RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 GMIPQ9P107 970 aa6.35□□□□□ -1.39
SDHB-204ENST00000475049 PCOLCE2Q9UKZ9 415 aa6.35□□□□□ -1.39
SDHB-204ENST00000475049 DHX15O43143 795 aaKnown RBP6.34□□□□□ -1.39
SDHB-204ENST00000475049 NFICP08651 508 aa6.34□□□□□ -1.39
SDHB-204ENST00000475049 MAP4P27816 1152 aaKnown RBP6.34□□□□□ -1.39
SDHB-204ENST00000475049 ETFBP38117 255 aa6.34□□□□□ -1.39
SDHB-204ENST00000475049 YARSP54577 528 aaKnown RBP6.34□□□□□ -1.39
SDHB-204ENST00000475049 PPP2R5EQ16537 467 aa6.34□□□□□ -1.39
SDHB-204ENST00000475049 PRSS36Q5K4E3 855 aa6.34□□□□□ -1.39
SDHB-204ENST00000475049 CKAP2LQ8IYA6 745 aa6.34□□□□□ -1.39
SDHB-204ENST00000475049 PMFBP1Q8TBY8 1022 aa6.34□□□□□ -1.39
SDHB-204ENST00000475049 ACSF2Q96CM8 615 aaPredicted RBP6.34□□□□□ -1.39
SDHB-204ENST00000475049 SHDQ96IW2 340 aa6.34□□□□□ -1.39
SDHB-204ENST00000475049 TMEM87BQ96K49 555 aa6.34□□□□□ -1.39
SDHB-204ENST00000475049 MYRFLQ96LU7 910 aa6.34□□□□□ -1.39
SDHB-204ENST00000475049 DPH2Q9BQC3 489 aaPredicted RBP6.34□□□□□ -1.39
SDHB-204ENST00000475049 HIRIP3Q9BW71 556 aaPredicted RBP6.34□□□□□ -1.39
SDHB-204ENST00000475049 GSX1Q9H4S2 264 aaPredicted RBP6.34□□□□□ -1.39
SDHB-204ENST00000475049 FBRSQ9HAH7 460 aa6.34□□□□□ -1.39
SDHB-204ENST00000475049 TJP2Q9UDY2 1190 aa6.34□□□□□ -1.39
SDHB-204ENST00000475049 FAM95CA0A1B0GW59 222 aa6.33□□□□□ -1.4
SDHB-204ENST00000475049 SLC22A31A6NKX4 558 aa6.33□□□□□ -1.4
SDHB-204ENST00000475049 UPK3BL1B0FP48 263 aa6.33□□□□□ -1.4
SDHB-204ENST00000475049 UPK3BL2E5RIL1 263 aa6.33□□□□□ -1.4
SDHB-204ENST00000475049 NTF4P34130 210 aa6.33□□□□□ -1.4
SDHB-204ENST00000475049 GIPRP48546 466 aa6.33□□□□□ -1.4
SDHB-204ENST00000475049 MAP7Q14244 749 aa6.33□□□□□ -1.4
SDHB-204ENST00000475049 NFKBIBQ15653 356 aa6.33□□□□□ -1.4
SDHB-204ENST00000475049 NKG7Q16617 165 aa6.33□□□□□ -1.4
SDHB-204ENST00000475049 ARSHQ5FYA8 562 aa6.33□□□□□ -1.4
SDHB-204ENST00000475049 TMEM201Q5SNT2 666 aa6.33□□□□□ -1.4
SDHB-204ENST00000475049 SLC6A19Q695T7 634 aa6.33□□□□□ -1.4
SDHB-204ENST00000475049 OVOS1Q6IE37 1185 aa6.33□□□□□ -1.4
SDHB-204ENST00000475049 UBE3DQ7Z6J8 389 aa6.33□□□□□ -1.4
SDHB-204ENST00000475049 LSRQ86X29 649 aaPredicted RBP6.33□□□□□ -1.4
SDHB-204ENST00000475049 MCATQ8IVS2 390 aaKnown RBP6.33□□□□□ -1.4
SDHB-204ENST00000475049 DZIP1LQ8IYY4 767 aaKnown RBP6.33□□□□□ -1.4
SDHB-204ENST00000475049 PHACTR4Q8IZ21 702 aa6.33□□□□□ -1.4
SDHB-204ENST00000475049 OR6P1Q8NGX9 317 aa6.33□□□□□ -1.4
SDHB-204ENST00000475049 XAGE3Q8WTP9 111 aa6.33□□□□□ -1.4
SDHB-204ENST00000475049 TMEM40Q8WWA1 233 aa6.33□□□□□ -1.4
SDHB-204ENST00000475049 TP53INP1Q96A56 240 aa6.33□□□□□ -1.4
SDHB-204ENST00000475049 ARMC5Q96C12 935 aa6.33□□□□□ -1.4
SDHB-204ENST00000475049 ACSS3Q9H6R3 686 aa6.33□□□□□ -1.4
SDHB-204ENST00000475049 CHURC1-FNTBB4DL54 471 aa6.32□□□□□ -1.4
SDHB-204ENST00000475049 SMAD7O15105 426 aaKnown RBP6.32□□□□□ -1.4
SDHB-204ENST00000475049 RAG1P15918 1043 aa6.32□□□□□ -1.4
SDHB-204ENST00000475049 CHMP4BP1P59074 171 aa6.32□□□□□ -1.4
SDHB-204ENST00000475049 TNNI3KQ59H18 835 aa6.32□□□□□ -1.4
SDHB-204ENST00000475049 PAOXQ6QHF9 649 aa6.32□□□□□ -1.4
SDHB-204ENST00000475049 RUFY4Q6ZNE9 571 aa6.32□□□□□ -1.4
SDHB-204ENST00000475049 BEND4Q6ZU67 534 aa6.32□□□□□ -1.4
SDHB-204ENST00000475049 ANKS3Q6ZW76 656 aa6.32□□□□□ -1.4
SDHB-204ENST00000475049 FAM20CQ8IXL6 584 aa6.32□□□□□ -1.4
SDHB-204ENST00000475049 MRPL41Q8IXM3 137 aaKnown RBP6.32□□□□□ -1.4
SDHB-204ENST00000475049 ARMC10Q8N2F6 343 aa6.32□□□□□ -1.4
SDHB-204ENST00000475049 TRIM55Q9BYV6 548 aa6.32□□□□□ -1.4
SDHB-204ENST00000475049 SEMA6CQ9H3T2 930 aa6.32□□□□□ -1.4
SDHB-204ENST00000475049 PRKAG3Q9UGI9 489 aa6.32□□□□□ -1.4
SDHB-204ENST00000475049 FAM86C2PA6NEL3 165 aa6.31□□□□□ -1.4
SDHB-204ENST00000475049 DNAJA2O60884 412 aa6.31□□□□□ -1.4
SDHB-204ENST00000475049 PRAMEF13Q5VWM6 474 aa6.31□□□□□ -1.4
SDHB-204ENST00000475049 NLRC3Q7RTR2 1065 aa6.31□□□□□ -1.4
SDHB-204ENST00000475049 RBBP8NLQ8NC74 664 aaPredicted RBP6.31□□□□□ -1.4
SDHB-204ENST00000475049 ATG4CQ96DT6 458 aa6.31□□□□□ -1.4
SDHB-204ENST00000475049 TM9SF2Q99805 663 aa6.31□□□□□ -1.4
SDHB-204ENST00000475049 FOXQ1Q9C009 403 aa6.31□□□□□ -1.4
SDHB-204ENST00000475049 MEIS3P2A8K0S8 358 aa6.3□□□□□ -1.4
SDHB-204ENST00000475049 U2SURPO15042 1029 aaKnown RBP6.3□□□□□ -1.4
SDHB-204ENST00000475049 CST3P01034 146 aaPredicted RBP6.3□□□□□ -1.4
SDHB-204ENST00000475049 NME1P15531 152 aaKnown RBP6.3□□□□□ -1.4
SDHB-204ENST00000475049 GBP1P32455 592 aa6.3□□□□□ -1.4
SDHB-204ENST00000475049 SLBPQ14493 270 aaKnown RBP eCLIP6.3□□□□□ -1.4
SDHB-204ENST00000475049 SOGA3Q5TF21 947 aa6.3□□□□□ -1.4
SDHB-204ENST00000475049 ARMCX6Q7L4S7 300 aa6.3□□□□□ -1.4
SDHB-204ENST00000475049 FAM169BQ8N8A8 192 aa6.3□□□□□ -1.4
SDHB-204ENST00000475049 HNRNPLLQ8WVV9 542 aaKnown RBP6.3□□□□□ -1.4
SDHB-204ENST00000475049 DYNC1LI2O43237 492 aaPredicted RBP6.29□□□□□ -1.4
SDHB-204ENST00000475049 LRIG2O94898 1065 aa6.29□□□□□ -1.4
SDHB-204ENST00000475049 GUCY2CP25092 1073 aa6.29□□□□□ -1.4
SDHB-204ENST00000475049 CDK5R2Q13319 367 aa6.29□□□□□ -1.4
SDHB-204ENST00000475049 CDCP2Q5VXM1 449 aa6.29□□□□□ -1.4
SDHB-204ENST00000475049 LARP1BQ659C4 914 aaKnown RBP6.29□□□□□ -1.4
SDHB-204ENST00000475049 CLEC10AQ8IUN9 316 aa6.29□□□□□ -1.4
SDHB-204ENST00000475049 SLFN12Q8IYM2 578 aa6.29□□□□□ -1.4
SDHB-204ENST00000475049 MFSD2AQ8NA29 543 aa6.29□□□□□ -1.4
SDHB-204ENST00000475049 EZH1Q92800 747 aaPredicted RBP6.29□□□□□ -1.4
SDHB-204ENST00000475049 CCDC74BQ96LY2 380 aa6.29□□□□□ -1.4
SDHB-204ENST00000475049 KIF2CQ99661 725 aa6.29□□□□□ -1.4
SDHB-204ENST00000475049 MIPEPQ99797 713 aa6.29□□□□□ -1.4
SDHB-204ENST00000475049 CNNM2Q9H8M5 875 aa6.29□□□□□ -1.4
SDHB-204ENST00000475049 ACTR10Q9NZ32 417 aa6.29□□□□□ -1.4
SDHB-204ENST00000475049 STOML1Q9UBI4 398 aa6.29□□□□□ -1.4
SDHB-204ENST00000475049 RAXQ9Y2V3 346 aa6.29□□□□□ -1.4
SDHB-204ENST00000475049 POLR2BP30876 1174 aaKnown RBP6.28□□□□□ -1.4
SDHB-204ENST00000475049 CAP2P40123 477 aa6.28□□□□□ -1.4
SDHB-204ENST00000475049 RBL2Q08999 1139 aa6.28□□□□□ -1.4
SDHB-204ENST00000475049 TTC6Q86TZ1 520 aa6.28□□□□□ -1.4
SDHB-204ENST00000475049 GIMAP7Q8NHV1 300 aa6.28□□□□□ -1.4
SDHB-204ENST00000475049 SLC12A7Q9Y666 1083 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms