RNA–Protein interactions for RNA: ENST00000454043.1

LINC00299-204, long intergenic non-protein coding RNA 299, humanhuman

TSL 4

Gene LINC00299, Length 591 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-204ENST00000454043 SETDB2Q96T68 719 aa9.34□□□□□ -0.91
LINC00299-204ENST00000454043 ENAMQ9NRM1 1142 aa9.34□□□□□ -0.91
LINC00299-204ENST00000454043 LRRC4BQ9NT99 713 aa9.34□□□□□ -0.91
LINC00299-204ENST00000454043 STAP2Q9UGK3 403 aa9.34□□□□□ -0.91
LINC00299-204ENST00000454043 C2CD2LO14523 706 aa9.33□□□□□ -0.92
LINC00299-204ENST00000454043 CIAO1O76071 339 aa9.33□□□□□ -0.92
LINC00299-204ENST00000454043 CSF1RP07333 972 aa9.33□□□□□ -0.92
LINC00299-204ENST00000454043 RASA1P20936 1047 aa9.33□□□□□ -0.92
LINC00299-204ENST00000454043 ANP32AP39687 249 aaKnown RBP9.33□□□□□ -0.92
LINC00299-204ENST00000454043 IL15P40933 162 aaPredicted RBP9.33□□□□□ -0.92
LINC00299-204ENST00000454043 PDE1AP54750 535 aa9.33□□□□□ -0.92
LINC00299-204ENST00000454043 C8orf34Q49A92 452 aa9.33□□□□□ -0.92
LINC00299-204ENST00000454043 TBCELQ5QJ74 424 aa9.33□□□□□ -0.92
LINC00299-204ENST00000454043 TTC22Q5TAA0 569 aa9.33□□□□□ -0.92
LINC00299-204ENST00000454043 PTF1AQ7RTS3 328 aa9.33□□□□□ -0.92
LINC00299-204ENST00000454043 FLAD1Q8NFF5 587 aa9.33□□□□□ -0.92
LINC00299-204ENST00000454043 BCL11AQ9H165 835 aa9.33□□□□□ -0.92
LINC00299-204ENST00000454043 TTC41PQ6P2S7 1318 aa9.32□□□□□ -0.92
LINC00299-204ENST00000454043 ANKRD18BA2A2Z9 1011 aa9.32□□□□□ -0.92
LINC00299-204ENST00000454043 EML1O00423 815 aa9.32□□□□□ -0.92
LINC00299-204ENST00000454043 CDC45O75419 566 aa9.32□□□□□ -0.92
LINC00299-204ENST00000454043 APBA3O96018 575 aa9.32□□□□□ -0.92
LINC00299-204ENST00000454043 FGFR3P22607 806 aa9.32□□□□□ -0.92
LINC00299-204ENST00000454043 SSFA2P28290 1259 aa9.32□□□□□ -0.92
LINC00299-204ENST00000454043 MARSP56192 900 aaKnown RBP9.32□□□□□ -0.92
LINC00299-204ENST00000454043 PTPN12Q05209 780 aaKnown RBP9.32□□□□□ -0.92
LINC00299-204ENST00000454043 CCDC152Q4G0S7 254 aa9.32□□□□□ -0.92
LINC00299-204ENST00000454043 EPHA10Q5JZY3 1008 aa9.32□□□□□ -0.92
LINC00299-204ENST00000454043 TPTE2Q6XPS3 522 aa9.32□□□□□ -0.92
LINC00299-204ENST00000454043 C16orf71Q8IYS4 520 aaPredicted RBP9.32□□□□□ -0.92
LINC00299-204ENST00000454043 JARID2Q92833 1246 aaPredicted RBP9.32□□□□□ -0.92
LINC00299-204ENST00000454043 OXCT2Q9BYC2 517 aaPredicted RBP9.32□□□□□ -0.92
LINC00299-204ENST00000454043 HCN2Q9UL51 889 aa9.32□□□□□ -0.92
LINC00299-204ENST00000454043 AKAP2Q9Y2D5 859 aa9.32□□□□□ -0.92
LINC00299-204ENST00000454043 NUP188Q5SRE5 1749 aa9.31□□□□□ -0.92
LINC00299-204ENST00000454043 BTAF1O14981 1849 aa9.31□□□□□ -0.92
LINC00299-204ENST00000454043 SFI1A8K8P3 1242 aa9.31□□□□□ -0.92
LINC00299-204ENST00000454043 EYA2O00167 538 aa9.31□□□□□ -0.92
LINC00299-204ENST00000454043 ATXN7O15265 892 aaPredicted RBP9.31□□□□□ -0.92
LINC00299-204ENST00000454043 OIP5O43482 229 aa9.31□□□□□ -0.92
LINC00299-204ENST00000454043 GLRX3O76003 335 aaKnown RBP9.31□□□□□ -0.92
LINC00299-204ENST00000454043 RFX5P48382 616 aaPredicted RBP9.31□□□□□ -0.92
LINC00299-204ENST00000454043 CTSWP56202 376 aa9.31□□□□□ -0.92
LINC00299-204ENST00000454043 TNP2Q05952 138 aa9.31□□□□□ -0.92
LINC00299-204ENST00000454043 TXNRD1Q16881 649 aa9.31□□□□□ -0.92
LINC00299-204ENST00000454043 SUSD4Q5VX71 490 aa9.31□□□□□ -0.92
LINC00299-204ENST00000454043 POTEAQ6S8J7 498 aa9.31□□□□□ -0.92
LINC00299-204ENST00000454043 ZNF594Q96JF6 807 aaPredicted RBP9.31□□□□□ -0.92
LINC00299-204ENST00000454043 SIL1Q9H173 461 aa9.31□□□□□ -0.92
LINC00299-204ENST00000454043 IL1RAPL2Q9NP60 686 aa9.31□□□□□ -0.92
LINC00299-204ENST00000454043 GPR108Q9NPR9 543 aa9.31□□□□□ -0.92
LINC00299-204ENST00000454043 ECHDC1Q9NTX5 307 aa9.31□□□□□ -0.92
LINC00299-204ENST00000454043 PA2G4Q9UQ80 394 aaKnown RBP9.31□□□□□ -0.92
LINC00299-204ENST00000454043 RREB1Q92766 1687 aa9.31□□□□□ -0.92
LINC00299-204ENST00000454043 SERTM1A2A2V5 107 aa9.3□□□□□ -0.92
LINC00299-204ENST00000454043 NPHP1O15259 732 aa9.3□□□□□ -0.92
LINC00299-204ENST00000454043 LMOD1P29536 600 aaPredicted RBP9.3□□□□□ -0.92
LINC00299-204ENST00000454043 KCNQ4P56696 695 aa9.3□□□□□ -0.92
LINC00299-204ENST00000454043 SF3B2Q13435 895 aaKnown RBP9.3□□□□□ -0.92
LINC00299-204ENST00000454043 USPL1Q5W0Q7 1092 aa9.3□□□□□ -0.92
LINC00299-204ENST00000454043 AACSQ86V21 672 aa9.3□□□□□ -0.92
LINC00299-204ENST00000454043 TSEN2Q8NCE0 465 aaKnown RBP9.3□□□□□ -0.92
LINC00299-204ENST00000454043 TTLL11Q8NHH1 800 aa9.3□□□□□ -0.92
LINC00299-204ENST00000454043 TSPAN10Q9H1Z9 355 aaPredicted RBP9.3□□□□□ -0.92
LINC00299-204ENST00000454043 AFDNP55196 1824 aaKnown RBP9.3□□□□□ -0.92
LINC00299-204ENST00000454043 UBN2Q6ZU65 1347 aa9.3□□□□□ -0.92
LINC00299-204ENST00000454043 USP42Q9H9J4 1324 aaKnown RBP9.3□□□□□ -0.92
LINC00299-204ENST00000454043 COL5A3P25940 1745 aaPredicted RBP9.29□□□□□ -0.92
LINC00299-204ENST00000454043 SASH1O94885 1247 aa9.29□□□□□ -0.92
LINC00299-204ENST00000454043 MAPTP10636 758 aaKnown RBP9.29□□□□□ -0.92
LINC00299-204ENST00000454043 BMP4P12644 408 aa9.29□□□□□ -0.92
LINC00299-204ENST00000454043 SEC13P55735 322 aa9.29□□□□□ -0.92
LINC00299-204ENST00000454043 PSMA6P60900 246 aaKnown RBP9.29□□□□□ -0.92
LINC00299-204ENST00000454043 RASSF7Q02833 373 aa9.29□□□□□ -0.92
LINC00299-204ENST00000454043 PTK7Q13308 1070 aa9.29□□□□□ -0.92
LINC00299-204ENST00000454043 SLC10A5Q5PT55 438 aa9.29□□□□□ -0.92
LINC00299-204ENST00000454043 SH3PXD2AQ5TCZ1 1133 aa9.29□□□□□ -0.92
LINC00299-204ENST00000454043 LDHAL6AQ6ZMR3 332 aa9.29□□□□□ -0.92
LINC00299-204ENST00000454043 BICDL1Q6ZP65 573 aa9.29□□□□□ -0.92
LINC00299-204ENST00000454043 C1orf229Q6ZS94 237 aaPredicted RBP9.29□□□□□ -0.92
LINC00299-204ENST00000454043 NBPF5PQ86XG9 351 aaPredicted RBP9.29□□□□□ -0.92
LINC00299-204ENST00000454043 TICAM2Q86XR7 235 aa9.29□□□□□ -0.92
LINC00299-204ENST00000454043 CNTROBQ8N137 903 aa9.29□□□□□ -0.92
LINC00299-204ENST00000454043 SCARF2Q96GP6 870 aaPredicted RBP9.29□□□□□ -0.92
LINC00299-204ENST00000454043 CDC5LQ99459 802 aaKnown RBP9.29□□□□□ -0.92
LINC00299-204ENST00000454043 VRTNQ9H8Y1 702 aa9.29□□□□□ -0.92
LINC00299-204ENST00000454043 RGS17Q9UGC6 210 aaPredicted RBP9.29□□□□□ -0.92
LINC00299-204ENST00000454043 ZNF232Q9UNY5 417 aa9.29□□□□□ -0.92
LINC00299-204ENST00000454043 SALL3Q9BXA9 1300 aa9.29□□□□□ -0.92
LINC00299-204ENST00000454043 SBF2Q86WG5 1849 aa9.28□□□□□ -0.92
LINC00299-204ENST00000454043 FAM177BA6PVY3 158 aa9.28□□□□□ -0.92
LINC00299-204ENST00000454043 HIP1O00291 1037 aa9.28□□□□□ -0.92
LINC00299-204ENST00000454043 C21orf2O43822 256 aa9.28□□□□□ -0.92
LINC00299-204ENST00000454043 NTSR2O95665 410 aa9.28□□□□□ -0.92
LINC00299-204ENST00000454043 SDSP20132 328 aa9.28□□□□□ -0.92
LINC00299-204ENST00000454043 IGHMBP2P38935 993 aaKnown RBP9.28□□□□□ -0.92
LINC00299-204ENST00000454043 TFCP2Q12800 502 aa9.28□□□□□ -0.92
LINC00299-204ENST00000454043 SAMD5Q5TGI4 173 aa9.28□□□□□ -0.92
LINC00299-204ENST00000454043 OTUD7AQ8TE49 926 aaPredicted RBP9.28□□□□□ -0.92
LINC00299-204ENST00000454043 MPHOSPH8Q99549 860 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms