RNA–Protein interactions for RNA: ENST00000458294.5

PBRM1-218, Transcript of polybromo 1, humanhuman

TSL 3

Gene PBRM1, Length 476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-218ENST00000458294 C19orf81C9J6K1 198 aa32.3■■■□□ 2.76
PBRM1-218ENST00000458294 ATP8B2P98198 1209 aa32.3■■■□□ 2.76
PBRM1-218ENST00000458294 NECAB2Q7Z6G3 386 aa32.3■■■□□ 2.76
PBRM1-218ENST00000458294 ADGRA1Q86SQ6 560 aa32.3■■■□□ 2.76
PBRM1-218ENST00000458294 CRACR2BQ8N4Y2 399 aaPredicted RBP32.3■■■□□ 2.76
PBRM1-218ENST00000458294 RPTORQ8N122 1335 aa32.29■■■□□ 2.76
PBRM1-218ENST00000458294 PLXNB2O15031 1838 aa32.29■■■□□ 2.76
PBRM1-218ENST00000458294 MYO5AQ9Y4I1 1855 aaKnown RBP32.29■■■□□ 2.76
PBRM1-218ENST00000458294 SURF6O75683 361 aaKnown RBP32.28■■■□□ 2.76
PBRM1-218ENST00000458294 HMX1Q9NP08 348 aaPredicted RBP32.28■■■□□ 2.76
PBRM1-218ENST00000458294 USP17L10C9JJH3 530 aa32.27■■■□□ 2.76
PBRM1-218ENST00000458294 JAG1P78504 1218 aa32.27■■■□□ 2.76
PBRM1-218ENST00000458294 PALD1Q9ULE6 856 aa32.27■■■□□ 2.76
PBRM1-218ENST00000458294 ALPK3Q96L96 1907 aa32.27■■■□□ 2.76
PBRM1-218ENST00000458294 HLA-DOAP06340 250 aa32.26■■■□□ 2.75
PBRM1-218ENST00000458294 ZAP70P43403 619 aa32.26■■■□□ 2.75
PBRM1-218ENST00000458294 HERVK_113P62684 666 aa32.26■■■□□ 2.75
PBRM1-218ENST00000458294 P2RX7Q99572 595 aaKnown RBP32.26■■■□□ 2.75
PBRM1-218ENST00000458294 ZBTB21Q9ULJ3 1066 aa32.26■■■□□ 2.75
PBRM1-218ENST00000458294 GDF11O95390 407 aa32.25■■■□□ 2.75
PBRM1-218ENST00000458294 GPRC5AQ8NFJ5 357 aa32.25■■■□□ 2.75
PBRM1-218ENST00000458294 DIS3LQ8TF46 1054 aaKnown RBP32.25■■■□□ 2.75
PBRM1-218ENST00000458294 SOCS4Q8WXH5 440 aa32.25■■■□□ 2.75
PBRM1-218ENST00000458294 NOP58Q9Y2X3 529 aaKnown RBP32.25■■■□□ 2.75
PBRM1-218ENST00000458294 TRIM32Q13049 653 aa32.24■■■□□ 2.75
PBRM1-218ENST00000458294 TRIB2Q92519 343 aa32.24■■■□□ 2.75
PBRM1-218ENST00000458294 PIH1D3Q9NQM4 214 aaKnown RBP32.24■■■□□ 2.75
PBRM1-218ENST00000458294 CERS3Q8IU89 383 aa32.23■■■□□ 2.75
PBRM1-218ENST00000458294 GTF3C2Q8WUA4 911 aaPredicted RBP32.23■■■□□ 2.75
PBRM1-218ENST00000458294 NUDT12Q9BQG2 462 aa32.23■■■□□ 2.75
PBRM1-218ENST00000458294 TXNRD2Q9NNW7 524 aa32.23■■■□□ 2.75
PBRM1-218ENST00000458294 DBNLQ9UJU6 430 aaKnown RBP32.23■■■□□ 2.75
PBRM1-218ENST00000458294 XRCC5P13010 732 aaKnown RBP32.22■■■□□ 2.75
PBRM1-218ENST00000458294 NBPF3Q9H094 633 aa32.22■■■□□ 2.75
PBRM1-218ENST00000458294 SAP30BPQ9UHR5 308 aaKnown RBP32.22■■■□□ 2.75
PBRM1-218ENST00000458294 CYP2B6P20813 491 aa32.21■■■□□ 2.75
PBRM1-218ENST00000458294 CYP7A1P22680 504 aa32.21■■■□□ 2.75
PBRM1-218ENST00000458294 MAPK4P31152 587 aa32.21■■■□□ 2.75
PBRM1-218ENST00000458294 DYNLL1P63167 89 aaKnown RBP32.21■■■□□ 2.75
PBRM1-218ENST00000458294 SHROOM1Q2M3G4 852 aaPredicted RBP32.21■■■□□ 2.75
PBRM1-218ENST00000458294 MAP3K21Q5TCX8 1036 aa32.21■■■□□ 2.75
PBRM1-218ENST00000458294 C1orf115Q9H7X2 142 aa32.21■■■□□ 2.75
PBRM1-218ENST00000458294 DDX60LQ5H9U9 1706 aaKnown RBP32.2■■■□□ 2.75
PBRM1-218ENST00000458294 MYH1P12882 1939 aa32.2■■■□□ 2.75
PBRM1-218ENST00000458294 FTSJ3Q8IY81 847 aaKnown RBP32.2■■■□□ 2.75
PBRM1-218ENST00000458294 TRMT44Q8IYL2 757 aaKnown RBP32.2■■■□□ 2.75
PBRM1-218ENST00000458294 RBPJLQ9UBG7 517 aa32.2■■■□□ 2.75
PBRM1-218ENST00000458294 OGDHLQ9ULD0 1010 aa32.2■■■□□ 2.75
PBRM1-218ENST00000458294 ERVK-9P63128 1117 aa32.19■■■□□ 2.74
PBRM1-218ENST00000458294 ERVK-24P63145 666 aa32.19■■■□□ 2.74
PBRM1-218ENST00000458294 PDE3AQ14432 1141 aa32.19■■■□□ 2.74
PBRM1-218ENST00000458294 USP17L2Q6R6M4 530 aa32.19■■■□□ 2.74
PBRM1-218ENST00000458294 TLR7Q9NYK1 1049 aaKnown RBP32.19■■■□□ 2.74
PBRM1-218ENST00000458294 STAP2Q9UGK3 403 aa32.19■■■□□ 2.74
PBRM1-218ENST00000458294 IDH1O75874 414 aaKnown RBP32.18■■■□□ 2.74
PBRM1-218ENST00000458294 MNX1P50219 401 aaPredicted RBP32.18■■■□□ 2.74
PBRM1-218ENST00000458294 TMED8Q6PL24 325 aaPredicted RBP32.18■■■□□ 2.74
PBRM1-218ENST00000458294 CCDC8Q9H0W5 538 aaPredicted RBP32.18■■■□□ 2.74
PBRM1-218ENST00000458294 EMILIN3Q9NT22 766 aa32.18■■■□□ 2.74
PBRM1-218ENST00000458294 PEX10O60683 326 aa32.17■■■□□ 2.74
PBRM1-218ENST00000458294 PRKAR2AP13861 404 aaKnown RBP32.17■■■□□ 2.74
PBRM1-218ENST00000458294 TATDN1Q6P1N9 297 aa32.17■■■□□ 2.74
PBRM1-218ENST00000458294 CCAR1Q8IX12 1150 aaKnown RBP32.17■■■□□ 2.74
PBRM1-218ENST00000458294 C7orf61Q8IZ16 206 aa32.17■■■□□ 2.74
PBRM1-218ENST00000458294 EAF2Q96CJ1 260 aaPredicted RBP32.17■■■□□ 2.74
PBRM1-218ENST00000458294 C11orf49Q9H6J7 331 aa32.17■■■□□ 2.74
PBRM1-218ENST00000458294 GH2P01242 217 aa32.16■■■□□ 2.74
PBRM1-218ENST00000458294 USP5P45974 858 aa32.16■■■□□ 2.74
PBRM1-218ENST00000458294 ITPRIPQ8IWB1 547 aa32.16■■■□□ 2.74
PBRM1-218ENST00000458294 C12orf42Q96LP6 360 aa32.16■■■□□ 2.74
PBRM1-218ENST00000458294 EHD4Q9H223 541 aa32.16■■■□□ 2.74
PBRM1-218ENST00000458294 ZKSCAN1P17029 563 aaPredicted RBP32.15■■■□□ 2.74
PBRM1-218ENST00000458294 BMP8BP34820 402 aa32.15■■■□□ 2.74
PBRM1-218ENST00000458294 Q3C1V9 767 aa32.15■■■□□ 2.74
PBRM1-218ENST00000458294 MIGA1Q8NAN2 632 aa32.15■■■□□ 2.74
PBRM1-218ENST00000458294 USP6NLQ92738 828 aa32.15■■■□□ 2.74
PBRM1-218ENST00000458294 GDF15Q99988 308 aa32.15■■■□□ 2.74
PBRM1-218ENST00000458294 SERPINB13Q9UIV8 391 aa32.15■■■□□ 2.74
PBRM1-218ENST00000458294 RGS2P41220 211 aa32.14■■■□□ 2.74
PBRM1-218ENST00000458294 GPR142Q7Z601 462 aa32.14■■■□□ 2.74
PBRM1-218ENST00000458294 MAGEB6Q8N7X4 407 aa32.14■■■□□ 2.74
PBRM1-218ENST00000458294 PAGR1Q9BTK6 254 aa32.14■■■□□ 2.74
PBRM1-218ENST00000458294 PORCNQ9H237 461 aa32.14■■■□□ 2.74
PBRM1-218ENST00000458294 PLEKHH3Q7Z736 793 aa32.13■■■□□ 2.73
PBRM1-218ENST00000458294 FEZ1Q99689 392 aa32.13■■■□□ 2.73
PBRM1-218ENST00000458294 MAP3K12Q12852 859 aa32.12■■■□□ 2.73
PBRM1-218ENST00000458294 MORN1Q5T089 497 aa32.12■■■□□ 2.73
PBRM1-218ENST00000458294 TTC6Q86TZ1 520 aa32.12■■■□□ 2.73
PBRM1-218ENST00000458294 APBA2Q99767 749 aa32.12■■■□□ 2.73
PBRM1-218ENST00000458294 LAMA3Q16787 3333 aa32.11■■■□□ 2.73
PBRM1-218ENST00000458294 USP17L15C9J2P7 530 aa32.11■■■□□ 2.73
PBRM1-218ENST00000458294 USP17L13C9JLJ4 530 aa32.11■■■□□ 2.73
PBRM1-218ENST00000458294 USP17L11C9JVI0 530 aa32.11■■■□□ 2.73
PBRM1-218ENST00000458294 USP17L18D6R9N7 530 aa32.11■■■□□ 2.73
PBRM1-218ENST00000458294 USP17L22D6RA61 530 aa32.11■■■□□ 2.73
PBRM1-218ENST00000458294 USP17L17D6RBQ6 530 aa32.11■■■□□ 2.73
PBRM1-218ENST00000458294 USP17L19D6RCP7 530 aa32.11■■■□□ 2.73
PBRM1-218ENST00000458294 USP17L20D6RJB6 530 aa32.11■■■□□ 2.73
PBRM1-218ENST00000458294 SOX1O00570 391 aaPredicted RBP32.11■■■□□ 2.73
PBRM1-218ENST00000458294 USP14P54578 494 aa32.11■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms