RNA–Protein interactions for RNA: ENST00000443003.2

RPSA-202, Transcript of ribosomal protein SA, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RPSA, Length 1,032 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-202ENST00000443003 SOCS4Q8WXH5 440 aa9.21□□□□□ -0.94
RPSA-202ENST00000443003 CLUAP1Q96AJ1 413 aa9.21□□□□□ -0.94
RPSA-202ENST00000443003 GUCD1Q96NT3 240 aa9.21□□□□□ -0.94
RPSA-202ENST00000443003 TXNRD2Q9NNW7 524 aa9.21□□□□□ -0.94
RPSA-202ENST00000443003 TMOD4Q9NZQ9 345 aa9.21□□□□□ -0.94
RPSA-202ENST00000443003 RAI14Q9P0K7 980 aa9.21□□□□□ -0.94
RPSA-202ENST00000443003 COL2A1P02458 1487 aaPredicted RBP9.21□□□□□ -0.94
RPSA-202ENST00000443003 GPR75-ASB3A0A0A6YYF3 556 aa9.2□□□□□ -0.94
RPSA-202ENST00000443003 A0A1B0GUL7 405 aa9.2□□□□□ -0.94
RPSA-202ENST00000443003 TBC1D12O60347 775 aa9.2□□□□□ -0.94
RPSA-202ENST00000443003 GDF11O95390 407 aa9.2□□□□□ -0.94
RPSA-202ENST00000443003 CENPBP07199 599 aaPredicted RBP9.2□□□□□ -0.94
RPSA-202ENST00000443003 CAP2P40123 477 aa9.2□□□□□ -0.94
RPSA-202ENST00000443003 HERVK_113P62684 666 aa9.2□□□□□ -0.94
RPSA-202ENST00000443003 CACNB2Q08289 660 aaPredicted RBP9.2□□□□□ -0.94
RPSA-202ENST00000443003 MAP3K21Q5TCX8 1036 aa9.2□□□□□ -0.94
RPSA-202ENST00000443003 WDR78Q5VTH9 848 aa9.2□□□□□ -0.94
RPSA-202ENST00000443003 TBC1D9Q6ZT07 1266 aa9.2□□□□□ -0.94
RPSA-202ENST00000443003 ITPRIPQ8IWB1 547 aa9.2□□□□□ -0.94
RPSA-202ENST00000443003 GPRC5AQ8NFJ5 357 aa9.2□□□□□ -0.94
RPSA-202ENST00000443003 ZNF384Q8TF68 577 aa9.2□□□□□ -0.94
RPSA-202ENST00000443003 XAGE2Q96GT9 111 aa9.2□□□□□ -0.94
RPSA-202ENST00000443003 NEUROD6Q96NK8 337 aa9.2□□□□□ -0.94
RPSA-202ENST00000443003 P2RX7Q99572 595 aaKnown RBP9.2□□□□□ -0.94
RPSA-202ENST00000443003 LBHD1Q9BQE6 289 aaPredicted RBP9.2□□□□□ -0.94
RPSA-202ENST00000443003 NOL10Q9BSC4 688 aaKnown RBP9.2□□□□□ -0.94
RPSA-202ENST00000443003 TRIM34Q9BYJ4 488 aa9.2□□□□□ -0.94
RPSA-202ENST00000443003 TBC1D2Q9BYX2 928 aa9.2□□□□□ -0.94
RPSA-202ENST00000443003 MORF4L1Q9UBU8 362 aa9.2□□□□□ -0.94
RPSA-202ENST00000443003 FBXO3Q9UK99 471 aa9.2□□□□□ -0.94
RPSA-202ENST00000443003 NDUFB9Q9Y6M9 179 aa9.2□□□□□ -0.94
RPSA-202ENST00000443003 COL6A1P12109 1028 aa9.19□□□□□ -0.94
RPSA-202ENST00000443003 RGS2P41220 211 aa9.19□□□□□ -0.94
RPSA-202ENST00000443003 ATN1P54259 1190 aaPredicted RBP9.19□□□□□ -0.94
RPSA-202ENST00000443003 GSTO1P78417 241 aa9.19□□□□□ -0.94
RPSA-202ENST00000443003 TFCP2Q12800 502 aa9.19□□□□□ -0.94
RPSA-202ENST00000443003 MVPQ14764 893 aaKnown RBP9.19□□□□□ -0.94
RPSA-202ENST00000443003 SHROOM1Q2M3G4 852 aaPredicted RBP9.19□□□□□ -0.94
RPSA-202ENST00000443003 SH3D19Q5HYK7 790 aa9.19□□□□□ -0.94
RPSA-202ENST00000443003 GORABQ5T7V8 394 aa9.19□□□□□ -0.94
RPSA-202ENST00000443003 ZNF697Q5TEC3 545 aa9.19□□□□□ -0.94
RPSA-202ENST00000443003 GPR142Q7Z601 462 aa9.19□□□□□ -0.94
RPSA-202ENST00000443003 SH3RF3Q8TEJ3 882 aaPredicted RBP9.19□□□□□ -0.94
RPSA-202ENST00000443003 FAM163AQ96GL9 167 aaPredicted RBP9.19□□□□□ -0.94
RPSA-202ENST00000443003 APBA2Q99767 749 aa9.19□□□□□ -0.94
RPSA-202ENST00000443003 SENP6Q9GZR1 1112 aaPredicted RBP9.19□□□□□ -0.94
RPSA-202ENST00000443003 PORCNQ9H237 461 aa9.19□□□□□ -0.94
RPSA-202ENST00000443003 DDX19BQ9UMR2 479 aa9.19□□□□□ -0.94
RPSA-202ENST00000443003 PDS5AQ29RF7 1337 aaKnown RBP9.19□□□□□ -0.94
RPSA-202ENST00000443003 RLFQ13129 1914 aa9.19□□□□□ -0.94
RPSA-202ENST00000443003 LDHCP07864 332 aa9.18□□□□□ -0.94
RPSA-202ENST00000443003 CNGA1P29973 690 aa9.18□□□□□ -0.94
RPSA-202ENST00000443003 MAPK4P31152 587 aa9.18□□□□□ -0.94
RPSA-202ENST00000443003 RRP1P56182 461 aaKnown RBP9.18□□□□□ -0.94
RPSA-202ENST00000443003 BACE1P56817 501 aa9.18□□□□□ -0.94
RPSA-202ENST00000443003 ERVK-9P63128 1117 aa9.18□□□□□ -0.94
RPSA-202ENST00000443003 ERVK-24P63145 666 aa9.18□□□□□ -0.94
RPSA-202ENST00000443003 ZYXQ15942 572 aaKnown RBP9.18□□□□□ -0.94
RPSA-202ENST00000443003 MAPKAPK5Q8IW41 473 aa9.18□□□□□ -0.94
RPSA-202ENST00000443003 TRMT44Q8IYL2 757 aaKnown RBP9.18□□□□□ -0.94
RPSA-202ENST00000443003 CRACR2BQ8N4Y2 399 aaPredicted RBP9.18□□□□□ -0.94
RPSA-202ENST00000443003 TMEM57Q8N5G2 664 aa9.18□□□□□ -0.94
RPSA-202ENST00000443003 SPATA5Q8NB90 893 aa9.18□□□□□ -0.94
RPSA-202ENST00000443003 NSUN4Q96CB9 384 aaKnown RBP9.18□□□□□ -0.94
RPSA-202ENST00000443003 COPRSQ9NQ92 184 aa9.18□□□□□ -0.94
RPSA-202ENST00000443003 PRDM5Q9NQX1 630 aaPredicted RBP9.18□□□□□ -0.94
RPSA-202ENST00000443003 AATFQ9NY61 560 aaKnown RBP eCLIP9.18□□□□□ -0.94not detected■■□□□ 12.9
RPSA-202ENST00000443003 HMG20BQ9P0W2 317 aa9.18□□□□□ -0.94
RPSA-202ENST00000443003 PRKAG2Q9UGJ0 569 aa9.18□□□□□ -0.94
RPSA-202ENST00000443003 HERC5Q9UII4 1024 aaKnown RBP9.18□□□□□ -0.94
RPSA-202ENST00000443003 UNC80Q8N2C7 3258 aa9.18□□□□□ -0.94
RPSA-202ENST00000443003 USP17L10C9JJH3 530 aa9.17□□□□□ -0.94
RPSA-202ENST00000443003 SRGAP3O43295 1099 aa9.17□□□□□ -0.94
RPSA-202ENST00000443003 ASNSP08243 561 aa9.17□□□□□ -0.94
RPSA-202ENST00000443003 XRCC5P13010 732 aaKnown RBP9.17□□□□□ -0.94
RPSA-202ENST00000443003 JAG1P78504 1218 aa9.17□□□□□ -0.94
RPSA-202ENST00000443003 Q3C1V9 767 aa9.17□□□□□ -0.94
RPSA-202ENST00000443003 LHX8Q68G74 356 aa9.17□□□□□ -0.94
RPSA-202ENST00000443003 PLEKHH3Q7Z736 793 aa9.17□□□□□ -0.94
RPSA-202ENST00000443003 TGFBRAP1Q8WUH2 860 aa9.17□□□□□ -0.94
RPSA-202ENST00000443003 MEIS3Q99687 375 aa9.17□□□□□ -0.94
RPSA-202ENST00000443003 FEZ1Q99689 392 aa9.17□□□□□ -0.94
RPSA-202ENST00000443003 DNAJC18Q9H819 358 aa9.17□□□□□ -0.94
RPSA-202ENST00000443003 LRP2BPQ9P2M1 347 aa9.17□□□□□ -0.94
RPSA-202ENST00000443003 PI4KBQ9UBF8 816 aa9.17□□□□□ -0.94
RPSA-202ENST00000443003 RBPJLQ9UBG7 517 aa9.17□□□□□ -0.94
RPSA-202ENST00000443003 ZBTB21Q9ULJ3 1066 aa9.17□□□□□ -0.94
RPSA-202ENST00000443003 AKAP2Q9Y2D5 859 aa9.17□□□□□ -0.94
RPSA-202ENST00000443003 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.17□□□□□ -0.94
RPSA-202ENST00000443003 MYH8P13535 1937 aa9.17□□□□□ -0.94
RPSA-202ENST00000443003 FLT1P17948 1338 aa9.16□□□□□ -0.94
RPSA-202ENST00000443003 C19orf81C9J6K1 198 aa9.16□□□□□ -0.94
RPSA-202ENST00000443003 POTEB2H3BUK9 544 aa9.16□□□□□ -0.94
RPSA-202ENST00000443003 GNAI2P04899 355 aa9.16□□□□□ -0.94
RPSA-202ENST00000443003 HOXA7P31268 230 aaPredicted RBP9.16□□□□□ -0.94
RPSA-202ENST00000443003 MCAMP43121 646 aa9.16□□□□□ -0.94
RPSA-202ENST00000443003 RTP1P59025 263 aa9.16□□□□□ -0.94
RPSA-202ENST00000443003 CACNB1Q02641 598 aaPredicted RBP9.16□□□□□ -0.94
RPSA-202ENST00000443003 MAP2K5Q13163 448 aa9.16□□□□□ -0.94
RPSA-202ENST00000443003 MFSD14CQ5VZR4 134 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms