RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 ERO1BQ86YB8 467 aa9.83□□□□□ -0.84
SF3A1-208ENST00000485618 SCYL3Q8IZE3 742 aa9.83□□□□□ -0.84
SF3A1-208ENST00000485618 SEC62Q99442 399 aaKnown RBP9.83□□□□□ -0.84
SF3A1-208ENST00000485618 DSCC1Q9BVC3 393 aa9.83□□□□□ -0.84
SF3A1-208ENST00000485618 AS3MTQ9HBK9 375 aa9.83□□□□□ -0.84
SF3A1-208ENST00000485618 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.83□□□□□ -0.84
SF3A1-208ENST00000485618 GTF3C3Q9Y5Q9 886 aa9.83□□□□□ -0.84
SF3A1-208ENST00000485618 U3KPZ7 1027 aaPredicted RBP9.83□□□□□ -0.84
SF3A1-208ENST00000485618 REC8O95072 547 aa9.82□□□□□ -0.84
SF3A1-208ENST00000485618 CAP2P40123 477 aa9.82□□□□□ -0.84
SF3A1-208ENST00000485618 TM4SF4P48230 202 aa9.82□□□□□ -0.84
SF3A1-208ENST00000485618 PLCD1P51178 756 aa9.82□□□□□ -0.84
SF3A1-208ENST00000485618 PPATQ06203 517 aa9.82□□□□□ -0.84
SF3A1-208ENST00000485618 ABCB5Q2M3G0 1257 aa9.82□□□□□ -0.84
SF3A1-208ENST00000485618 NOL9Q5SY16 702 aaKnown RBP9.82□□□□□ -0.84
SF3A1-208ENST00000485618 RNF20Q5VTR2 975 aa9.82□□□□□ -0.84
SF3A1-208ENST00000485618 SH2D4AQ9H788 454 aa9.82□□□□□ -0.84
SF3A1-208ENST00000485618 ZMYM6O95789 1325 aa9.82□□□□□ -0.84
SF3A1-208ENST00000485618 MANSC4A6NHS7 340 aaPredicted RBP9.81□□□□□ -0.84
SF3A1-208ENST00000485618 USP17L5A8MUK1 530 aa9.81□□□□□ -0.84
SF3A1-208ENST00000485618 PHF20L1A8MW92 1017 aa9.81□□□□□ -0.84
SF3A1-208ENST00000485618 CXCL11O14625 94 aa9.81□□□□□ -0.84
SF3A1-208ENST00000485618 SGSM2O43147 1006 aa9.81□□□□□ -0.84
SF3A1-208ENST00000485618 FKTNO75072 461 aa9.81□□□□□ -0.84
SF3A1-208ENST00000485618 FGAP02671 866 aa9.81□□□□□ -0.84
SF3A1-208ENST00000485618 CHGBP05060 677 aa9.81□□□□□ -0.84
SF3A1-208ENST00000485618 GTF2A2P52657 109 aa9.81□□□□□ -0.84
SF3A1-208ENST00000485618 PPARAQ07869 468 aa9.81□□□□□ -0.84
SF3A1-208ENST00000485618 TRDNQ13061 729 aa9.81□□□□□ -0.84
SF3A1-208ENST00000485618 SNAPC2Q13487 334 aa9.81□□□□□ -0.84
SF3A1-208ENST00000485618 VGLL4Q14135 290 aa9.81□□□□□ -0.84
SF3A1-208ENST00000485618 NOM1Q5C9Z4 860 aaKnown RBP9.81□□□□□ -0.84
SF3A1-208ENST00000485618 SPRYD7Q5W111 196 aa9.81□□□□□ -0.84
SF3A1-208ENST00000485618 TATDN1Q6P1N9 297 aa9.81□□□□□ -0.84
SF3A1-208ENST00000485618 FBXO46Q6PJ61 603 aaPredicted RBP9.81□□□□□ -0.84
SF3A1-208ENST00000485618 CCDC129Q6ZRS4 1044 aa9.81□□□□□ -0.84
SF3A1-208ENST00000485618 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.81□□□□□ -0.84
SF3A1-208ENST00000485618 ZKSCAN4Q969J2 545 aaPredicted RBP9.81□□□□□ -0.84
SF3A1-208ENST00000485618 ESYT1Q9BSJ8 1104 aa9.81□□□□□ -0.84
SF3A1-208ENST00000485618 ELP3Q9H9T3 547 aa9.81□□□□□ -0.84
SF3A1-208ENST00000485618 SSC5DA1L4H1 1573 aa9.8□□□□□ -0.84
SF3A1-208ENST00000485618 SPDYE5A6NIY4 337 aa9.8□□□□□ -0.84
SF3A1-208ENST00000485618 MPHOSPH10O00566 681 aaKnown RBP9.8□□□□□ -0.84
SF3A1-208ENST00000485618 ALDH1A1P00352 501 aa9.8□□□□□ -0.84
SF3A1-208ENST00000485618 CETPP11597 493 aa9.8□□□□□ -0.84
SF3A1-208ENST00000485618 CDK8P49336 464 aa9.8□□□□□ -0.84
SF3A1-208ENST00000485618 GABPAQ06546 454 aa9.8□□□□□ -0.84
SF3A1-208ENST00000485618 PPIL2Q13356 520 aa9.8□□□□□ -0.84
SF3A1-208ENST00000485618 SLC4A8Q2Y0W8 1093 aa9.8□□□□□ -0.84
SF3A1-208ENST00000485618 CCDC178Q5BJE1 867 aa9.8□□□□□ -0.84
SF3A1-208ENST00000485618 MFSD6Q6ZSS7 791 aa9.8□□□□□ -0.84
SF3A1-208ENST00000485618 TMEM179Q6ZVK1 233 aa9.8□□□□□ -0.84
SF3A1-208ENST00000485618 C16orf86Q6ZW13 317 aa9.8□□□□□ -0.84
SF3A1-208ENST00000485618 FASTKD5Q7L8L6 764 aaKnown RBP9.8□□□□□ -0.84
SF3A1-208ENST00000485618 CDAN1Q8IWY9 1227 aa9.8□□□□□ -0.84
SF3A1-208ENST00000485618 OPTNQ96CV9 577 aa9.8□□□□□ -0.84
SF3A1-208ENST00000485618 OTUD5Q96G74 571 aa9.8□□□□□ -0.84
SF3A1-208ENST00000485618 WNK4Q96J92 1243 aa9.8□□□□□ -0.84
SF3A1-208ENST00000485618 CNNM2Q9H8M5 875 aa9.8□□□□□ -0.84
SF3A1-208ENST00000485618 ANO2Q9NQ90 1003 aa9.8□□□□□ -0.84
SF3A1-208ENST00000485618 ANAPC4Q9UJX5 808 aa9.8□□□□□ -0.84
SF3A1-208ENST00000485618 FZD1Q9UP38 647 aa9.8□□□□□ -0.84
SF3A1-208ENST00000485618 ZHX2Q9Y6X8 837 aa9.8□□□□□ -0.84
SF3A1-208ENST00000485618 C19orf81C9J6K1 198 aa9.79□□□□□ -0.84
SF3A1-208ENST00000485618 EPB41L2O43491 1005 aaKnown RBP9.79□□□□□ -0.84
SF3A1-208ENST00000485618 TSPY3P0CV98 308 aa9.79□□□□□ -0.84
SF3A1-208ENST00000485618 TSPY8P0CW00 308 aa9.79□□□□□ -0.84
SF3A1-208ENST00000485618 ZKSCAN1P17029 563 aaPredicted RBP9.79□□□□□ -0.84
SF3A1-208ENST00000485618 PTPRAP18433 802 aa9.79□□□□□ -0.84
SF3A1-208ENST00000485618 MCCP23508 829 aa9.79□□□□□ -0.84
SF3A1-208ENST00000485618 INPP5BP32019 993 aa9.79□□□□□ -0.84
SF3A1-208ENST00000485618 USP14P54578 494 aa9.79□□□□□ -0.84
SF3A1-208ENST00000485618 PABPC4Q13310 644 aaKnown RBP eCLIP9.79□□□□□ -0.84
SF3A1-208ENST00000485618 RAB3GAP1Q15042 981 aa9.79□□□□□ -0.84
SF3A1-208ENST00000485618 VPS53Q5VIR6 699 aa9.79□□□□□ -0.84
SF3A1-208ENST00000485618 ZNF589Q86UQ0 364 aaPredicted RBP9.79□□□□□ -0.84
SF3A1-208ENST00000485618 ZNF280CQ8ND82 737 aa9.79□□□□□ -0.84
SF3A1-208ENST00000485618 WDR18Q9BV38 432 aa9.79□□□□□ -0.84
SF3A1-208ENST00000485618 CFHR5Q9BXR6 569 aa9.79□□□□□ -0.84
SF3A1-208ENST00000485618 KRT23Q9C075 422 aa9.79□□□□□ -0.84
SF3A1-208ENST00000485618 R3HDMLQ9H3Y0 253 aa9.79□□□□□ -0.84
SF3A1-208ENST00000485618 KANSL2Q9H9L4 492 aa9.79□□□□□ -0.84
SF3A1-208ENST00000485618 ARHGEF10LQ9HCE6 1279 aa9.79□□□□□ -0.84
SF3A1-208ENST00000485618 TOMM22Q9NS69 142 aa9.79□□□□□ -0.84
SF3A1-208ENST00000485618 TMOD4Q9NZQ9 345 aa9.79□□□□□ -0.84
SF3A1-208ENST00000485618 MYH1P12882 1939 aa9.79□□□□□ -0.84
SF3A1-208ENST00000485618 TSPY2A6NKD2 308 aa9.78□□□□□ -0.84
SF3A1-208ENST00000485618 RANBP6O60518 1105 aaKnown RBP9.78□□□□□ -0.84
SF3A1-208ENST00000485618 GH2P01242 217 aa9.78□□□□□ -0.84
SF3A1-208ENST00000485618 CYP2D6P10635 497 aa9.78□□□□□ -0.84
SF3A1-208ENST00000485618 SHMT1P34896 483 aa9.78□□□□□ -0.84
SF3A1-208ENST00000485618 AKNAD1Q5T1N1 836 aa9.78□□□□□ -0.84
SF3A1-208ENST00000485618 IQCA1Q86XH1 822 aa9.78□□□□□ -0.84
SF3A1-208ENST00000485618 IFNL1Q8IU54 200 aa9.78□□□□□ -0.84
SF3A1-208ENST00000485618 ESR2Q92731 530 aa9.78□□□□□ -0.84
SF3A1-208ENST00000485618 MAP4K1Q92918 833 aa9.78□□□□□ -0.84
SF3A1-208ENST00000485618 CLMNQ96JQ2 1002 aa9.78□□□□□ -0.84
SF3A1-208ENST00000485618 FEZ1Q99689 392 aa9.78□□□□□ -0.84
SF3A1-208ENST00000485618 EPB41L4AQ9HCS5 686 aaPredicted RBP9.78□□□□□ -0.84
SF3A1-208ENST00000485618 ZCCHC17Q9NP64 241 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms