RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 FAM178BQ8IXR5 827 aa4.73□□□□□ -1.65
HMGB1P27-201ENST00000431429 SVOPQ8N4V2 548 aa4.73□□□□□ -1.65
HMGB1P27-201ENST00000431429 ST13P5Q8NFI4 369 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P27-201ENST00000431429 TMEM87BQ96K49 555 aa4.73□□□□□ -1.65
HMGB1P27-201ENST00000431429 ATXN3LQ9H3M9 355 aa4.73□□□□□ -1.65
HMGB1P27-201ENST00000431429 PHAXQ9H814 394 aaKnown RBP4.73□□□□□ -1.65
HMGB1P27-201ENST00000431429 KANSL2Q9H9L4 492 aa4.73□□□□□ -1.65
HMGB1P27-201ENST00000431429 R3HCC1Q9Y3T6 440 aaKnown RBP4.73□□□□□ -1.65
HMGB1P27-201ENST00000431429 CSADQ9Y600 493 aa4.73□□□□□ -1.65
HMGB1P27-201ENST00000431429 RGS13O14921 159 aa4.72□□□□□ -1.65
HMGB1P27-201ENST00000431429 UBOX5O94941 541 aa4.72□□□□□ -1.65
HMGB1P27-201ENST00000431429 CST3P01034 146 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P27-201ENST00000431429 MLECQ14165 292 aa4.72□□□□□ -1.65
HMGB1P27-201ENST00000431429 TTLL4Q14679 1199 aa4.72□□□□□ -1.65
HMGB1P27-201ENST00000431429 ARSHQ5FYA8 562 aa4.72□□□□□ -1.65
HMGB1P27-201ENST00000431429 C6orf15Q6UXA7 325 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P27-201ENST00000431429 ACAD11Q709F0 780 aa4.72□□□□□ -1.65
HMGB1P27-201ENST00000431429 HID1Q8IV36 788 aa4.72□□□□□ -1.65
HMGB1P27-201ENST00000431429 NEDD1Q8NHV4 660 aa4.72□□□□□ -1.65
HMGB1P27-201ENST00000431429 ZNF507Q8TCN5 953 aa4.72□□□□□ -1.65
HMGB1P27-201ENST00000431429 PPP1R13LQ8WUF5 828 aa4.72□□□□□ -1.65
HMGB1P27-201ENST00000431429 ISL2Q96A47 359 aa4.72□□□□□ -1.65
HMGB1P27-201ENST00000431429 DNAJC7Q99615 494 aa4.72□□□□□ -1.65
HMGB1P27-201ENST00000431429 CYP4F12Q9HCS2 524 aa4.72□□□□□ -1.65
HMGB1P27-201ENST00000431429 ST7Q9NRC1 585 aa4.72□□□□□ -1.65
HMGB1P27-201ENST00000431429 TMEM260Q9NX78 707 aa4.72□□□□□ -1.65
HMGB1P27-201ENST00000431429 ZNF214Q9UL59 606 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P27-201ENST00000431429 MKL2Q9ULH7 1088 aa4.72□□□□□ -1.65
HMGB1P27-201ENST00000431429 ACTL7BQ9Y614 415 aa4.72□□□□□ -1.65
HMGB1P27-201ENST00000431429 SBNO2Q9Y2G9 1366 aa4.72□□□□□ -1.65
HMGB1P27-201ENST00000431429 SPDYE3A6NKU9 549 aa4.71□□□□□ -1.66
HMGB1P27-201ENST00000431429 FAM229AH3BQW9 127 aa4.71□□□□□ -1.66
HMGB1P27-201ENST00000431429 CAPNS1P04632 268 aa4.71□□□□□ -1.66
HMGB1P27-201ENST00000431429 POLR2BP30876 1174 aaKnown RBP4.71□□□□□ -1.66
HMGB1P27-201ENST00000431429 ETF1P62495 437 aaKnown RBP4.71□□□□□ -1.66
HMGB1P27-201ENST00000431429 SQSTM1Q13501 440 aa4.71□□□□□ -1.66
HMGB1P27-201ENST00000431429 NCAPHQ15003 741 aa4.71□□□□□ -1.66
HMGB1P27-201ENST00000431429 AKAP4Q5JQC9 854 aa4.71□□□□□ -1.66
HMGB1P27-201ENST00000431429 NUTM2GQ5VZR2 741 aa4.71□□□□□ -1.66
HMGB1P27-201ENST00000431429 LARP1BQ659C4 914 aaKnown RBP4.71□□□□□ -1.66
HMGB1P27-201ENST00000431429 ANKRD34AQ69YU3 496 aa4.71□□□□□ -1.66
HMGB1P27-201ENST00000431429 PPFIBP1Q86W92 1011 aa4.71□□□□□ -1.66
HMGB1P27-201ENST00000431429 TMEM192Q8IY95 271 aa4.71□□□□□ -1.66
HMGB1P27-201ENST00000431429 KCT2Q8NC54 265 aa4.71□□□□□ -1.66
HMGB1P27-201ENST00000431429 CYB5D2Q8WUJ1 264 aa4.71□□□□□ -1.66
HMGB1P27-201ENST00000431429 LENG1Q96BZ8 264 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P27-201ENST00000431429 VWCEQ96DN2 955 aa4.71□□□□□ -1.66
HMGB1P27-201ENST00000431429 PSMG3-AS1Q96PY0 264 aa4.71□□□□□ -1.66
HMGB1P27-201ENST00000431429 ACSS3Q9H6R3 686 aa4.71□□□□□ -1.66
HMGB1P27-201ENST00000431429 RRAGCQ9HB90 399 aa4.71□□□□□ -1.66
HMGB1P27-201ENST00000431429 RAD18Q9NS91 495 aa4.71□□□□□ -1.66
HMGB1P27-201ENST00000431429 FAM105AQ9NUU6 356 aa4.71□□□□□ -1.66
HMGB1P27-201ENST00000431429 SUSD2Q9UGT4 822 aa4.71□□□□□ -1.66
HMGB1P27-201ENST00000431429 ZMYM5Q9UJ78 669 aa4.71□□□□□ -1.66
HMGB1P27-201ENST00000431429 KRBA1A5PL33 1030 aa4.7□□□□□ -1.66
HMGB1P27-201ENST00000431429 PIK3R2O00459 728 aa4.7□□□□□ -1.66
HMGB1P27-201ENST00000431429 DRD2P14416 443 aa4.7□□□□□ -1.66
HMGB1P27-201ENST00000431429 COL8A1P27658 744 aa4.7□□□□□ -1.66
HMGB1P27-201ENST00000431429 PMS1P54277 932 aaKnown RBP4.7□□□□□ -1.66
HMGB1P27-201ENST00000431429 YARSP54577 528 aaKnown RBP4.7□□□□□ -1.66
HMGB1P27-201ENST00000431429 TRIM28Q13263 835 aaKnown RBP4.7□□□□□ -1.66
HMGB1P27-201ENST00000431429 PPP2R5EQ16537 467 aa4.7□□□□□ -1.66
HMGB1P27-201ENST00000431429 C2orf27AQ580R0 203 aa4.7□□□□□ -1.66
HMGB1P27-201ENST00000431429 VHLLQ6RSH7 139 aa4.7□□□□□ -1.66
HMGB1P27-201ENST00000431429 SHISA2Q6UWI4 295 aa4.7□□□□□ -1.66
HMGB1P27-201ENST00000431429 SEZ6L2Q6UXD5 910 aa4.7□□□□□ -1.66
HMGB1P27-201ENST00000431429 SPATC1Q76KD6 591 aa4.7□□□□□ -1.66
HMGB1P27-201ENST00000431429 KIAA0907Q7Z7F0 614 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P27-201ENST00000431429 ZNF513Q8N8E2 541 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P27-201ENST00000431429 FAM13CQ8NE31 585 aa4.7□□□□□ -1.66
HMGB1P27-201ENST00000431429 SH3TC2Q8TF17 1288 aa4.7□□□□□ -1.66
HMGB1P27-201ENST00000431429 EZH1Q92800 747 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P27-201ENST00000431429 FAM46AQ96IP4 442 aaKnown RBP4.7□□□□□ -1.66
HMGB1P27-201ENST00000431429 NOP53Q9NZM5 478 aaKnown RBP4.7□□□□□ -1.66
HMGB1P27-201ENST00000431429 KLHL3Q9UH77 587 aa4.7□□□□□ -1.66
HMGB1P27-201ENST00000431429 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P27-201ENST00000431429 ADCY3O60266 1144 aa4.69□□□□□ -1.66
HMGB1P27-201ENST00000431429 SUSD5O60279 629 aa4.69□□□□□ -1.66
HMGB1P27-201ENST00000431429 DIAPH1O60610 1272 aaKnown RBP4.69□□□□□ -1.66
HMGB1P27-201ENST00000431429 SPATA31C1P0DKV0 1188 aa4.69□□□□□ -1.66
HMGB1P27-201ENST00000431429 RAG1P15918 1043 aa4.69□□□□□ -1.66
HMGB1P27-201ENST00000431429 PREPP48147 710 aa4.69□□□□□ -1.66
HMGB1P27-201ENST00000431429 ZNF143P52747 638 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P27-201ENST00000431429 LONRF2Q1L5Z9 754 aa4.69□□□□□ -1.66
HMGB1P27-201ENST00000431429 SLC10A6Q3KNW5 377 aa4.69□□□□□ -1.66
HMGB1P27-201ENST00000431429 PRAMEF13Q5VWM6 474 aa4.69□□□□□ -1.66
HMGB1P27-201ENST00000431429 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P27-201ENST00000431429 AGGF1Q8N302 714 aaeCLIP4.69□□□□□ -1.66
HMGB1P27-201ENST00000431429 DNAJB8Q8NHS0 232 aa4.69□□□□□ -1.66
HMGB1P27-201ENST00000431429 THAP3Q8WTV1 239 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P27-201ENST00000431429 CCDC74BQ96LY2 380 aa4.69□□□□□ -1.66
HMGB1P27-201ENST00000431429 EPN3Q9H201 632 aa4.69□□□□□ -1.66
HMGB1P27-201ENST00000431429 SUCOQ9UBS9 1254 aaKnown RBP4.69□□□□□ -1.66
HMGB1P27-201ENST00000431429 AP4E1Q9UPM8 1137 aa4.69□□□□□ -1.66
HMGB1P27-201ENST00000431429 CBFA2T2O43439 604 aa4.68□□□□□ -1.66
HMGB1P27-201ENST00000431429 DDAH1O94760 285 aa4.68□□□□□ -1.66
HMGB1P27-201ENST00000431429 LRIG2O94898 1065 aa4.68□□□□□ -1.66
HMGB1P27-201ENST00000431429 HCLS1P14317 486 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P27-201ENST00000431429 SLC7A5Q01650 507 aa4.68□□□□□ -1.66
HMGB1P27-201ENST00000431429 IFRD2Q12894 506 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms