RNA–Protein interactions for RNA: ENST00000491936.5

TMEM50A-205, Transcript of transmembrane protein 50A, humanhuman

TSL 1 (best)

Gene TMEM50A, Length 965 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-205ENST00000491936 MAP3K14Q99558 947 aa17.58■□□□□ 0.4
TMEM50A-205ENST00000491936 CYP2D7A0A087X1C5 515 aa17.57■□□□□ 0.4
TMEM50A-205ENST00000491936 SPDYE2BA6NHP3 402 aa17.57■□□□□ 0.4
TMEM50A-205ENST00000491936 FIBPO43427 364 aa17.57■□□□□ 0.4
TMEM50A-205ENST00000491936 POLR3DP05423 398 aaPredicted RBP17.57■□□□□ 0.4
TMEM50A-205ENST00000491936 SPDYE6P0CI01 402 aa17.57■□□□□ 0.4
TMEM50A-205ENST00000491936 CDC27P30260 824 aa17.57■□□□□ 0.4
TMEM50A-205ENST00000491936 MRE11P49959 708 aa17.57■□□□□ 0.4
TMEM50A-205ENST00000491936 RHBDL3P58872 404 aa17.57■□□□□ 0.4
TMEM50A-205ENST00000491936 SPDYE2Q495Y8 402 aa17.57■□□□□ 0.4
TMEM50A-205ENST00000491936 C9orf131Q5VYM1 1079 aa17.57■□□□□ 0.4
TMEM50A-205ENST00000491936 CAVIN1Q6NZI2 390 aaKnown RBP17.57■□□□□ 0.4
TMEM50A-205ENST00000491936 FERMT3Q86UX7 667 aa17.57■□□□□ 0.4
TMEM50A-205ENST00000491936 ENAHQ8N8S7 591 aaPredicted RBP17.57■□□□□ 0.4
TMEM50A-205ENST00000491936 SENP2Q9HC62 589 aa17.57■□□□□ 0.4
TMEM50A-205ENST00000491936 LAMB1P07942 1786 aa17.56■□□□□ 0.4
TMEM50A-205ENST00000491936 USP17L8P0C7I0 530 aa17.56■□□□□ 0.4
TMEM50A-205ENST00000491936 KIAA2012Q0VF49 1180 aa17.56■□□□□ 0.4
TMEM50A-205ENST00000491936 TRIM29Q14134 588 aa17.56■□□□□ 0.4
TMEM50A-205ENST00000491936 ZSCAN23Q3MJ62 389 aa17.56■□□□□ 0.4
TMEM50A-205ENST00000491936 SOGA3Q5TF21 947 aa17.56■□□□□ 0.4
TMEM50A-205ENST00000491936 ZNF444Q8N0Y2 327 aaPredicted RBP17.56■□□□□ 0.4
TMEM50A-205ENST00000491936 CHAMP1Q96JM3 812 aa17.56■□□□□ 0.4
TMEM50A-205ENST00000491936 SPATA32Q96LK8 384 aa17.56■□□□□ 0.4
TMEM50A-205ENST00000491936 ALG1Q9BT22 464 aa17.56■□□□□ 0.4
TMEM50A-205ENST00000491936 DAGLAQ9Y4D2 1042 aa17.56■□□□□ 0.4
TMEM50A-205ENST00000491936 TSPY2A6NKD2 308 aa17.55■□□□□ 0.4
TMEM50A-205ENST00000491936 DOK7Q18PE1 504 aa17.55■□□□□ 0.4
TMEM50A-205ENST00000491936 FOXD4L6Q3SYB3 417 aaPredicted RBP17.55■□□□□ 0.4
TMEM50A-205ENST00000491936 FOXD4L3Q6VB84 417 aaPredicted RBP17.55■□□□□ 0.4
TMEM50A-205ENST00000491936 TTC6Q86TZ1 520 aa17.55■□□□□ 0.4
TMEM50A-205ENST00000491936 CRACR2BQ8N4Y2 399 aaPredicted RBP17.55■□□□□ 0.4
TMEM50A-205ENST00000491936 TEKT1Q969V4 418 aa17.55■□□□□ 0.4
TMEM50A-205ENST00000491936 PSMD1Q99460 953 aa17.55■□□□□ 0.4
TMEM50A-205ENST00000491936 ZKSCAN3Q9BRR0 538 aa17.55■□□□□ 0.4
TMEM50A-205ENST00000491936 RNF26Q9BY78 433 aaPredicted RBP17.55■□□□□ 0.4
TMEM50A-205ENST00000491936 MKNK2Q9HBH9 465 aa17.55■□□□□ 0.4
TMEM50A-205ENST00000491936 GDPD2Q9HCC8 539 aa17.55■□□□□ 0.4
TMEM50A-205ENST00000491936 RCOR1Q9UKL0 485 aa17.55■□□□□ 0.4
TMEM50A-205ENST00000491936 TTF2Q9UNY4 1162 aaKnown RBP17.55■□□□□ 0.4
TMEM50A-205ENST00000491936 SLX4Q8IY92 1834 aa17.55■□□□□ 0.4
TMEM50A-205ENST00000491936 SNED1Q8TER0 1413 aa17.55■□□□□ 0.4
TMEM50A-205ENST00000491936 USP17L3A6NCW0 530 aa17.54■□□□□ 0.4
TMEM50A-205ENST00000491936 USP17L4A6NCW7 530 aa17.54■□□□□ 0.4
TMEM50A-205ENST00000491936 GOLGA6L4A6NEF3 574 aa17.54■□□□□ 0.4
TMEM50A-205ENST00000491936 KIF3CO14782 793 aa17.54■□□□□ 0.4
TMEM50A-205ENST00000491936 DEXIO95424 95 aa17.54■□□□□ 0.4
TMEM50A-205ENST00000491936 CYP2D6P10635 497 aa17.54■□□□□ 0.4
TMEM50A-205ENST00000491936 PRELPP51888 382 aa17.54■□□□□ 0.4
TMEM50A-205ENST00000491936 RASSF7Q02833 373 aa17.54■□□□□ 0.4
TMEM50A-205ENST00000491936 CCDC93Q567U6 631 aa17.54■□□□□ 0.4
TMEM50A-205ENST00000491936 C16orf86Q6ZW13 317 aa17.54■□□□□ 0.4
TMEM50A-205ENST00000491936 USP17L1Q7RTZ2 530 aa17.54■□□□□ 0.4
TMEM50A-205ENST00000491936 CERS5Q8N5B7 392 aa17.54■□□□□ 0.4
TMEM50A-205ENST00000491936 LEO1Q8WVC0 666 aaPredicted RBP17.54■□□□□ 0.4
TMEM50A-205ENST00000491936 ZDHHC15Q96MV8 337 aa17.54■□□□□ 0.4
TMEM50A-205ENST00000491936 RBM27Q9P2N5 1060 aaKnown RBP17.54■□□□□ 0.4
TMEM50A-205ENST00000491936 FER1L6Q2WGJ9 1857 aa17.54■□□□□ 0.4
TMEM50A-205ENST00000491936 FLT1P17948 1338 aa17.53■□□□□ 0.4
TMEM50A-205ENST00000491936 MYH2Q9UKX2 1941 aa17.53■□□□□ 0.4
TMEM50A-205ENST00000491936 GADD45BO75293 160 aaPredicted RBP17.53■□□□□ 0.4
TMEM50A-205ENST00000491936 XBP1P17861 261 aa17.53■□□□□ 0.4
TMEM50A-205ENST00000491936 KIF5BP33176 963 aa17.53■□□□□ 0.4
TMEM50A-205ENST00000491936 TFAP4Q01664 338 aa17.53■□□□□ 0.4
TMEM50A-205ENST00000491936 TROAPQ12815 778 aa17.53■□□□□ 0.4
TMEM50A-205ENST00000491936 CCDC183Q5T5S1 534 aa17.53■□□□□ 0.4
TMEM50A-205ENST00000491936 OLFM4Q6UX06 510 aa17.53■□□□□ 0.4
TMEM50A-205ENST00000491936 MAPKAPK5Q8IW41 473 aa17.53■□□□□ 0.4
TMEM50A-205ENST00000491936 STK11IPQ8N1F8 1099 aa17.53■□□□□ 0.4
TMEM50A-205ENST00000491936 RNF181Q9P0P0 153 aa17.53■□□□□ 0.4
TMEM50A-205ENST00000491936 MYO3BQ8WXR4 1341 aa17.52■□□□□ 0.4
TMEM50A-205ENST00000491936 NFKBIEO00221 500 aa17.52■□□□□ 0.4
TMEM50A-205ENST00000491936 PRPF3O43395 683 aaKnown RBP17.52■□□□□ 0.4
TMEM50A-205ENST00000491936 ECE2O60344 883 aa17.52■□□□□ 0.4
TMEM50A-205ENST00000491936 DTNBO60941 627 aa17.52■□□□□ 0.4
TMEM50A-205ENST00000491936 PRDM1O75626 825 aa17.52■□□□□ 0.4
TMEM50A-205ENST00000491936 GNAQP50148 359 aa17.52■□□□□ 0.4
TMEM50A-205ENST00000491936 AKAP17AQ02040 695 aaKnown RBP17.52■□□□□ 0.4
TMEM50A-205ENST00000491936 DACT2Q5SW24 774 aa17.52■□□□□ 0.4
TMEM50A-205ENST00000491936 NBPF11Q86T75 865 aa17.52■□□□□ 0.4
TMEM50A-205ENST00000491936 RAB11FIP4Q86YS3 637 aa17.52■□□□□ 0.4
TMEM50A-205ENST00000491936 CTCFLQ8NI51 663 aaPredicted RBP17.52■□□□□ 0.4
TMEM50A-205ENST00000491936 FBXW7Q969H0 707 aa17.52■□□□□ 0.4
TMEM50A-205ENST00000491936 SLC26A6Q9BXS9 759 aa17.52■□□□□ 0.4
TMEM50A-205ENST00000491936 RTEL1Q9NZ71 1219 aa17.52■□□□□ 0.4
TMEM50A-205ENST00000491936 TMEM63CQ9P1W3 806 aa17.52■□□□□ 0.4
TMEM50A-205ENST00000491936 SWAP70Q9UH65 585 aa17.52■□□□□ 0.4
TMEM50A-205ENST00000491936 SERPINA10Q9UK55 444 aa17.52■□□□□ 0.4
TMEM50A-205ENST00000491936 YEATS4O95619 227 aa17.51■□□□□ 0.39
TMEM50A-205ENST00000491936 RXRAP19793 462 aa17.51■□□□□ 0.39
TMEM50A-205ENST00000491936 KIF23Q02241 960 aaPredicted RBP17.51■□□□□ 0.39
TMEM50A-205ENST00000491936 SAFBQ15424 915 aaKnown RBP eCLIP17.51■□□□□ 0.39
TMEM50A-205ENST00000491936 PPP4R3BQ5MIZ7 849 aa17.51■□□□□ 0.39
TMEM50A-205ENST00000491936 KRT40Q6A162 431 aa17.51■□□□□ 0.39
TMEM50A-205ENST00000491936 LRSAM1Q6UWE0 723 aa17.51■□□□□ 0.39
TMEM50A-205ENST00000491936 NEDD1Q8NHV4 660 aa17.51■□□□□ 0.39
TMEM50A-205ENST00000491936 NUP133Q8WUM0 1156 aa17.51■□□□□ 0.39
TMEM50A-205ENST00000491936 MYL10Q9BUA6 226 aa17.51■□□□□ 0.39
TMEM50A-205ENST00000491936 KAT14Q9H8E8 782 aa17.51■□□□□ 0.39
TMEM50A-205ENST00000491936 USP40Q9NVE5 1235 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms