17.73■□□□□ 0.43
CACUL1-206ENST00000493518 GOLGA1Q92805 767 aa17.73■□□□□ 0.43
CACUL1-206ENST00000493518 NACAP1Q9BZK3 213 aa17.73■□□□□ 0.43
CACUL1-206ENST00000493518 TRIM75PA6NK02 468 aa17.72■□□□□ 0.43
CACUL1-206ENST00000493518 FXR1P51114 621 aaKnown RBP eCLIP17.72■□□□□ 0.43
CACUL1-206ENST00000493518 FAM47AQ5JRC9 791 aa17.72■□□□□ 0.43
CACUL1-206ENST00000493518 NCAPH2Q6IBW4 605 aa17.72■□□□□ 0.43
CACUL1-206ENST00000493518 C1orf167Q5SNV9 1468 aa17.72■□□□□ 0.43
CACUL1-206ENST00000493518 SYNRGQ9UMZ2 1314 aa17.72■□□□□ 0.43
CACUL1-206ENST00000493518 FMNL1O95466 1100 aaPredicted RBP17.72■□□□□ 0.43
CACUL1-206ENST00000493518 VEGFAP15692 232 aaPredicted RBP17.72■□□□□ 0.43
CACUL1-206ENST00000493518 PTPREP23469 700 aa17.72■□□□□ 0.43
CACUL1-206ENST00000493518 GYG1P46976 350 aa17.72■□□□□ 0.43
CACUL1-206ENST00000493518 DYNLL1P63167 89 aaKnown RBP17.72■□□□□ 0.43
CACUL1-206ENST00000493518 JAKMIP3Q5VZ66 844 aa17.72■□□□□ 0.43
CACUL1-206ENST00000493518 PLCD3Q8N3E9 789 aa17.72■□□□□ 0.43
CACUL1-206ENST00000493518 RASGRP4Q8TDF6 673 aa17.72■□□□□ 0.43
CACUL1-206ENST00000493518 DZIP3Q86Y13 1208 aaKnown RBP17.72■□□□□ 0.43
CACUL1-206ENST00000493518 ACSBG1Q96GR2 724 aa17.72■□□□□ 0.43
CACUL1-206ENST00000493518 MRFAP1Q9Y605 127 aa17.72■□□□□ 0.43
CACUL1-206ENST00000493518 TNKSO95271 1327 aa17.71■□□□□ 0.43
CACUL1-206ENST00000493518 ZRANB2O95218 330 aaKnown RBP eCLIP17.71■□□□□ 0.43
CACUL1-206ENST00000493518 TNNT3P45378 269 aaPredicted RBP17.71■□□□□ 0.43
CACUL1-206ENST00000493518 KCNQ4P56696 695 aa17.71■□□□□ 0.43
CACUL1-206ENST00000493518 RILPL1Q5EBL4 403 aa17.71■□□□□ 0.43
CACUL1-206ENST00000493518 PIK3AP1Q6ZUJ8 805 aa17.71■□□□□ 0.43
CACUL1-206ENST00000493518 PCMTD1Q96MG8 357 aaPredicted RBP17.71■□□□□ 0.43
CACUL1-206ENST00000493518 CALCOCO1Q9P1Z2 691 aa17.71■□□□□ 0.43
CACUL1-206ENST00000493518 H3BQF6 201 aa17.71■□□□□ 0.43
CACUL1-206ENST00000493518 STX10O60499 249 aa17.71■□□□□ 0.43
CACUL1-206ENST00000493518 CYP2C19P33261 490 aa17.71■□□□□ 0.43
CACUL1-206ENST00000493518 MAP3K9P80192 1104 aa17.71■□□□□ 0.43
CACUL1-206ENST00000493518 CRACR2BQ8N4Y2 399 aaPredicted RBP17.71■□□□□ 0.43
CACUL1-206ENST00000493518 MLKLQ8NB16 471 aa17.71■□□□□ 0.43
CACUL1-206ENST00000493518 TRIM34Q9BYJ4 488 aa17.71■□□□□ 0.43
CACUL1-206ENST00000493518 UBE3CQ15386 1083 aa17.7■□□□□ 0.42
CACUL1-206ENST00000493518 GIGYF2Q6Y7W6 1299 aaKnown RBP17.7■□□□□ 0.42
CACUL1-206ENST00000493518 DRC1Q96MC2 740 aa17.7■□□□□ 0.42
CACUL1-206ENST00000493518 PNKPQ96T60 521 aa17.7■□□□□ 0.42
CACUL1-206ENST00000493518 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.7■□□□□ 0.42
CACUL1-206ENST00000493518 HDAC6Q9UBN7 1215 aa17.7■□□□□ 0.42
CACUL1-206ENST00000493518 RNF225M0QZC1 329 aaPredicted RBP17.7■□□□□ 0.42
CACUL1-206ENST00000493518 SRGAP2O75044 1071 aa17.7■□□□□ 0.42
CACUL1-206ENST00000493518 IFNAR1P17181 557 aa17.7■□□□□ 0.42
CACUL1-206ENST00000493518 MDM2Q00987 491 aaPredicted RBP17.7■□□□□ 0.42
CACUL1-206ENST00000493518 DPYDQ12882 1025 aa17.7■□□□□ 0.42
CACUL1-206ENST00000493518 FILIP1LQ4L180 1135 aa17.7■□□□□ 0.42
CACUL1-206ENST00000493518 DACH1Q9UI36 760 aa17.7■□□□□ 0.42
CACUL1-206ENST00000493518 TRIM66O15016 1216 aa17.7■□□□□ 0.42
CACUL1-206ENST00000493518 SLC5A1P13866 664 aa17.7■□□□□ 0.42
CACUL1-206ENST00000493518 ADGRA1Q86SQ6 560 aa17.7■□□□□ 0.42
CACUL1-206ENST00000493518 MRC1P22897 1456 aa17.69■□□□□ 0.42
CACUL1-206ENST00000493518 TRIM49BA6NDI0 452 aa17.69■□□□□ 0.42
CACUL1-206ENST00000493518 DNA2P51530 1060 aa17.69■□□□□ 0.42
CACUL1-206ENST00000493518 PUM3Q15397 648 aaKnown RBP17.69■□□□□ 0.42
CACUL1-206ENST00000493518 WASF1Q92558 559 aa17.69■□□□□ 0.42
CACUL1-206ENST00000493518 SRRTQ9BXP5 876 aaKnown RBP17.69■□□□□ 0.42
CACUL1-206ENST00000493518 ATG3Q9NT62 314 aa17.69■□□□□ 0.42
CACUL1-206ENST00000493518 DEXIO95424 95 aa17.69■□□□□ 0.42
CACUL1-206ENST00000493518 PTGDRQ13258 359 aa17.69■□□□□ 0.42
CACUL1-206ENST00000493518 MORC3Q14149 939 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms