RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 FAM155AB1AL88 458 aaPredicted RBP16.76■□□□□ 0.27
SSBP3-208ENST00000444533 AOC2O75106 756 aa16.76■□□□□ 0.27
SSBP3-208ENST00000444533 PTPRAP18433 802 aa16.76■□□□□ 0.27
SSBP3-208ENST00000444533 CDK8P49336 464 aa16.76■□□□□ 0.27
SSBP3-208ENST00000444533 KIF23Q02241 960 aaPredicted RBP16.76■□□□□ 0.27
SSBP3-208ENST00000444533 GABPAQ06546 454 aa16.76■□□□□ 0.27
SSBP3-208ENST00000444533 IMMTQ16891 758 aaKnown RBP16.76■□□□□ 0.27
SSBP3-208ENST00000444533 VPS53Q5VIR6 699 aa16.76■□□□□ 0.27
SSBP3-208ENST00000444533 DYNLL2Q96FJ2 89 aa16.76■□□□□ 0.27
SSBP3-208ENST00000444533 ZHX2Q9Y6X8 837 aa16.76■□□□□ 0.27
SSBP3-208ENST00000444533 BAZ2AQ9UIF9 1905 aaKnown RBP16.75■□□□□ 0.27
SSBP3-208ENST00000444533 ZNF213O14771 459 aa16.75■□□□□ 0.27
SSBP3-208ENST00000444533 SGSM2O43147 1006 aa16.75■□□□□ 0.27
SSBP3-208ENST00000444533 GDF11O95390 407 aa16.75■□□□□ 0.27
SSBP3-208ENST00000444533 FGAP02671 866 aa16.75■□□□□ 0.27
SSBP3-208ENST00000444533 CETPP11597 493 aa16.75■□□□□ 0.27
SSBP3-208ENST00000444533 RAB3GAP1Q15042 981 aa16.75■□□□□ 0.27
SSBP3-208ENST00000444533 STK11IPQ8N1F8 1099 aa16.75■□□□□ 0.27
SSBP3-208ENST00000444533 RNF41Q9H4P4 317 aaPredicted RBP16.75■□□□□ 0.27
SSBP3-208ENST00000444533 DNAJC18Q9H819 358 aa16.75■□□□□ 0.27
SSBP3-208ENST00000444533 TOMM22Q9NS69 142 aa16.75■□□□□ 0.27
SSBP3-208ENST00000444533 DDX60LQ5H9U9 1706 aaKnown RBP16.74■□□□□ 0.27
SSBP3-208ENST00000444533 CXCL11O14625 94 aa16.74■□□□□ 0.27
SSBP3-208ENST00000444533 EIF5BO60841 1220 aaKnown RBP16.74■□□□□ 0.27
SSBP3-208ENST00000444533 GH2P01242 217 aa16.74■□□□□ 0.27
SSBP3-208ENST00000444533 SLURP2P0DP57 97 aa16.74■□□□□ 0.27
SSBP3-208ENST00000444533 PCP11498 1178 aaKnown RBP16.74■□□□□ 0.27
SSBP3-208ENST00000444533 SHMT1P34896 483 aa16.74■□□□□ 0.27
SSBP3-208ENST00000444533 TMEM179Q6ZVK1 233 aa16.74■□□□□ 0.27
SSBP3-208ENST00000444533 ZBTB21Q9ULJ3 1066 aa16.74■□□□□ 0.27
SSBP3-208ENST00000444533 U3KPZ7 1027 aaPredicted RBP16.74■□□□□ 0.27
SSBP3-208ENST00000444533 ROBO3Q96MS0 1386 aa16.74■□□□□ 0.27
SSBP3-208ENST00000444533 OTOFQ9HC10 1997 aa16.73■□□□□ 0.27
SSBP3-208ENST00000444533 IRF6O14896 467 aa16.73■□□□□ 0.27
SSBP3-208ENST00000444533 CA12O43570 354 aa16.73■□□□□ 0.27
SSBP3-208ENST00000444533 ALDH1A1P00352 501 aa16.73■□□□□ 0.27
SSBP3-208ENST00000444533 PPP4R3BQ5MIZ7 849 aa16.73■□□□□ 0.27
SSBP3-208ENST00000444533 FASTKD5Q7L8L6 764 aaKnown RBP16.73■□□□□ 0.27
SSBP3-208ENST00000444533 SLC44A5Q8NCS7 719 aa16.73■□□□□ 0.27
SSBP3-208ENST00000444533 ZNF280CQ8ND82 737 aa16.73■□□□□ 0.27
SSBP3-208ENST00000444533 FEZ1Q99689 392 aa16.73■□□□□ 0.27
SSBP3-208ENST00000444533 ESYT1Q9BSJ8 1104 aa16.73■□□□□ 0.27
SSBP3-208ENST00000444533 ANAPC4Q9UJX5 808 aa16.73■□□□□ 0.27
SSBP3-208ENST00000444533 DOCK1Q14185 1865 aa16.72■□□□□ 0.27
SSBP3-208ENST00000444533 CCL15-CCL14A0A0B4J2E2 113 aa16.72■□□□□ 0.27
SSBP3-208ENST00000444533 TRIM75PA6NK02 468 aa16.72■□□□□ 0.27
SSBP3-208ENST00000444533 TSPY3P0CV98 308 aa16.72■□□□□ 0.27
SSBP3-208ENST00000444533 TSPY8P0CW00 308 aa16.72■□□□□ 0.27
SSBP3-208ENST00000444533 NT5C2P49902 561 aa16.72■□□□□ 0.27
SSBP3-208ENST00000444533 CCL15Q16663 113 aa16.72■□□□□ 0.27
SSBP3-208ENST00000444533 MFSD6Q6ZSS7 791 aa16.72■□□□□ 0.27
SSBP3-208ENST00000444533 JMYQ8N9B5 988 aa16.72■□□□□ 0.27
SSBP3-208ENST00000444533 CNKSR2Q8WXI2 1034 aa16.72■□□□□ 0.27
SSBP3-208ENST00000444533 SH2D4AQ9H788 454 aa16.72■□□□□ 0.27
SSBP3-208ENST00000444533 ARHGEF10LQ9HCE6 1279 aa16.72■□□□□ 0.27
SSBP3-208ENST00000444533 ANO2Q9NQ90 1003 aa16.72■□□□□ 0.27
SSBP3-208ENST00000444533 TMOD4Q9NZQ9 345 aa16.72■□□□□ 0.27
SSBP3-208ENST00000444533 GTF3C3Q9Y5Q9 886 aa16.72■□□□□ 0.27
SSBP3-208ENST00000444533 TSPY2A6NKD2 308 aa16.71■□□□□ 0.27
SSBP3-208ENST00000444533 CTDSPL2Q05D32 466 aa16.71■□□□□ 0.27
SSBP3-208ENST00000444533 SPP2Q13103 211 aa16.71■□□□□ 0.27
SSBP3-208ENST00000444533 KCNH4Q9UQ05 1017 aa16.71■□□□□ 0.27
SSBP3-208ENST00000444533 AFG3L2Q9Y4W6 797 aa16.71■□□□□ 0.27
SSBP3-208ENST00000444533 SIPA1L1O43166 1804 aa16.7■□□□□ 0.26
SSBP3-208ENST00000444533 LAMB1P07942 1786 aa16.7■□□□□ 0.26
SSBP3-208ENST00000444533 C19orf81C9J6K1 198 aa16.7■□□□□ 0.26
SSBP3-208ENST00000444533 USP17L10C9JJH3 530 aa16.7■□□□□ 0.26
SSBP3-208ENST00000444533 RANBP6O60518 1105 aaKnown RBP16.7■□□□□ 0.26
SSBP3-208ENST00000444533 REC8O95072 547 aa16.7■□□□□ 0.26
SSBP3-208ENST00000444533 GJA5P36382 358 aa16.7■□□□□ 0.26
SSBP3-208ENST00000444533 TM4SF4P48230 202 aa16.7■□□□□ 0.26
SSBP3-208ENST00000444533 USP14P54578 494 aa16.7■□□□□ 0.26
SSBP3-208ENST00000444533 HAND2P61296 217 aa16.7■□□□□ 0.26
SSBP3-208ENST00000444533 TRDNQ13061 729 aa16.7■□□□□ 0.26
SSBP3-208ENST00000444533 RRP12Q5JTH9 1297 aaKnown RBP16.7■□□□□ 0.26
SSBP3-208ENST00000444533 RNF20Q5VTR2 975 aa16.7■□□□□ 0.26
SSBP3-208ENST00000444533 WDR18Q9BV38 432 aa16.7■□□□□ 0.26
SSBP3-208ENST00000444533 KANSL2Q9H9L4 492 aa16.7■□□□□ 0.26
SSBP3-208ENST00000444533 MYH8P13535 1937 aa16.69■□□□□ 0.26
SSBP3-208ENST00000444533 FOXP2O15409 715 aa16.69■□□□□ 0.26
SSBP3-208ENST00000444533 PRDM1O75626 825 aa16.69■□□□□ 0.26
SSBP3-208ENST00000444533 AKR1B1P15121 316 aa16.69■□□□□ 0.26
SSBP3-208ENST00000444533 ATP2B2Q01814 1243 aa16.69■□□□□ 0.26
SSBP3-208ENST00000444533 EVX2Q03828 476 aa16.69■□□□□ 0.26
SSBP3-208ENST00000444533 ICA1Q05084 483 aa16.69■□□□□ 0.26
SSBP3-208ENST00000444533 PABPC4Q13310 644 aaKnown RBP eCLIP16.69■□□□□ 0.26
SSBP3-208ENST00000444533 RRP1BQ14684 758 aaKnown RBP16.69■□□□□ 0.26
SSBP3-208ENST00000444533 SEPT2Q15019 361 aa16.69■□□□□ 0.26
SSBP3-208ENST00000444533 AKNAD1Q5T1N1 836 aa16.69■□□□□ 0.26
SSBP3-208ENST00000444533 GADL1Q6ZQY3 521 aa16.69■□□□□ 0.26
SSBP3-208ENST00000444533 ESR2Q92731 530 aa16.69■□□□□ 0.26
SSBP3-208ENST00000444533 CNNM2Q9H8M5 875 aa16.69■□□□□ 0.26
SSBP3-208ENST00000444533 RASA1P20936 1047 aa16.68■□□□□ 0.26
SSBP3-208ENST00000444533 BACE1P56817 501 aa16.68■□□□□ 0.26
SSBP3-208ENST00000444533 TFAP4Q01664 338 aa16.68■□□□□ 0.26
SSBP3-208ENST00000444533 IFNL1Q8IU54 200 aa16.68■□□□□ 0.26
SSBP3-208ENST00000444533 STAG1Q8WVM7 1258 aa16.68■□□□□ 0.26
SSBP3-208ENST00000444533 MS4A4AQ96JQ5 239 aa16.68■□□□□ 0.26
SSBP3-208ENST00000444533 KRT23Q9C075 422 aa16.68■□□□□ 0.26
SSBP3-208ENST00000444533 ZCCHC17Q9NP64 241 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms