RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 SAMD1Q6SPF0 538 aaPredicted RBP10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 NUP88Q99567 741 aaPredicted RBP10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 ADD3Q9UEY8 706 aaKnown RBP10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 RGPD1P0DJD0 1748 aa10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 KDRP35968 1356 aa10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 GRM8O00222 908 aa10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 PLCD1P51178 756 aa10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 MORC3Q14149 939 aa10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 E2F5Q15329 346 aa10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 ZKSCAN8Q15776 578 aaPredicted RBP10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 NAA35Q5VZE5 725 aa10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 CTAGE1Q96RT6 745 aa10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 DBNLQ9UJU6 430 aaKnown RBP10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 CCDC9Q9Y3X0 531 aaKnown RBP10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 MYH8P13535 1937 aa10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 GOLGA6L7A0A1B0GV03 622 aa10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 HSF2BPO75031 334 aa10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 GBP2P32456 591 aaPredicted RBP10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 PLCB4Q15147 1175 aa10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 KIRREL3Q8IZU9 778 aa10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 AENQ8WTP8 325 aaKnown RBP10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 RRP36Q96EU6 259 aaKnown RBP10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 MON2Q7Z3U7 1717 aa10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 ZMYM6O95789 1325 aa10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 POLR2DO15514 142 aaKnown RBP10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 PDHBP11177 359 aa10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 ERCC5P28715 1186 aaPredicted RBP10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 PBX1P40424 430 aa10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 GRIPAP1Q4V328 841 aa10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 KCTD16Q68DU8 428 aa10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 JAKMIP2Q96AA8 810 aa10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 DSCC1Q9BVC3 393 aa10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 ABHD10Q9NUJ1 306 aa10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 SERTAD1Q9UHV2 236 aa10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 IGSF1Q8N6C5 1336 aa10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 C3P01024 1663 aa10.6□□□□□ -0.71
SYNPO2-204ENST00000448416 SPATA31D1Q6ZQQ2 1576 aa10.59□□□□□ -0.71
SYNPO2-204ENST00000448416 PSMD14O00487 310 aa10.59□□□□□ -0.71
SYNPO2-204ENST00000448416 A1BGP04217 495 aa10.59□□□□□ -0.71
SYNPO2-204ENST00000448416 EIF4A1P60842 406 aaKnown RBP10.59□□□□□ -0.71
SYNPO2-204ENST00000448416 SPATA1Q5VX52 437 aa10.59□□□□□ -0.71
SYNPO2-204ENST00000448416 APTXQ7Z2E3 356 aaKnown RBP10.59□□□□□ -0.71
SYNPO2-204ENST00000448416 CCDC50Q8IVM0 306 aa10.59□□□□□ -0.71
SYNPO2-204ENST00000448416 PARP9Q8IXQ6 854 aa10.59□□□□□ -0.71
SYNPO2-204ENST00000448416 GRAMD1CQ8IYS0 662 aa10.59□□□□□ -0.71
SYNPO2-204ENST00000448416 TRIML1Q8N9V2 468 aa10.59□□□□□ -0.71
SYNPO2-204ENST00000448416 ALG1Q9BT22 464 aa10.59□□□□□ -0.71
SYNPO2-204ENST00000448416 EPN3Q9H201 632 aa10.59□□□□□ -0.71
SYNPO2-204ENST00000448416 EPN1Q9Y6I3 576 aaPredicted RBP10.59□□□□□ -0.71
SYNPO2-204ENST00000448416 LSP1P33241 339 aa10.59□□□□□ -0.71
SYNPO2-204ENST00000448416 TTMPQ5BVD1 217 aa10.59□□□□□ -0.71
SYNPO2-204ENST00000448416 IQCEQ6IPM2 695 aa10.59□□□□□ -0.71
SYNPO2-204ENST00000448416 SH2D3CQ8N5H7 860 aa10.59□□□□□ -0.71
SYNPO2-204ENST00000448416 ZNF473Q8WTR7 871 aaKnown RBP10.59□□□□□ -0.71
SYNPO2-204ENST00000448416 KAZALD1Q96I82 304 aa10.59□□□□□ -0.71
SYNPO2-204ENST00000448416 AIFM3Q96NN9 605 aa10.59□□□□□ -0.71
SYNPO2-204ENST00000448416 HAUS4Q9H6D7 363 aa10.59□□□□□ -0.71
SYNPO2-204ENST00000448416 POLD4Q9HCU8 107 aa10.59□□□□□ -0.71
SYNPO2-204ENST00000448416 PEAK1Q9H792 1746 aa10.59□□□□□ -0.71
SYNPO2-204ENST00000448416 RPSAP08865 295 aaKnown RBP10.59□□□□□ -0.71
SYNPO2-204ENST00000448416 CCNHP51946 323 aaPredicted RBP10.59□□□□□ -0.71
SYNPO2-204ENST00000448416 C2orf54Q08AI8 447 aa10.59□□□□□ -0.71
SYNPO2-204ENST00000448416 KRI1Q8N9T8 703 aaKnown RBP10.59□□□□□ -0.71
SYNPO2-204ENST00000448416 KRT9P35527 623 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 GCKP35557 465 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 TBC1D8BQ0IIM8 1120 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 CCDC122Q5T0U0 273 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 KSR2Q6VAB6 950 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 CCDC121Q6ZUS5 278 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 ARMC2Q8NEN0 867 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 IRF6O14896 467 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 RTN2O75298 545 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 SKAP2O75563 359 aaPredicted RBP10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 HSPD1P10809 573 aaKnown RBP10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 EPB41P11171 864 aaKnown RBP10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 FECHP22830 423 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 CDC25AP30304 524 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 CCT6AP40227 531 aaKnown RBP10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 SARSP49591 514 aaKnown RBP10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 GUCY1A3Q02108 690 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 PAPD7Q5XG87 772 aaKnown RBP10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 KRT40Q6A162 431 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 KBTBD3Q8NAB2 608 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 AIDAQ96BJ3 306 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 MAP3K14Q99558 947 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 DBF4Q9UBU7 674 aaPredicted RBP10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 CEMIPQ8WUJ3 1361 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 N4BP3O15049 544 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 NDUFA10O95299 355 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 NNTQ13423 1086 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 ALS2CLQ60I27 953 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 CYB5D1Q6P9G0 228 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 ELOA2Q8IYF1 753 aaPredicted RBP10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 CHP1Q99653 195 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 SH3TC1Q8TE82 1336 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 SYNRGQ9UMZ2 1314 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 ZNF185O15231 689 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 TNNI3KQ59H18 835 aa10.58□□□□□ -0.72
SYNPO2-204ENST00000448416 NT5DC1Q5TFE4 455 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms