RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 RPTORQ8N122 1335 aa24.23■■□□□ 1.47
VARS-221ENST00000463184 SURF6O75683 361 aaKnown RBP24.22■■□□□ 1.47
VARS-221ENST00000463184 ADGRA1Q86SQ6 560 aa24.22■■□□□ 1.47
VARS-221ENST00000463184 DNAJC18Q9H819 358 aa24.22■■□□□ 1.47
VARS-221ENST00000463184 HMX1Q9NP08 348 aaPredicted RBP24.22■■□□□ 1.47
VARS-221ENST00000463184 SZT2Q5T011 3432 aa24.21■■□□□ 1.47
VARS-221ENST00000463184 A0A1W2PPC1 479 aa24.21■■□□□ 1.47
VARS-221ENST00000463184 USP17L10C9JJH3 530 aa24.21■■□□□ 1.47
VARS-221ENST00000463184 P2RX7Q99572 595 aaKnown RBP24.21■■□□□ 1.47
VARS-221ENST00000463184 PALD1Q9ULE6 856 aa24.21■■□□□ 1.47
VARS-221ENST00000463184 HLA-DOAP06340 250 aa24.2■■□□□ 1.46
VARS-221ENST00000463184 GPRC5AQ8NFJ5 357 aa24.2■■□□□ 1.46
VARS-221ENST00000463184 ZAP70P43403 619 aa24.19■■□□□ 1.46
VARS-221ENST00000463184 JAG1P78504 1218 aa24.19■■□□□ 1.46
VARS-221ENST00000463184 NOP58Q9Y2X3 529 aaKnown RBP24.19■■□□□ 1.46
VARS-221ENST00000463184 SIPA1L1O43166 1804 aa24.19■■□□□ 1.46
VARS-221ENST00000463184 MAST2Q6P0Q8 1798 aa24.19■■□□□ 1.46
VARS-221ENST00000463184 HERVK_113P62684 666 aa24.18■■□□□ 1.46
VARS-221ENST00000463184 DIS3LQ8TF46 1054 aaKnown RBP24.18■■□□□ 1.46
VARS-221ENST00000463184 GTF3C2Q8WUA4 911 aaPredicted RBP24.18■■□□□ 1.46
VARS-221ENST00000463184 NUDT12Q9BQG2 462 aa24.18■■□□□ 1.46
VARS-221ENST00000463184 PIH1D3Q9NQM4 214 aaKnown RBP24.18■■□□□ 1.46
VARS-221ENST00000463184 ZBTB21Q9ULJ3 1066 aa24.18■■□□□ 1.46
VARS-221ENST00000463184 GDF11O95390 407 aa24.17■■□□□ 1.46
VARS-221ENST00000463184 XRCC5P13010 732 aaKnown RBP24.17■■□□□ 1.46
VARS-221ENST00000463184 CYP2B6P20813 491 aa24.17■■□□□ 1.46
VARS-221ENST00000463184 TRIM32Q13049 653 aa24.17■■□□□ 1.46
VARS-221ENST00000463184 CERS3Q8IU89 383 aa24.17■■□□□ 1.46
VARS-221ENST00000463184 SOCS4Q8WXH5 440 aa24.17■■□□□ 1.46
VARS-221ENST00000463184 TRIB2Q92519 343 aa24.17■■□□□ 1.46
VARS-221ENST00000463184 TXNRD2Q9NNW7 524 aa24.17■■□□□ 1.46
VARS-221ENST00000463184 DBNLQ9UJU6 430 aaKnown RBP24.17■■□□□ 1.46
VARS-221ENST00000463184 CYP7A1P22680 504 aa24.16■■□□□ 1.46
VARS-221ENST00000463184 MAPK4P31152 587 aa24.16■■□□□ 1.46
VARS-221ENST00000463184 TRMT44Q8IYL2 757 aaKnown RBP24.16■■□□□ 1.46
VARS-221ENST00000463184 NBPF3Q9H094 633 aa24.16■■□□□ 1.46
VARS-221ENST00000463184 RBPJLQ9UBG7 517 aa24.16■■□□□ 1.46
VARS-221ENST00000463184 SAP30BPQ9UHR5 308 aaKnown RBP24.16■■□□□ 1.46
VARS-221ENST00000463184 FOCADQ5VW36 1801 aa24.15■■□□□ 1.46
VARS-221ENST00000463184 DYNLL1P63167 89 aaKnown RBP24.15■■□□□ 1.46
VARS-221ENST00000463184 SHROOM1Q2M3G4 852 aaPredicted RBP24.15■■□□□ 1.46
VARS-221ENST00000463184 MAP3K21Q5TCX8 1036 aa24.15■■□□□ 1.46
VARS-221ENST00000463184 USP17L2Q6R6M4 530 aa24.15■■□□□ 1.46
VARS-221ENST00000463184 FTSJ3Q8IY81 847 aaKnown RBP24.15■■□□□ 1.46
VARS-221ENST00000463184 CCDC8Q9H0W5 538 aaPredicted RBP24.15■■□□□ 1.46
VARS-221ENST00000463184 C1orf115Q9H7X2 142 aa24.15■■□□□ 1.46
VARS-221ENST00000463184 STAP2Q9UGK3 403 aa24.15■■□□□ 1.46
VARS-221ENST00000463184 OGDHLQ9ULD0 1010 aa24.15■■□□□ 1.46
VARS-221ENST00000463184 ERVK-9P63128 1117 aa24.14■■□□□ 1.45
VARS-221ENST00000463184 ERVK-24P63145 666 aa24.14■■□□□ 1.45
VARS-221ENST00000463184 PDE3AQ14432 1141 aa24.14■■□□□ 1.45
VARS-221ENST00000463184 CCAR1Q8IX12 1150 aaKnown RBP24.14■■□□□ 1.45
VARS-221ENST00000463184 CDK5RAP2Q96SN8 1893 aa24.14■■□□□ 1.45
VARS-221ENST00000463184 EMILIN3Q9NT22 766 aa24.14■■□□□ 1.45
VARS-221ENST00000463184 PLXNB2O15031 1838 aa24.13■■□□□ 1.45
VARS-221ENST00000463184 PEX10O60683 326 aa24.13■■□□□ 1.45
VARS-221ENST00000463184 IDH1O75874 414 aaKnown RBP24.13■■□□□ 1.45
VARS-221ENST00000463184 PRKAR2AP13861 404 aaKnown RBP24.13■■□□□ 1.45
VARS-221ENST00000463184 USP5P45974 858 aa24.13■■□□□ 1.45
VARS-221ENST00000463184 MNX1P50219 401 aaPredicted RBP24.13■■□□□ 1.45
VARS-221ENST00000463184 Q3C1V9 767 aa24.13■■□□□ 1.45
VARS-221ENST00000463184 TMED8Q6PL24 325 aaPredicted RBP24.13■■□□□ 1.45
VARS-221ENST00000463184 EAF2Q96CJ1 260 aaPredicted RBP24.13■■□□□ 1.45
VARS-221ENST00000463184 C11orf49Q9H6J7 331 aa24.13■■□□□ 1.45
VARS-221ENST00000463184 TLR7Q9NYK1 1049 aaKnown RBP24.13■■□□□ 1.45
VARS-221ENST00000463184 ZBED9Q6R2W3 1325 aa24.12■■□□□ 1.45
VARS-221ENST00000463184 GH2P01242 217 aa24.12■■□□□ 1.45
VARS-221ENST00000463184 BMP8BP34820 402 aa24.12■■□□□ 1.45
VARS-221ENST00000463184 TATDN1Q6P1N9 297 aa24.12■■□□□ 1.45
VARS-221ENST00000463184 ITPRIPQ8IWB1 547 aa24.12■■□□□ 1.45
VARS-221ENST00000463184 MYO5AQ9Y4I1 1855 aaKnown RBP24.12■■□□□ 1.45
VARS-221ENST00000463184 GPR142Q7Z601 462 aa24.11■■□□□ 1.45
VARS-221ENST00000463184 C7orf61Q8IZ16 206 aa24.11■■□□□ 1.45
VARS-221ENST00000463184 MAGEB6Q8N7X4 407 aa24.11■■□□□ 1.45
VARS-221ENST00000463184 MIGA1Q8NAN2 632 aa24.11■■□□□ 1.45
VARS-221ENST00000463184 USP6NLQ92738 828 aa24.11■■□□□ 1.45
VARS-221ENST00000463184 C12orf42Q96LP6 360 aa24.11■■□□□ 1.45
VARS-221ENST00000463184 GDF15Q99988 308 aa24.11■■□□□ 1.45
VARS-221ENST00000463184 EHD4Q9H223 541 aa24.11■■□□□ 1.45
VARS-221ENST00000463184 SERPINB13Q9UIV8 391 aa24.11■■□□□ 1.45
VARS-221ENST00000463184 ALPK3Q96L96 1907 aa24.1■■□□□ 1.45
VARS-221ENST00000463184 ZKSCAN1P17029 563 aaPredicted RBP24.1■■□□□ 1.45
VARS-221ENST00000463184 RGS2P41220 211 aa24.1■■□□□ 1.45
VARS-221ENST00000463184 MAP3K12Q12852 859 aa24.1■■□□□ 1.45
VARS-221ENST00000463184 MORN1Q5T089 497 aa24.1■■□□□ 1.45
VARS-221ENST00000463184 PLEKHH3Q7Z736 793 aa24.1■■□□□ 1.45
VARS-221ENST00000463184 PAGR1Q9BTK6 254 aa24.1■■□□□ 1.45
VARS-221ENST00000463184 PORCNQ9H237 461 aa24.1■■□□□ 1.45
VARS-221ENST00000463184 USP17L15C9J2P7 530 aa24.09■■□□□ 1.45
VARS-221ENST00000463184 USP17L13C9JLJ4 530 aa24.09■■□□□ 1.45
VARS-221ENST00000463184 USP17L11C9JVI0 530 aa24.09■■□□□ 1.45
VARS-221ENST00000463184 USP17L18D6R9N7 530 aa24.09■■□□□ 1.45
VARS-221ENST00000463184 USP17L22D6RA61 530 aa24.09■■□□□ 1.45
VARS-221ENST00000463184 USP17L17D6RBQ6 530 aa24.09■■□□□ 1.45
VARS-221ENST00000463184 USP17L19D6RCP7 530 aa24.09■■□□□ 1.45
VARS-221ENST00000463184 USP17L20D6RJB6 530 aa24.09■■□□□ 1.45
VARS-221ENST00000463184 USP14P54578 494 aa24.09■■□□□ 1.45
VARS-221ENST00000463184 CACNB2Q08289 660 aaPredicted RBP24.09■■□□□ 1.45
VARS-221ENST00000463184 USP17L24Q0WX57 530 aa24.09■■□□□ 1.45
VARS-221ENST00000463184 TTC6Q86TZ1 520 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms