RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 CCDC129Q6ZRS4 1044 aa11.57□□□□□ -0.56
HMG20B-210ENST00000483417 MAPKAPK5Q8IW41 473 aa11.57□□□□□ -0.56
HMG20B-210ENST00000483417 NOL10Q9BSC4 688 aaKnown RBP11.57□□□□□ -0.56
HMG20B-210ENST00000483417 DNAJC18Q9H819 358 aa11.57□□□□□ -0.56
HMG20B-210ENST00000483417 ARMT1Q9H993 441 aa11.57□□□□□ -0.56
HMG20B-210ENST00000483417 FLT1P17948 1338 aa11.57□□□□□ -0.56
HMG20B-210ENST00000483417 SIPA1L1O43166 1804 aa11.56□□□□□ -0.56
HMG20B-210ENST00000483417 POTEFA5A3E0 1075 aa11.56□□□□□ -0.56
HMG20B-210ENST00000483417 SMIM22K7EJ46 135 aa11.56□□□□□ -0.56
HMG20B-210ENST00000483417 GNRH1P01148 92 aa11.56□□□□□ -0.56
HMG20B-210ENST00000483417 CYP2C8P10632 490 aa11.56□□□□□ -0.56
HMG20B-210ENST00000483417 EVX2Q03828 476 aa11.56□□□□□ -0.56
HMG20B-210ENST00000483417 NMIQ13287 307 aaPredicted RBP11.56□□□□□ -0.56
HMG20B-210ENST00000483417 ZMYM1Q5SVZ6 1142 aa11.56□□□□□ -0.56
HMG20B-210ENST00000483417 LCORLQ8N3X6 602 aa11.56□□□□□ -0.56
HMG20B-210ENST00000483417 STRBPQ96SI9 672 aaKnown RBP11.56□□□□□ -0.56
HMG20B-210ENST00000483417 PALD1Q9ULE6 856 aa11.56□□□□□ -0.56
HMG20B-210ENST00000483417 PTCH2Q9Y6C5 1203 aa11.56□□□□□ -0.56
HMG20B-210ENST00000483417 MAST2Q6P0Q8 1798 aa11.56□□□□□ -0.56
HMG20B-210ENST00000483417 DOCK1Q14185 1865 aa11.55□□□□□ -0.56
HMG20B-210ENST00000483417 A0A0D9SFI3 127 aa11.55□□□□□ -0.56
HMG20B-210ENST00000483417 MAGEB6P1A0A0J9YX57 407 aa11.55□□□□□ -0.56
HMG20B-210ENST00000483417 TRIM75PA6NK02 468 aa11.55□□□□□ -0.56
HMG20B-210ENST00000483417 TNRC18O15417 2968 aaPredicted RBP11.55□□□□□ -0.56
HMG20B-210ENST00000483417 MBD4O95243 580 aa11.55□□□□□ -0.56
HMG20B-210ENST00000483417 PRMT2P55345 433 aa11.55□□□□□ -0.56
HMG20B-210ENST00000483417 SPP2Q13103 211 aa11.55□□□□□ -0.56
HMG20B-210ENST00000483417 SH3D19Q5HYK7 790 aa11.55□□□□□ -0.56
HMG20B-210ENST00000483417 ZNF280CQ8ND82 737 aa11.55□□□□□ -0.56
HMG20B-210ENST00000483417 TRIM47Q96LD4 638 aa11.55□□□□□ -0.56
HMG20B-210ENST00000483417 WDR18Q9BV38 432 aa11.55□□□□□ -0.56
HMG20B-210ENST00000483417 TBC1D2Q9BYX2 928 aa11.55□□□□□ -0.56
HMG20B-210ENST00000483417 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.55□□□□□ -0.564e-11■■■□□ 17.3
HMG20B-210ENST00000483417 CDK5RAP2Q96SN8 1893 aa11.55□□□□□ -0.56
HMG20B-210ENST00000483417 ZSWIM8A7E2V4 1837 aa11.54□□□□□ -0.56
HMG20B-210ENST00000483417 FOCADQ5VW36 1801 aa11.54□□□□□ -0.56
HMG20B-210ENST00000483417 USP17L5A8MUK1 530 aa11.54□□□□□ -0.56
HMG20B-210ENST00000483417 FOXP2O15409 715 aa11.54□□□□□ -0.56
HMG20B-210ENST00000483417 CHMLP26374 656 aa11.54□□□□□ -0.56
HMG20B-210ENST00000483417 PSMC4P43686 418 aa11.54□□□□□ -0.56
HMG20B-210ENST00000483417 SHROOM1Q2M3G4 852 aaPredicted RBP11.54□□□□□ -0.56
HMG20B-210ENST00000483417 TREML2Q5T2D2 321 aa11.54□□□□□ -0.56
HMG20B-210ENST00000483417 CWC27Q6UX04 472 aaKnown RBP11.54□□□□□ -0.56
HMG20B-210ENST00000483417 GADL1Q6ZQY3 521 aa11.54□□□□□ -0.56
HMG20B-210ENST00000483417 CERS3Q8IU89 383 aa11.54□□□□□ -0.56
HMG20B-210ENST00000483417 SDR42E1Q8WUS8 393 aa11.54□□□□□ -0.56
HMG20B-210ENST00000483417 APPBP2Q92624 585 aa11.54□□□□□ -0.56
HMG20B-210ENST00000483417 ZNF333Q96JL9 665 aa11.54□□□□□ -0.56
HMG20B-210ENST00000483417 PARK7Q99497 189 aaKnown RBP11.54□□□□□ -0.56
HMG20B-210ENST00000483417 SRRDQ9UH36 339 aa11.54□□□□□ -0.56
HMG20B-210ENST00000483417 AGTPBP1Q9UPW5 1226 aa11.54□□□□□ -0.56
HMG20B-210ENST00000483417 PTPRFP10586 1907 aa11.54□□□□□ -0.56
HMG20B-210ENST00000483417 OSBPP22059 807 aa11.53□□□□□ -0.56
HMG20B-210ENST00000483417 KIF22Q14807 665 aa11.53□□□□□ -0.56
HMG20B-210ENST00000483417 SLC4A8Q2Y0W8 1093 aa11.53□□□□□ -0.56
HMG20B-210ENST00000483417 BMP2KLQ5H9B9 411 aa11.53□□□□□ -0.56
HMG20B-210ENST00000483417 VPS53Q5VIR6 699 aa11.53□□□□□ -0.56
HMG20B-210ENST00000483417 ZSCAN25Q6NSZ9 544 aa11.53□□□□□ -0.56
HMG20B-210ENST00000483417 TATDN1Q6P1N9 297 aa11.53□□□□□ -0.56
HMG20B-210ENST00000483417 ZNF589Q86UQ0 364 aaPredicted RBP11.53□□□□□ -0.56
HMG20B-210ENST00000483417 PROCA1Q8NCQ7 364 aaPredicted RBP11.53□□□□□ -0.56
HMG20B-210ENST00000483417 GINM1Q9NU53 330 aa11.53□□□□□ -0.56
HMG20B-210ENST00000483417 SAP30BPQ9UHR5 308 aaKnown RBP11.53□□□□□ -0.56
HMG20B-210ENST00000483417 CENPFP49454 3210 aa11.52□□□□□ -0.56
HMG20B-210ENST00000483417 CYP2D7A0A087X1C5 515 aa11.52□□□□□ -0.57
HMG20B-210ENST00000483417 GSG1L2A8MUP6 293 aa11.52□□□□□ -0.57
HMG20B-210ENST00000483417 ZFYP08048 801 aaPredicted RBP11.52□□□□□ -0.57
HMG20B-210ENST00000483417 ASNSP08243 561 aa11.52□□□□□ -0.57
HMG20B-210ENST00000483417 CYP2D6P10635 497 aa11.52□□□□□ -0.57
HMG20B-210ENST00000483417 EN2P19622 333 aaPredicted RBP11.52□□□□□ -0.57
HMG20B-210ENST00000483417 BACE1P56817 501 aa11.52□□□□□ -0.57
HMG20B-210ENST00000483417 MCMDC2Q4G0Z9 681 aa11.52□□□□□ -0.57
HMG20B-210ENST00000483417 NBPF11Q86T75 865 aa11.52□□□□□ -0.57
HMG20B-210ENST00000483417 EHD4Q9H223 541 aa11.52□□□□□ -0.57
HMG20B-210ENST00000483417 GPAA1O43292 621 aa11.51□□□□□ -0.57
HMG20B-210ENST00000483417 ECM2O94769 699 aaPredicted RBP11.51□□□□□ -0.57
HMG20B-210ENST00000483417 FMNL1O95466 1100 aaPredicted RBP11.51□□□□□ -0.57
HMG20B-210ENST00000483417 HOXA7P31268 230 aaPredicted RBP11.51□□□□□ -0.57
HMG20B-210ENST00000483417 USP5P45974 858 aa11.51□□□□□ -0.57
HMG20B-210ENST00000483417 PLCD1P51178 756 aa11.51□□□□□ -0.57
HMG20B-210ENST00000483417 HMGCS2P54868 508 aa11.51□□□□□ -0.57
HMG20B-210ENST00000483417 GABPAQ06546 454 aa11.51□□□□□ -0.57
HMG20B-210ENST00000483417 SLC9C1Q4G0N8 1177 aa11.51□□□□□ -0.57
HMG20B-210ENST00000483417 CRACR2BQ8N4Y2 399 aaPredicted RBP11.51□□□□□ -0.57
HMG20B-210ENST00000483417 SH3TC2Q8TF17 1288 aa11.51□□□□□ -0.57
HMG20B-210ENST00000483417 AS3MTQ9HBK9 375 aa11.51□□□□□ -0.57
HMG20B-210ENST00000483417 HELLSQ9NRZ9 838 aa11.51□□□□□ -0.57
HMG20B-210ENST00000483417 ZBTB21Q9ULJ3 1066 aa11.51□□□□□ -0.57
HMG20B-210ENST00000483417 SLC4A4Q9Y6R1 1079 aa11.51□□□□□ -0.57
HMG20B-210ENST00000483417 RBBP6Q7Z6E9 1792 aaKnown RBP11.5□□□□□ -0.57
HMG20B-210ENST00000483417 C19orf81C9J6K1 198 aa11.5□□□□□ -0.57
HMG20B-210ENST00000483417 PATL2C9JE40 543 aaKnown RBP11.5□□□□□ -0.57
HMG20B-210ENST00000483417 GDF11O95390 407 aa11.5□□□□□ -0.57
HMG20B-210ENST00000483417 HLA-DOAP06340 250 aa11.5□□□□□ -0.57
HMG20B-210ENST00000483417 HOXD10P28358 340 aa11.5□□□□□ -0.57
HMG20B-210ENST00000483417 FCGRTP55899 365 aa11.5□□□□□ -0.57
HMG20B-210ENST00000483417 PTH1RQ03431 593 aa11.5□□□□□ -0.57
HMG20B-210ENST00000483417 TTC6Q86TZ1 520 aa11.5□□□□□ -0.57
HMG20B-210ENST00000483417 DCP1AQ9NPI6 582 aaPredicted RBP11.5□□□□□ -0.57
HMG20B-210ENST00000483417 INCENPQ9NQS7 918 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms