RNA–Protein interactions for RNA: ENST00000468284.1

CKAP2-205, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 3

Gene CKAP2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-205ENST00000468284 XP32Q5T750 250 aa12.21□□□□□ -0.45
CKAP2-205ENST00000468284 SIX5Q8N196 739 aa12.21□□□□□ -0.45
CKAP2-205ENST00000468284 TSEN2Q8NCE0 465 aaKnown RBP12.21□□□□□ -0.45
CKAP2-205ENST00000468284 ZNF594Q96JF6 807 aaPredicted RBP12.21□□□□□ -0.45
CKAP2-205ENST00000468284 BRD7Q9NPI1 651 aa12.21□□□□□ -0.45
CKAP2-205ENST00000468284 ANKIB1Q9P2G1 1089 aa12.21□□□□□ -0.45
CKAP2-205ENST00000468284 SULT6B1Q6IMI4 303 aa12.2□□□□□ -0.46
CKAP2-205ENST00000468284 DLK2Q6UY11 383 aa12.2□□□□□ -0.46
CKAP2-205ENST00000468284 TNFRSF25Q93038 417 aa12.2□□□□□ -0.46
CKAP2-205ENST00000468284 CEP63Q96MT8 703 aa12.2□□□□□ -0.46
CKAP2-205ENST00000468284 SETDB2Q96T68 719 aa12.2□□□□□ -0.46
CKAP2-205ENST00000468284 GLIS2Q9BZE0 524 aaPredicted RBP12.2□□□□□ -0.46
CKAP2-205ENST00000468284 RBM19Q9Y4C8 960 aaKnown RBP12.2□□□□□ -0.46
CKAP2-205ENST00000468284 SNED1Q8TER0 1413 aa12.2□□□□□ -0.46
CKAP2-205ENST00000468284 SPDYE3A6NKU9 549 aa12.19□□□□□ -0.46
CKAP2-205ENST00000468284 RNMTO43148 476 aaKnown RBP12.19□□□□□ -0.46
CKAP2-205ENST00000468284 CAMTA2O94983 1202 aa12.19□□□□□ -0.46
CKAP2-205ENST00000468284 ST5P78524 1137 aa12.19□□□□□ -0.46
CKAP2-205ENST00000468284 ZNF408Q9H9D4 720 aa12.19□□□□□ -0.46
CKAP2-205ENST00000468284 BCORQ6W2J9 1755 aa12.18□□□□□ -0.46
CKAP2-205ENST00000468284 SFI1A8K8P3 1242 aa12.18□□□□□ -0.46
CKAP2-205ENST00000468284 PPP1R12BO60237 982 aaPredicted RBP12.18□□□□□ -0.46
CKAP2-205ENST00000468284 LMOD1P29536 600 aaPredicted RBP12.18□□□□□ -0.46
CKAP2-205ENST00000468284 AKAP4Q5JQC9 854 aa12.18□□□□□ -0.46
CKAP2-205ENST00000468284 RAB44Q7Z6P3 723 aaPredicted RBP12.18□□□□□ -0.46
CKAP2-205ENST00000468284 PDE4DIPQ5VU43 2346 aa12.18□□□□□ -0.46
CKAP2-205ENST00000468284 MRC1P22897 1456 aa12.18□□□□□ -0.46
CKAP2-205ENST00000468284 UBR2Q8IWV8 1755 aa12.18□□□□□ -0.46
CKAP2-205ENST00000468284 A0A087WZG4 1122 aa12.17□□□□□ -0.46
CKAP2-205ENST00000468284 M0R082 166 aa12.17□□□□□ -0.46
CKAP2-205ENST00000468284 A1BGP04217 495 aa12.17□□□□□ -0.46
CKAP2-205ENST00000468284 NPR1P16066 1061 aa12.17□□□□□ -0.46
CKAP2-205ENST00000468284 PIP4K2AP48426 406 aaPredicted RBP12.17□□□□□ -0.46
CKAP2-205ENST00000468284 HABP4Q5JVS0 413 aaKnown RBP12.17□□□□□ -0.46
CKAP2-205ENST00000468284 USP50Q70EL3 339 aaPredicted RBP12.17□□□□□ -0.46
CKAP2-205ENST00000468284 RTKN2Q8IZC4 609 aa12.17□□□□□ -0.46
CKAP2-205ENST00000468284 ZNF280CQ8ND82 737 aa12.17□□□□□ -0.46
CKAP2-205ENST00000468284 ZNF417Q8TAU3 575 aa12.17□□□□□ -0.46
CKAP2-205ENST00000468284 SUSD3Q96L08 255 aa12.17□□□□□ -0.46
CKAP2-205ENST00000468284 ZNF587Q96SQ5 575 aaPredicted RBP12.17□□□□□ -0.46
CKAP2-205ENST00000468284 EIF6P56537 245 aaKnown RBP12.16□□□□□ -0.46
CKAP2-205ENST00000468284 TYRO3Q06418 890 aa12.16□□□□□ -0.46
CKAP2-205ENST00000468284 PRRT3Q5FWE3 981 aa12.16□□□□□ -0.46
CKAP2-205ENST00000468284 JDP2Q8WYK2 163 aa12.16□□□□□ -0.46
CKAP2-205ENST00000468284 HHIPL1Q96JK4 782 aa12.16□□□□□ -0.46
CKAP2-205ENST00000468284 KCNH4Q9UQ05 1017 aa12.16□□□□□ -0.46
CKAP2-205ENST00000468284 KLRG2A4D1S0 409 aaPredicted RBP12.15□□□□□ -0.46
CKAP2-205ENST00000468284 FAM177BA6PVY3 158 aa12.15□□□□□ -0.46
CKAP2-205ENST00000468284 FAM155AB1AL88 458 aaPredicted RBP12.15□□□□□ -0.46
CKAP2-205ENST00000468284 DKK1O94907 266 aa12.15□□□□□ -0.46
CKAP2-205ENST00000468284 STARD3NLO95772 234 aa12.15□□□□□ -0.46
CKAP2-205ENST00000468284 ADH7P40394 386 aa12.15□□□□□ -0.46
CKAP2-205ENST00000468284 GATA4P43694 442 aa12.15□□□□□ -0.46
CKAP2-205ENST00000468284 DOC2BQ14184 412 aa12.15□□□□□ -0.46
CKAP2-205ENST00000468284 ZNF496Q96IT1 587 aaPredicted RBP12.15□□□□□ -0.46
CKAP2-205ENST00000468284 STARD13Q9Y3M8 1113 aa12.15□□□□□ -0.46
CKAP2-205ENST00000468284 TRPA1O75762 1119 aa12.14□□□□□ -0.47
CKAP2-205ENST00000468284 ALBP02768 609 aa12.14□□□□□ -0.47
CKAP2-205ENST00000468284 IL6STP40189 918 aaPredicted RBP12.14□□□□□ -0.47
CKAP2-205ENST00000468284 NBPF5PQ86XG9 351 aaPredicted RBP12.14□□□□□ -0.47
CKAP2-205ENST00000468284 PRDM6Q9NQX0 595 aa12.14□□□□□ -0.47
CKAP2-205ENST00000468284 RNF186Q9NXI6 227 aa12.14□□□□□ -0.47
CKAP2-205ENST00000468284 RASA1P20936 1047 aa12.13□□□□□ -0.47
CKAP2-205ENST00000468284 NOGQ13253 232 aa12.13□□□□□ -0.47
CKAP2-205ENST00000468284 ALDH16A1Q8IZ83 802 aa12.13□□□□□ -0.47
CKAP2-205ENST00000468284 MICALL1Q8N3F8 863 aa12.13□□□□□ -0.47
CKAP2-205ENST00000468284 GLMNQ92990 594 aa12.13□□□□□ -0.47
CKAP2-205ENST00000468284 PSMD1Q99460 953 aa12.13□□□□□ -0.47
CKAP2-205ENST00000468284 GPRC5DQ9NZD1 345 aa12.13□□□□□ -0.47
CKAP2-205ENST00000468284 SHTN1A0MZ66 631 aa12.12□□□□□ -0.47
CKAP2-205ENST00000468284 IL13P35225 146 aa12.12□□□□□ -0.47
CKAP2-205ENST00000468284 HUNKP57058 714 aa12.12□□□□□ -0.47
CKAP2-205ENST00000468284 KIF23Q02241 960 aaPredicted RBP12.12□□□□□ -0.47
CKAP2-205ENST00000468284 COL9A3Q14050 684 aaPredicted RBP12.12□□□□□ -0.47
CKAP2-205ENST00000468284 MTHFSDQ2M296 383 aaKnown RBP12.12□□□□□ -0.47
CKAP2-205ENST00000468284 C8orf86Q6ZUL3 223 aa12.12□□□□□ -0.47
CKAP2-205ENST00000468284 CLUAP1Q96AJ1 413 aa12.12□□□□□ -0.47
CKAP2-205ENST00000468284 ADARB2Q9NS39 739 aaKnown RBP12.12□□□□□ -0.47
CKAP2-205ENST00000468284 HEG1Q9ULI3 1381 aa12.12□□□□□ -0.47
CKAP2-205ENST00000468284 TCERG1O14776 1098 aaKnown RBP12.11□□□□□ -0.47
CKAP2-205ENST00000468284 HMOX1P09601 288 aa12.11□□□□□ -0.47
CKAP2-205ENST00000468284 FXR1P51114 621 aaKnown RBP eCLIP12.11□□□□□ -0.47
CKAP2-205ENST00000468284 CTU1Q7Z7A3 348 aaKnown RBP12.11□□□□□ -0.47
CKAP2-205ENST00000468284 STAG2Q8N3U4 1231 aa12.11□□□□□ -0.47
CKAP2-205ENST00000468284 SCG3Q8WXD2 468 aaKnown RBP12.11□□□□□ -0.47
CKAP2-205ENST00000468284 C2orf49Q9BVC5 232 aaPredicted RBP12.11□□□□□ -0.47
CKAP2-205ENST00000468284 TFIP11Q9UBB9 837 aaKnown RBP12.11□□□□□ -0.47
CKAP2-205ENST00000468284 PGAP2Q9UHJ9 254 aa12.11□□□□□ -0.47
CKAP2-205ENST00000468284 MAFBQ9Y5Q3 323 aaPredicted RBP12.11□□□□□ -0.47
CKAP2-205ENST00000468284 PRAMEF22A3QJZ6 481 aa12.1□□□□□ -0.47
CKAP2-205ENST00000468284 FAM229AH3BQW9 127 aa12.1□□□□□ -0.47
CKAP2-205ENST00000468284 KCNQ3O43525 872 aa12.1□□□□□ -0.47
CKAP2-205ENST00000468284 SEC13P55735 322 aa12.1□□□□□ -0.47
CKAP2-205ENST00000468284 HIF1AQ16665 826 aa12.1□□□□□ -0.47
CKAP2-205ENST00000468284 USP48Q86UV5 1035 aa12.1□□□□□ -0.47
CKAP2-205ENST00000468284 TTC5Q8N0Z6 440 aa12.1□□□□□ -0.47
CKAP2-205ENST00000468284 GAS2L2Q8NHY3 880 aa12.1□□□□□ -0.47
CKAP2-205ENST00000468284 TRPM4Q8TD43 1214 aa12.1□□□□□ -0.47
CKAP2-205ENST00000468284 BHMTQ93088 406 aa12.1□□□□□ -0.47
CKAP2-205ENST00000468284 GCC1Q96CN9 775 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms