RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 PAGE1O75459 146 aa4.62□□□□□ -1.67
LRCH3-209ENST00000452660 CST3P01034 146 aaPredicted RBP4.62□□□□□ -1.67
LRCH3-209ENST00000452660 LCE4AQ5TA78 99 aa4.62□□□□□ -1.67
LRCH3-209ENST00000452660 MPRIPQ6WCQ1 1025 aa4.62□□□□□ -1.67
LRCH3-209ENST00000452660 AMIGO3Q86WK7 504 aa4.62□□□□□ -1.67
LRCH3-209ENST00000452660 ANKLE2Q86XL3 938 aa4.62□□□□□ -1.67
LRCH3-209ENST00000452660 FBXO15Q8NCQ5 510 aaPredicted RBP4.62□□□□□ -1.67
LRCH3-209ENST00000452660 HSPA12BQ96MM6 686 aa4.62□□□□□ -1.67
LRCH3-209ENST00000452660 CARS2Q9HA77 564 aaKnown RBP4.62□□□□□ -1.67
LRCH3-209ENST00000452660 C19orf73Q9NVV2 129 aa4.62□□□□□ -1.67
LRCH3-209ENST00000452660 MED14OSP0DP75 135 aa4.61□□□□□ -1.67
LRCH3-209ENST00000452660 RAC2P15153 192 aa4.61□□□□□ -1.67
LRCH3-209ENST00000452660 LRFN4Q6PJG9 635 aa4.61□□□□□ -1.67
LRCH3-209ENST00000452660 UBE3DQ7Z6J8 389 aa4.61□□□□□ -1.67
LRCH3-209ENST00000452660 C1QL4Q86Z23 238 aa4.61□□□□□ -1.67
LRCH3-209ENST00000452660 GAL3ST3Q96A11 431 aa4.61□□□□□ -1.67
LRCH3-209ENST00000452660 ALPK1Q96QP1 1244 aa4.61□□□□□ -1.67
LRCH3-209ENST00000452660 PRDM7Q9NQW5 492 aa4.61□□□□□ -1.67
LRCH3-209ENST00000452660 TPX2Q9ULW0 747 aaKnown RBP4.61□□□□□ -1.67
LRCH3-209ENST00000452660 CSADQ9Y600 493 aa4.61□□□□□ -1.67
LRCH3-209ENST00000452660 NFIBO00712 420 aa4.6□□□□□ -1.67
LRCH3-209ENST00000452660 CFPP27918 469 aa4.6□□□□□ -1.67
LRCH3-209ENST00000452660 INPP5AQ14642 412 aa4.6□□□□□ -1.67
LRCH3-209ENST00000452660 FYB2Q5VWT5 728 aa4.6□□□□□ -1.67
LRCH3-209ENST00000452660 LETMD1Q6P1Q0 360 aa4.6□□□□□ -1.67
LRCH3-209ENST00000452660 SYDE1Q6ZW31 735 aaPredicted RBP4.6□□□□□ -1.67
LRCH3-209ENST00000452660 MRPL41Q8IXM3 137 aaKnown RBP4.6□□□□□ -1.67
LRCH3-209ENST00000452660 PLPPR2Q96GM1 343 aa4.6□□□□□ -1.67
LRCH3-209ENST00000452660 LIN37Q96GY3 246 aaPredicted RBP4.6□□□□□ -1.67
LRCH3-209ENST00000452660 MIPEPQ99797 713 aa4.6□□□□□ -1.67
LRCH3-209ENST00000452660 GFRA2O00451 464 aa4.59□□□□□ -1.67
LRCH3-209ENST00000452660 CELA3AP09093 270 aa4.59□□□□□ -1.67
LRCH3-209ENST00000452660 RLBP1P12271 317 aa4.59□□□□□ -1.67
LRCH3-209ENST00000452660 ETV3P41162 512 aa4.59□□□□□ -1.67
LRCH3-209ENST00000452660 MAPK8P45983 427 aa4.59□□□□□ -1.67
LRCH3-209ENST00000452660 ETF1P62495 437 aaKnown RBP4.59□□□□□ -1.67
LRCH3-209ENST00000452660 RASIP1Q5U651 963 aa4.59□□□□□ -1.67
LRCH3-209ENST00000452660 SLC6A19Q695T7 634 aa4.59□□□□□ -1.67
LRCH3-209ENST00000452660 MPZL3Q6UWV2 235 aa4.59□□□□□ -1.67
LRCH3-209ENST00000452660 LRRC56Q8IYG6 542 aaPredicted RBP4.59□□□□□ -1.67
LRCH3-209ENST00000452660 FBRSQ9HAH7 460 aa4.59□□□□□ -1.67
LRCH3-209ENST00000452660 ATP13A1Q9HD20 1204 aa4.59□□□□□ -1.67
LRCH3-209ENST00000452660 ADAM30Q9UKF2 790 aa4.59□□□□□ -1.67
LRCH3-209ENST00000452660 PRAMEF27A3QJZ7 478 aa4.58□□□□□ -1.68
LRCH3-209ENST00000452660 PRR33A8MZF0 331 aa4.58□□□□□ -1.68
LRCH3-209ENST00000452660 KRT1P04264 644 aa4.58□□□□□ -1.68
LRCH3-209ENST00000452660 USP17L7P0C7H9 530 aa4.58□□□□□ -1.68
LRCH3-209ENST00000452660 GLDCP23378 1020 aa4.58□□□□□ -1.68
LRCH3-209ENST00000452660 KCNA1Q09470 495 aa4.58□□□□□ -1.68
LRCH3-209ENST00000452660 WIPI1Q5MNZ9 446 aaPredicted RBP4.58□□□□□ -1.68
LRCH3-209ENST00000452660 DIEXFQ68CQ4 756 aaKnown RBP4.58□□□□□ -1.68
LRCH3-209ENST00000452660 TTBK2Q6IQ55 1244 aa4.58□□□□□ -1.68
LRCH3-209ENST00000452660 PRR23BQ6ZRT6 265 aa4.58□□□□□ -1.68
LRCH3-209ENST00000452660 CCDC84Q86UT8 332 aaPredicted RBP4.58□□□□□ -1.68
LRCH3-209ENST00000452660 SLC26A8Q96RN1 970 aa4.58□□□□□ -1.68
LRCH3-209ENST00000452660 TRIT1Q9H3H1 467 aaKnown RBP4.58□□□□□ -1.68
LRCH3-209ENST00000452660 PATL2C9JE40 543 aaKnown RBP4.57□□□□□ -1.68
LRCH3-209ENST00000452660 H3BS24 57 aa4.57□□□□□ -1.68
LRCH3-209ENST00000452660 HPXP02790 462 aa4.57□□□□□ -1.68
LRCH3-209ENST00000452660 GNA15P30679 374 aa4.57□□□□□ -1.68
LRCH3-209ENST00000452660 PTPN11Q06124 597 aaPredicted RBP4.57□□□□□ -1.68
LRCH3-209ENST00000452660 PDE4BQ07343 736 aa4.57□□□□□ -1.68
LRCH3-209ENST00000452660 NKG7Q16617 165 aa4.57□□□□□ -1.68
LRCH3-209ENST00000452660 CDKAL1Q5VV42 579 aa4.57□□□□□ -1.68
LRCH3-209ENST00000452660 PRAMEF13Q5VWM6 474 aa4.57□□□□□ -1.68
LRCH3-209ENST00000452660 AGMOQ6ZNB7 445 aa4.57□□□□□ -1.68
LRCH3-209ENST00000452660 LILRA2Q8N149 483 aa4.57□□□□□ -1.68
LRCH3-209ENST00000452660 ABHD4Q8TB40 342 aa4.57□□□□□ -1.68
LRCH3-209ENST00000452660 UBE2FQ969M7 185 aa4.57□□□□□ -1.68
LRCH3-209ENST00000452660 KRTAP4-2Q9BYR5 136 aa4.57□□□□□ -1.68
LRCH3-209ENST00000452660 EPB41L4BQ9H329 900 aa4.57□□□□□ -1.68
LRCH3-209ENST00000452660 CD320Q9NPF0 282 aa4.57□□□□□ -1.68
LRCH3-209ENST00000452660 TMEM59LQ9UK28 342 aa4.57□□□□□ -1.68
LRCH3-209ENST00000452660 FBXO24O75426 580 aa4.56□□□□□ -1.68
LRCH3-209ENST00000452660 ESR1P03372 595 aa4.56□□□□□ -1.68
LRCH3-209ENST00000452660 TMEM253P0C7T8 217 aa4.56□□□□□ -1.68
LRCH3-209ENST00000452660 GRK4P32298 578 aa4.56□□□□□ -1.68
LRCH3-209ENST00000452660 TNK2Q07912 1038 aa4.56□□□□□ -1.68
LRCH3-209ENST00000452660 NR0B2Q15466 257 aa4.56□□□□□ -1.68
LRCH3-209ENST00000452660 GAB4Q2WGN9 574 aa4.56□□□□□ -1.68
LRCH3-209ENST00000452660 MCATQ8IVS2 390 aaKnown RBP4.56□□□□□ -1.68
LRCH3-209ENST00000452660 GPR62Q9BZJ7 368 aa4.56□□□□□ -1.68
LRCH3-209ENST00000452660 TTF2Q9UNY4 1162 aaKnown RBP4.56□□□□□ -1.68
LRCH3-209ENST00000452660 CNTNAP4Q9C0A0 1308 aa4.55□□□□□ -1.68
LRCH3-209ENST00000452660 PRPF40AO75400 957 aaKnown RBP4.55□□□□□ -1.68
LRCH3-209ENST00000452660 C1QTNF9P0C862 333 aa4.55□□□□□ -1.68
LRCH3-209ENST00000452660 ZSCAN22P10073 491 aaPredicted RBP4.55□□□□□ -1.68
LRCH3-209ENST00000452660 LMNB1P20700 586 aa4.55□□□□□ -1.68
LRCH3-209ENST00000452660 EIF4BP23588 611 aaKnown RBP4.55□□□□□ -1.68
LRCH3-209ENST00000452660 RPL6Q02878 288 aaKnown RBP4.55□□□□□ -1.68
LRCH3-209ENST00000452660 LCNL1Q6ZST4 164 aa4.55□□□□□ -1.68
LRCH3-209ENST00000452660 TTLL10Q6ZVT0 673 aa4.55□□□□□ -1.68
LRCH3-209ENST00000452660 TTC6Q86TZ1 520 aa4.55□□□□□ -1.68
LRCH3-209ENST00000452660 IRF2BP1Q8IU81 584 aa4.55□□□□□ -1.68
LRCH3-209ENST00000452660 PDZD8Q8NEN9 1154 aa4.55□□□□□ -1.68
LRCH3-209ENST00000452660 MYLIPQ8WY64 445 aa4.55□□□□□ -1.68
LRCH3-209ENST00000452660 TMEM87BQ96K49 555 aa4.55□□□□□ -1.68
LRCH3-209ENST00000452660 NOC4LQ9BVI4 516 aaKnown RBP4.55□□□□□ -1.68
LRCH3-209ENST00000452660 NSUN3Q9H649 340 aaKnown RBP4.55□□□□□ -1.68
LRCH3-209ENST00000452660 ZSWIM5Q9P217 1185 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms