RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 PTPRAP18433 802 aa18.03■□□□□ 0.48
SNX13-205ENST00000471744 CHMLP26374 656 aa18.03■□□□□ 0.48
SNX13-205ENST00000471744 GJA5P36382 358 aa18.03■□□□□ 0.48
SNX13-205ENST00000471744 CERKLQ49MI3 558 aaPredicted RBP18.03■□□□□ 0.48
SNX13-205ENST00000471744 C16orf86Q6ZW13 317 aa18.03■□□□□ 0.48
SNX13-205ENST00000471744 ZNF589Q86UQ0 364 aaPredicted RBP18.03■□□□□ 0.48
SNX13-205ENST00000471744 AS3MTQ9HBK9 375 aa18.03■□□□□ 0.48
SNX13-205ENST00000471744 CABP5Q9NP86 173 aa18.03■□□□□ 0.48
SNX13-205ENST00000471744 PTPRFP10586 1907 aa18.03■□□□□ 0.48
SNX13-205ENST00000471744 USP17L5A8MUK1 530 aa18.02■□□□□ 0.48
SNX13-205ENST00000471744 MINDY4BA8MYZ0 360 aa18.02■□□□□ 0.48
SNX13-205ENST00000471744 CXCL11O14625 94 aa18.02■□□□□ 0.48
SNX13-205ENST00000471744 CA12O43570 354 aa18.02■□□□□ 0.48
SNX13-205ENST00000471744 HSPD1P10809 573 aaKnown RBP18.02■□□□□ 0.48
SNX13-205ENST00000471744 SHMT1P34896 483 aa18.02■□□□□ 0.48
SNX13-205ENST00000471744 TM4SF4P48230 202 aa18.02■□□□□ 0.48
SNX13-205ENST00000471744 MKRN3Q13064 507 aaKnown RBP18.02■□□□□ 0.48
SNX13-205ENST00000471744 SNAPC2Q13487 334 aa18.02■□□□□ 0.48
SNX13-205ENST00000471744 CCDC17Q96LX7 622 aa18.02■□□□□ 0.48
SNX13-205ENST00000471744 WBP1LQ9NX94 342 aa18.02■□□□□ 0.48
SNX13-205ENST00000471744 KCNH4Q9UQ05 1017 aa18.02■□□□□ 0.48
SNX13-205ENST00000471744 CYP2D7A0A087X1C5 515 aa18.01■□□□□ 0.47
SNX13-205ENST00000471744 IRF6O14896 467 aa18.01■□□□□ 0.47
SNX13-205ENST00000471744 CETPP11597 493 aa18.01■□□□□ 0.47
SNX13-205ENST00000471744 CDK8P49336 464 aa18.01■□□□□ 0.47
SNX13-205ENST00000471744 VPS53Q5VIR6 699 aa18.01■□□□□ 0.47
SNX13-205ENST00000471744 OTUD7BQ6GQQ9 843 aa18.01■□□□□ 0.47
SNX13-205ENST00000471744 ZIC5Q96T25 663 aa18.01■□□□□ 0.47
SNX13-205ENST00000471744 ZBTB21Q9ULJ3 1066 aa18.01■□□□□ 0.47
SNX13-205ENST00000471744 ZHX2Q9Y6X8 837 aa18.01■□□□□ 0.47
SNX13-205ENST00000471744 TESPA1A2RU30 521 aaPredicted RBP18■□□□□ 0.47
SNX13-205ENST00000471744 FOXP2O15409 715 aa18■□□□□ 0.47
SNX13-205ENST00000471744 ALDH1A1P00352 501 aa18■□□□□ 0.47
SNX13-205ENST00000471744 PDE4BQ07343 736 aa18■□□□□ 0.47
SNX13-205ENST00000471744 PPARAQ07869 468 aa18■□□□□ 0.47
SNX13-205ENST00000471744 RRP1BQ14684 758 aaKnown RBP18■□□□□ 0.47
SNX13-205ENST00000471744 ABCB5Q2M3G0 1257 aa18■□□□□ 0.47
SNX13-205ENST00000471744 CASC1Q6TDU7 716 aa18■□□□□ 0.47
SNX13-205ENST00000471744 SKAP1Q86WV1 359 aa18■□□□□ 0.47
SNX13-205ENST00000471744 DYNLL2Q96FJ2 89 aa18■□□□□ 0.47
SNX13-205ENST00000471744 DSCC1Q9BVC3 393 aa18■□□□□ 0.47
SNX13-205ENST00000471744 GDF11O95390 407 aa17.99■□□□□ 0.47
SNX13-205ENST00000471744 GH2P01242 217 aa17.99■□□□□ 0.47
SNX13-205ENST00000471744 MS4A4AQ96JQ5 239 aa17.99■□□□□ 0.47
SNX13-205ENST00000471744 WDR18Q9BV38 432 aa17.99■□□□□ 0.47
SNX13-205ENST00000471744 MKNK2Q9HBH9 465 aa17.99■□□□□ 0.47
SNX13-205ENST00000471744 SAGE1Q9NXZ1 904 aa17.99■□□□□ 0.47
SNX13-205ENST00000471744 AFG3L2Q9Y4W6 797 aa17.99■□□□□ 0.47
SNX13-205ENST00000471744 LAMA4Q16363 1823 aa17.98■□□□□ 0.47
SNX13-205ENST00000471744 CCL15-CCL14A0A0B4J2E2 113 aa17.98■□□□□ 0.47
SNX13-205ENST00000471744 SGSM2O43147 1006 aa17.98■□□□□ 0.47
SNX13-205ENST00000471744 FGAP02671 866 aa17.98■□□□□ 0.47
SNX13-205ENST00000471744 EVX2Q03828 476 aa17.98■□□□□ 0.47
SNX13-205ENST00000471744 CCL15Q16663 113 aa17.98■□□□□ 0.47
SNX13-205ENST00000471744 TMEM179Q6ZVK1 233 aa17.98■□□□□ 0.47
SNX13-205ENST00000471744 SLC44A5Q8NCS7 719 aa17.98■□□□□ 0.47
SNX13-205ENST00000471744 ZNF280CQ8ND82 737 aa17.98■□□□□ 0.47
SNX13-205ENST00000471744 ZCCHC17Q9NP64 241 aaKnown RBP17.98■□□□□ 0.47
SNX13-205ENST00000471744 CTNNA3Q9UI47 895 aa17.98■□□□□ 0.47
SNX13-205ENST00000471744 ANAPC4Q9UJX5 808 aa17.98■□□□□ 0.47
SNX13-205ENST00000471744 HSPA1AP0DMV8 641 aaKnown RBP17.97■□□□□ 0.47
SNX13-205ENST00000471744 HSPA1BP0DMV9 641 aaKnown RBP17.97■□□□□ 0.47
SNX13-205ENST00000471744 FASTKD5Q7L8L6 764 aaKnown RBP17.97■□□□□ 0.47
SNX13-205ENST00000471744 IFNL1Q8IU54 200 aa17.97■□□□□ 0.47
SNX13-205ENST00000471744 A0A0G2JLL6 359 aaPredicted RBP17.96■□□□□ 0.47
SNX13-205ENST00000471744 C19orf81C9J6K1 198 aa17.96■□□□□ 0.47
SNX13-205ENST00000471744 MPHOSPH10O00566 681 aaKnown RBP17.96■□□□□ 0.47
SNX13-205ENST00000471744 CDC45O75419 566 aa17.96■□□□□ 0.47
SNX13-205ENST00000471744 PCP11498 1178 aaKnown RBP17.96■□□□□ 0.47
SNX13-205ENST00000471744 RAB3GAP1Q15042 981 aa17.96■□□□□ 0.47
SNX13-205ENST00000471744 PRRT2Q7Z6L0 340 aaPredicted RBP17.96■□□□□ 0.47
SNX13-205ENST00000471744 ZNF444Q8N0Y2 327 aaPredicted RBP17.96■□□□□ 0.47
SNX13-205ENST00000471744 BRI3BPQ8WY22 251 aa17.96■□□□□ 0.47
SNX13-205ENST00000471744 GREB1LQ9C091 1923 aaPredicted RBP17.96■□□□□ 0.47
SNX13-205ENST00000471744 LOC285556D6RIA3 1793 aa17.95■□□□□ 0.46
SNX13-205ENST00000471744 TRIM75PA6NK02 468 aa17.95■□□□□ 0.46
SNX13-205ENST00000471744 NT5C2P49902 561 aa17.95■□□□□ 0.46
SNX13-205ENST00000471744 JAG1P78504 1218 aa17.95■□□□□ 0.46
SNX13-205ENST00000471744 SPP2Q13103 211 aa17.95■□□□□ 0.46
SNX13-205ENST00000471744 KIAA1211Q6ZU35 1233 aa17.95■□□□□ 0.46
SNX13-205ENST00000471744 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.95■□□□□ 0.46
SNX13-205ENST00000471744 USP17L10C9JJH3 530 aa17.94■□□□□ 0.46
SNX13-205ENST00000471744 SMIM22K7EJ46 135 aa17.94■□□□□ 0.46
SNX13-205ENST00000471744 AKR1B1P15121 316 aa17.94■□□□□ 0.46
SNX13-205ENST00000471744 RASA1P20936 1047 aa17.94■□□□□ 0.46
SNX13-205ENST00000471744 CTCFP49711 727 aaPredicted RBP17.94■□□□□ 0.46
SNX13-205ENST00000471744 BACE1P56817 501 aa17.94■□□□□ 0.46
SNX13-205ENST00000471744 SH3D19Q5HYK7 790 aa17.94■□□□□ 0.46
SNX13-205ENST00000471744 ANKRD23Q86SG2 305 aa17.94■□□□□ 0.46
SNX13-205ENST00000471744 CCDC84Q86UT8 332 aaPredicted RBP17.94■□□□□ 0.46
SNX13-205ENST00000471744 PROCA1Q8NCQ7 364 aaPredicted RBP17.94■□□□□ 0.46
SNX13-205ENST00000471744 ESYT1Q9BSJ8 1104 aa17.94■□□□□ 0.46
SNX13-205ENST00000471744 CFHR5Q9BXR6 569 aa17.94■□□□□ 0.46
SNX13-205ENST00000471744 IL25Q9H293 177 aa17.94■□□□□ 0.46
SNX13-205ENST00000471744 RNF41Q9H4P4 317 aaPredicted RBP17.94■□□□□ 0.46
SNX13-205ENST00000471744 RNF186Q9NXI6 227 aa17.94■□□□□ 0.46
SNX13-205ENST00000471744 IGF2BP3O00425 579 aaKnown RBP eCLIP17.93■□□□□ 0.46
SNX13-205ENST00000471744 ZNF213O14771 459 aa17.93■□□□□ 0.46
SNX13-205ENST00000471744 ORC4O43929 436 aa17.93■□□□□ 0.46
SNX13-205ENST00000471744 TRPA1O75762 1119 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms