RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 ZYXQ15942 572 aaKnown RBP7.19□□□□□ -1.26
NF1-215ENST00000493220 ZNF713Q8N859 430 aaPredicted RBP7.19□□□□□ -1.26
NF1-215ENST00000493220 TSG101Q99816 390 aa7.19□□□□□ -1.26
NF1-215ENST00000493220 CNOT7Q9UIV1 285 aaKnown RBP7.19□□□□□ -1.26
NF1-215ENST00000493220 ZNF609O15014 1411 aa7.19□□□□□ -1.26
NF1-215ENST00000493220 AK2P54819 239 aa7.19□□□□□ -1.26
NF1-215ENST00000493220 TMEM179Q6ZVK1 233 aa7.19□□□□□ -1.26
NF1-215ENST00000493220 KRT26Q7Z3Y9 468 aa7.19□□□□□ -1.26
NF1-215ENST00000493220 BRAPQ7Z569 592 aa7.19□□□□□ -1.26
NF1-215ENST00000493220 PPP2R3BQ9Y5P8 575 aa7.19□□□□□ -1.26
NF1-215ENST00000493220 MYCNP04198 464 aaPredicted RBP7.19□□□□□ -1.26
NF1-215ENST00000493220 FKBP1AP62942 108 aaKnown RBP7.19□□□□□ -1.26
NF1-215ENST00000493220 DYNLL1P63167 89 aaKnown RBP7.19□□□□□ -1.26
NF1-215ENST00000493220 GPATCH4Q5T3I0 446 aaKnown RBP7.19□□□□□ -1.26
NF1-215ENST00000493220 FAM160B2Q86V87 743 aa7.19□□□□□ -1.26
NF1-215ENST00000493220 LCORLQ8N3X6 602 aa7.19□□□□□ -1.26
NF1-215ENST00000493220 PSMD14O00487 310 aa7.19□□□□□ -1.26
NF1-215ENST00000493220 TM4SF1P30408 202 aa7.19□□□□□ -1.26
NF1-215ENST00000493220 C8orf34Q49A92 452 aa7.19□□□□□ -1.26
NF1-215ENST00000493220 FAM47AQ5JRC9 791 aa7.19□□□□□ -1.26
NF1-215ENST00000493220 C9orf131Q5VYM1 1079 aa7.19□□□□□ -1.26
NF1-215ENST00000493220 FBXO33Q7Z6M2 555 aa7.19□□□□□ -1.26
NF1-215ENST00000493220 RAB11FIP4Q86YS3 637 aa7.19□□□□□ -1.26
NF1-215ENST00000493220 LRRC4BQ9NT99 713 aa7.19□□□□□ -1.26
NF1-215ENST00000493220 GINM1Q9NU53 330 aa7.19□□□□□ -1.26
NF1-215ENST00000493220 HERC5Q9UII4 1024 aaKnown RBP7.19□□□□□ -1.26
NF1-215ENST00000493220 PRDM1O75626 825 aa7.18□□□□□ -1.26
NF1-215ENST00000493220 ASNSP08243 561 aa7.18□□□□□ -1.26
NF1-215ENST00000493220 GSPT1P15170 499 aaKnown RBP7.18□□□□□ -1.26
NF1-215ENST00000493220 GALNT17Q6IS24 598 aa7.18□□□□□ -1.26
NF1-215ENST00000493220 SH3RF3Q8TEJ3 882 aaPredicted RBP7.18□□□□□ -1.26
NF1-215ENST00000493220 KIFC2Q96AC6 838 aa7.18□□□□□ -1.26
NF1-215ENST00000493220 INTS4Q96HW7 963 aaKnown RBP7.18□□□□□ -1.26
NF1-215ENST00000493220 GTPBP4Q9BZE4 634 aaKnown RBP7.18□□□□□ -1.26
NF1-215ENST00000493220 TNMDQ9H2S6 317 aa7.18□□□□□ -1.26
NF1-215ENST00000493220 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.18□□□□□ -1.26
NF1-215ENST00000493220 ENTPD3O75355 529 aa7.18□□□□□ -1.26
NF1-215ENST00000493220 PRPF40AO75400 957 aaKnown RBP7.18□□□□□ -1.26
NF1-215ENST00000493220 DHX8Q14562 1220 aaKnown RBP7.18□□□□□ -1.26
NF1-215ENST00000493220 SLFN13Q68D06 897 aa7.18□□□□□ -1.26
NF1-215ENST00000493220 ATL3Q6DD88 541 aa7.18□□□□□ -1.26
NF1-215ENST00000493220 KRT25Q7Z3Z0 450 aa7.18□□□□□ -1.26
NF1-215ENST00000493220 NLRX1Q86UT6 975 aa7.18□□□□□ -1.26
NF1-215ENST00000493220 VTI1AQ96AJ9 217 aa7.18□□□□□ -1.26
NF1-215ENST00000493220 ADARB2Q9NS39 739 aaKnown RBP7.18□□□□□ -1.26
NF1-215ENST00000493220 PDS5AQ29RF7 1337 aaKnown RBP7.18□□□□□ -1.26
NF1-215ENST00000493220 PTPDC1A2A3K4 754 aa7.18□□□□□ -1.26
NF1-215ENST00000493220 ZBTB22O15209 634 aa7.18□□□□□ -1.26
NF1-215ENST00000493220 FGFR1OPO95684 399 aaKnown RBP7.18□□□□□ -1.26
NF1-215ENST00000493220 GUCY1B3Q02153 619 aa7.18□□□□□ -1.26
NF1-215ENST00000493220 USP17L2Q6R6M4 530 aa7.18□□□□□ -1.26
NF1-215ENST00000493220 EDC3Q96F86 508 aaKnown RBP7.18□□□□□ -1.26
NF1-215ENST00000493220 IPO7O95373 1038 aaKnown RBP7.18□□□□□ -1.26
NF1-215ENST00000493220 FGAP02671 866 aa7.18□□□□□ -1.26
NF1-215ENST00000493220 HOXA10P31260 410 aaPredicted RBP7.18□□□□□ -1.26
NF1-215ENST00000493220 COPB2P35606 906 aa7.18□□□□□ -1.26
NF1-215ENST00000493220 CHST3Q7LGC8 479 aa7.18□□□□□ -1.26
NF1-215ENST00000493220 APBB1IPQ7Z5R6 666 aaPredicted RBP7.18□□□□□ -1.26
NF1-215ENST00000493220 SIRT2Q8IXJ6 389 aa7.18□□□□□ -1.26
NF1-215ENST00000493220 PI4K2BQ8TCG2 481 aa7.18□□□□□ -1.26
NF1-215ENST00000493220 DCAF4Q8WV16 495 aa7.18□□□□□ -1.26
NF1-215ENST00000493220 CLGNO14967 610 aa7.18□□□□□ -1.26
NF1-215ENST00000493220 CTAGE5O15320 804 aa7.18□□□□□ -1.26
NF1-215ENST00000493220 CYP2E1P05181 493 aaPredicted RBP7.18□□□□□ -1.26
NF1-215ENST00000493220 DIXDC1Q155Q3 683 aa7.18□□□□□ -1.26
NF1-215ENST00000493220 CCDC174Q6PII3 467 aa7.18□□□□□ -1.26
NF1-215ENST00000493220 SKAP1Q86WV1 359 aa7.18□□□□□ -1.26
NF1-215ENST00000493220 TDRD7Q8NHU6 1098 aaKnown RBP7.18□□□□□ -1.26
NF1-215ENST00000493220 KCNG4Q8TDN1 519 aa7.18□□□□□ -1.26
NF1-215ENST00000493220 GTF3C2Q8WUA4 911 aaPredicted RBP7.18□□□□□ -1.26
NF1-215ENST00000493220 ZNF274Q96GC6 653 aaPredicted RBP7.18□□□□□ -1.26
NF1-215ENST00000493220 GMPSP49915 693 aaPredicted RBP7.17□□□□□ -1.26
NF1-215ENST00000493220 SCARF1Q14162 830 aa7.17□□□□□ -1.26
NF1-215ENST00000493220 CKAP2LQ8IYA6 745 aa7.17□□□□□ -1.26
NF1-215ENST00000493220 ANTXR1Q9H6X2 564 aa7.17□□□□□ -1.26
NF1-215ENST00000493220 SPC25Q9HBM1 224 aa7.17□□□□□ -1.26
NF1-215ENST00000493220 MYOZ2Q9NPC6 264 aa7.17□□□□□ -1.26
NF1-215ENST00000493220 RABGAP1Q9Y3P9 1069 aa7.17□□□□□ -1.26
NF1-215ENST00000493220 ZMYM6O95789 1325 aa7.17□□□□□ -1.26
NF1-215ENST00000493220 USP54Q70EL1 1684 aa7.17□□□□□ -1.26
NF1-215ENST00000493220 USP17L5A8MUK1 530 aa7.17□□□□□ -1.26
NF1-215ENST00000493220 NPM3O75607 178 aaKnown RBP7.17□□□□□ -1.26
NF1-215ENST00000493220 CHMP4BP1P59074 171 aa7.17□□□□□ -1.26
NF1-215ENST00000493220 DDR1Q08345 913 aa7.17□□□□□ -1.26
NF1-215ENST00000493220 FHDC1Q9C0D6 1143 aaPredicted RBP7.17□□□□□ -1.26
NF1-215ENST00000493220 FLOT1O75955 427 aa7.17□□□□□ -1.26
NF1-215ENST00000493220 ZNF654Q8IZM8 581 aa7.17□□□□□ -1.26
NF1-215ENST00000493220 TTC14Q96N46 770 aa7.17□□□□□ -1.26
NF1-215ENST00000493220 PALD1Q9ULE6 856 aa7.17□□□□□ -1.26
NF1-215ENST00000493220 ZSCAN22P10073 491 aaPredicted RBP7.17□□□□□ -1.26
NF1-215ENST00000493220 UBA7P41226 1012 aa7.17□□□□□ -1.26
NF1-215ENST00000493220 FASTKD5Q7L8L6 764 aaKnown RBP7.17□□□□□ -1.26
NF1-215ENST00000493220 NECAB1Q8N987 351 aa7.17□□□□□ -1.26
NF1-215ENST00000493220 SLC4A9Q96Q91 983 aa7.17□□□□□ -1.26
NF1-215ENST00000493220 TDRD3Q9H7E2 651 aaKnown RBP7.17□□□□□ -1.26
NF1-215ENST00000493220 GPHNQ9NQX3 736 aaPredicted RBP7.17□□□□□ -1.26
NF1-215ENST00000493220 TNKSO95271 1327 aa7.17□□□□□ -1.26
NF1-215ENST00000493220 TRIM75PA6NK02 468 aa7.16□□□□□ -1.26
NF1-215ENST00000493220 GCOM1H8Y6P7 765 aaPredicted RBP7.16□□□□□ -1.26
NF1-215ENST00000493220 TBCAO75347 108 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms