RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 CDK8P49336 464 aa14.71□□□□□ -0.05
USP1-203ENST00000442679 GTF2A2P52657 109 aa14.71□□□□□ -0.05
USP1-203ENST00000442679 INHBEP58166 350 aa14.71□□□□□ -0.05
USP1-203ENST00000442679 SREBF2Q12772 1141 aa14.71□□□□□ -0.05
USP1-203ENST00000442679 C16orf86Q6ZW13 317 aa14.71□□□□□ -0.05
USP1-203ENST00000442679 STK11IPQ8N1F8 1099 aa14.71□□□□□ -0.05
USP1-203ENST00000442679 SLC44A5Q8NCS7 719 aa14.71□□□□□ -0.05
USP1-203ENST00000442679 GINM1Q9NU53 330 aa14.71□□□□□ -0.05
USP1-203ENST00000442679 WBP1LQ9NX94 342 aa14.71□□□□□ -0.05
USP1-203ENST00000442679 PCNTO95613 3336 aa14.71□□□□□ -0.05
USP1-203ENST00000442679 NAV1Q8NEY1 1877 aa14.71□□□□□ -0.05
USP1-203ENST00000442679 OTOFQ9HC10 1997 aa14.71□□□□□ -0.06
USP1-203ENST00000442679 DDX60LQ5H9U9 1706 aaKnown RBP14.7□□□□□ -0.06
USP1-203ENST00000442679 USP17L5A8MUK1 530 aa14.7□□□□□ -0.06
USP1-203ENST00000442679 GH2P01242 217 aa14.7□□□□□ -0.06
USP1-203ENST00000442679 FGAP02671 866 aa14.7□□□□□ -0.06
USP1-203ENST00000442679 ASNSP08243 561 aa14.7□□□□□ -0.06
USP1-203ENST00000442679 SNAPC2Q13487 334 aa14.7□□□□□ -0.06
USP1-203ENST00000442679 ABCB5Q2M3G0 1257 aa14.7□□□□□ -0.06
USP1-203ENST00000442679 SHROOM1Q2M3G4 852 aaPredicted RBP14.7□□□□□ -0.06
USP1-203ENST00000442679 CCDC84Q86UT8 332 aaPredicted RBP14.7□□□□□ -0.06
USP1-203ENST00000442679 MS4A4AQ96JQ5 239 aa14.7□□□□□ -0.06
USP1-203ENST00000442679 BEGAINQ9BUH8 593 aa14.7□□□□□ -0.06
USP1-203ENST00000442679 CABP5Q9NP86 173 aa14.7□□□□□ -0.06
USP1-203ENST00000442679 ZBTB21Q9ULJ3 1066 aa14.7□□□□□ -0.06
USP1-203ENST00000442679 AFG3L2Q9Y4W6 797 aa14.7□□□□□ -0.06
USP1-203ENST00000442679 SIPA1L1O43166 1804 aa14.7□□□□□ -0.06
USP1-203ENST00000442679 CCL15-CCL14A0A0B4J2E2 113 aa14.69□□□□□ -0.06
USP1-203ENST00000442679 MPHOSPH10O00566 681 aaKnown RBP14.69□□□□□ -0.06
USP1-203ENST00000442679 CXCL11O14625 94 aa14.69□□□□□ -0.06
USP1-203ENST00000442679 SLC3A2P08195 630 aaKnown RBP14.69□□□□□ -0.06
USP1-203ENST00000442679 CETPP11597 493 aa14.69□□□□□ -0.06
USP1-203ENST00000442679 PPARAQ07869 468 aa14.69□□□□□ -0.06
USP1-203ENST00000442679 CCL15Q16663 113 aa14.69□□□□□ -0.06
USP1-203ENST00000442679 IL25Q9H293 177 aa14.69□□□□□ -0.06
USP1-203ENST00000442679 MKNK2Q9HBH9 465 aa14.69□□□□□ -0.06
USP1-203ENST00000442679 KCNH4Q9UQ05 1017 aa14.69□□□□□ -0.06
USP1-203ENST00000442679 RAD50Q92878 1312 aa14.68□□□□□ -0.06
USP1-203ENST00000442679 THSD7BQ9C0I4 1608 aa14.68□□□□□ -0.06
USP1-203ENST00000442679 TESPA1A2RU30 521 aaPredicted RBP14.68□□□□□ -0.06
USP1-203ENST00000442679 TRIM75PA6NK02 468 aa14.68□□□□□ -0.06
USP1-203ENST00000442679 HSPA1AP0DMV8 641 aaKnown RBP14.68□□□□□ -0.06
USP1-203ENST00000442679 HSPA1BP0DMV9 641 aaKnown RBP14.68□□□□□ -0.06
USP1-203ENST00000442679 CACNB1Q02641 598 aaPredicted RBP14.68□□□□□ -0.06
USP1-203ENST00000442679 SPP2Q13103 211 aa14.68□□□□□ -0.06
USP1-203ENST00000442679 RAB3GAP1Q15042 981 aa14.68□□□□□ -0.06
USP1-203ENST00000442679 ZNF280CQ8ND82 737 aa14.68□□□□□ -0.06
USP1-203ENST00000442679 BRI3BPQ8WY22 251 aa14.68□□□□□ -0.06
USP1-203ENST00000442679 CCDC17Q96LX7 622 aa14.68□□□□□ -0.06
USP1-203ENST00000442679 TBC1D2Q9BYX2 928 aa14.68□□□□□ -0.06
USP1-203ENST00000442679 AS3MTQ9HBK9 375 aa14.68□□□□□ -0.06
USP1-203ENST00000442679 ZNF287Q9HBT7 754 aa14.68□□□□□ -0.06
USP1-203ENST00000442679 SGSM2O43147 1006 aa14.67□□□□□ -0.06
USP1-203ENST00000442679 TRPA1O75762 1119 aa14.67□□□□□ -0.06
USP1-203ENST00000442679 AKR1B1P15121 316 aa14.67□□□□□ -0.06
USP1-203ENST00000442679 CTDSPL2Q05D32 466 aa14.67□□□□□ -0.06
USP1-203ENST00000442679 PDE4BQ07343 736 aa14.67□□□□□ -0.06
USP1-203ENST00000442679 OTUD7BQ6GQQ9 843 aa14.67□□□□□ -0.06
USP1-203ENST00000442679 IFNL1Q8IU54 200 aa14.67□□□□□ -0.06
USP1-203ENST00000442679 PTPN18Q99952 460 aa14.67□□□□□ -0.06
USP1-203ENST00000442679 WDR18Q9BV38 432 aa14.67□□□□□ -0.06
USP1-203ENST00000442679 DSCC1Q9BVC3 393 aa14.67□□□□□ -0.06
USP1-203ENST00000442679 RNF186Q9NXI6 227 aa14.67□□□□□ -0.06
USP1-203ENST00000442679 ANAPC4Q9UJX5 808 aa14.67□□□□□ -0.06
USP1-203ENST00000442679 ROBO3Q96MS0 1386 aa14.67□□□□□ -0.06
USP1-203ENST00000442679 ZMYM6O95789 1325 aa14.66□□□□□ -0.06
USP1-203ENST00000442679 BAZ2AQ9UIF9 1905 aaKnown RBP14.66□□□□□ -0.06
USP1-203ENST00000442679 A0A0G2JLL6 359 aaPredicted RBP14.66□□□□□ -0.06
USP1-203ENST00000442679 IGF2BP3O00425 579 aaKnown RBP eCLIP14.66□□□□□ -0.06
USP1-203ENST00000442679 CA12O43570 354 aa14.66□□□□□ -0.06
USP1-203ENST00000442679 PRDM1O75626 825 aa14.66□□□□□ -0.06
USP1-203ENST00000442679 GUCY1A2P33402 732 aa14.66□□□□□ -0.06
USP1-203ENST00000442679 SEPT2Q15019 361 aa14.66□□□□□ -0.06
USP1-203ENST00000442679 TMEM179Q6ZVK1 233 aa14.66□□□□□ -0.06
USP1-203ENST00000442679 PRRT2Q7Z6L0 340 aaPredicted RBP14.66□□□□□ -0.06
USP1-203ENST00000442679 ZNF444Q8N0Y2 327 aaPredicted RBP14.66□□□□□ -0.06
USP1-203ENST00000442679 ZNF213O14771 459 aa14.65□□□□□ -0.06
USP1-203ENST00000442679 FOXN1O15353 648 aa14.65□□□□□ -0.06
USP1-203ENST00000442679 CDC45O75419 566 aa14.65□□□□□ -0.06
USP1-203ENST00000442679 ALDH1A1P00352 501 aa14.65□□□□□ -0.06
USP1-203ENST00000442679 RASA1P20936 1047 aa14.65□□□□□ -0.06
USP1-203ENST00000442679 HAND2P61296 217 aa14.65□□□□□ -0.06
USP1-203ENST00000442679 MOGSQ13724 837 aa14.65□□□□□ -0.06
USP1-203ENST00000442679 CASC1Q6TDU7 716 aa14.65□□□□□ -0.06
USP1-203ENST00000442679 GADL1Q6ZQY3 521 aa14.65□□□□□ -0.06
USP1-203ENST00000442679 FASTKD5Q7L8L6 764 aaKnown RBP14.65□□□□□ -0.06
USP1-203ENST00000442679 ESYT1Q9BSJ8 1104 aa14.65□□□□□ -0.06
USP1-203ENST00000442679 INCENPQ9NQS7 918 aa14.65□□□□□ -0.06
USP1-203ENST00000442679 SAGE1Q9NXZ1 904 aa14.65□□□□□ -0.06
USP1-203ENST00000442679 CTNNA3Q9UI47 895 aa14.65□□□□□ -0.06
USP1-203ENST00000442679 DOCK1Q14185 1865 aa14.65□□□□□ -0.06
USP1-203ENST00000442679 BTBD19C9JJ37 291 aa14.64□□□□□ -0.07
USP1-203ENST00000442679 USP17L10C9JJH3 530 aa14.64□□□□□ -0.07
USP1-203ENST00000442679 BACE1P56817 501 aa14.64□□□□□ -0.07
USP1-203ENST00000442679 PTH1RQ03431 593 aa14.64□□□□□ -0.07
USP1-203ENST00000442679 KIAA1211Q6ZU35 1233 aa14.64□□□□□ -0.07
USP1-203ENST00000442679 FAM43AQ8N2R8 423 aa14.64□□□□□ -0.07
USP1-203ENST00000442679 TSKSQ9UJT2 592 aa14.64□□□□□ -0.07
USP1-203ENST00000442679 C19orf81C9J6K1 198 aa14.63□□□□□ -0.07
USP1-203ENST00000442679 TBC1D8O95759 1140 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms