RNA–Protein interactions for RNA: ENST00000416842.1

AP001042.1-201, humanhuman

TSL 3 BASIC

Gene AP001042.1, Length 487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001042.1-201ENST00000416842 CIZ1Q9ULV3 898 aaPredicted RBP9.56□□□□□ -0.88
AP001042.1-201ENST00000416842 JAG2Q9Y219 1238 aa9.56□□□□□ -0.88
AP001042.1-201ENST00000416842 ECM29Q5VYK3 1845 aa9.56□□□□□ -0.88
AP001042.1-201ENST00000416842 USP17L3A6NCW0 530 aa9.55□□□□□ -0.88
AP001042.1-201ENST00000416842 USP17L4A6NCW7 530 aa9.55□□□□□ -0.88
AP001042.1-201ENST00000416842 BAG3O95817 575 aa9.55□□□□□ -0.88
AP001042.1-201ENST00000416842 USP17L8P0C7I0 530 aa9.55□□□□□ -0.88
AP001042.1-201ENST00000416842 PCP11498 1178 aaKnown RBP9.55□□□□□ -0.88
AP001042.1-201ENST00000416842 NT5C2P49902 561 aa9.55□□□□□ -0.88
AP001042.1-201ENST00000416842 ANTXR2P58335 489 aa9.55□□□□□ -0.88
AP001042.1-201ENST00000416842 ST3GAL1Q11201 340 aa9.55□□□□□ -0.88
AP001042.1-201ENST00000416842 DIXDC1Q155Q3 683 aa9.55□□□□□ -0.88
AP001042.1-201ENST00000416842 NBPF9Q3BBW0 867 aa9.55□□□□□ -0.88
AP001042.1-201ENST00000416842 AKNAD1Q5T1N1 836 aa9.55□□□□□ -0.88
AP001042.1-201ENST00000416842 SPRYD7Q5W111 196 aa9.55□□□□□ -0.88
AP001042.1-201ENST00000416842 APOBEC3HQ6NTF7 200 aaKnown RBP9.55□□□□□ -0.88
AP001042.1-201ENST00000416842 USP17L1Q7RTZ2 530 aa9.55□□□□□ -0.88
AP001042.1-201ENST00000416842 DZIP1Q86YF9 867 aaKnown RBP9.55□□□□□ -0.88
AP001042.1-201ENST00000416842 IGDCC4Q8TDY8 1250 aa9.55□□□□□ -0.88
AP001042.1-201ENST00000416842 ARMC5Q96C12 935 aa9.55□□□□□ -0.88
AP001042.1-201ENST00000416842 CRNKL1Q9BZJ0 848 aaKnown RBP9.55□□□□□ -0.88
AP001042.1-201ENST00000416842 SH2B1Q9NRF2 756 aaPredicted RBP9.55□□□□□ -0.88
AP001042.1-201ENST00000416842 PTPN22Q9Y2R2 807 aa9.55□□□□□ -0.88
AP001042.1-201ENST00000416842 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.55□□□□□ -0.88
AP001042.1-201ENST00000416842 DAGLAQ9Y4D2 1042 aa9.55□□□□□ -0.88
AP001042.1-201ENST00000416842 CENPFP49454 3210 aa9.54□□□□□ -0.88
AP001042.1-201ENST00000416842 C19orf67A6NJJ6 358 aa9.54□□□□□ -0.88
AP001042.1-201ENST00000416842 G3V3G9 751 aa9.54□□□□□ -0.88
AP001042.1-201ENST00000416842 ALDH1A1P00352 501 aa9.54□□□□□ -0.88
AP001042.1-201ENST00000416842 APPP05067 770 aa9.54□□□□□ -0.88
AP001042.1-201ENST00000416842 PLCG2P16885 1265 aa9.54□□□□□ -0.88
AP001042.1-201ENST00000416842 MMP14P50281 582 aa9.54□□□□□ -0.88
AP001042.1-201ENST00000416842 CAP1Q01518 475 aa9.54□□□□□ -0.88
AP001042.1-201ENST00000416842 ME3Q16798 604 aa9.54□□□□□ -0.88
AP001042.1-201ENST00000416842 DCAF8Q5TAQ9 597 aa9.54□□□□□ -0.88
AP001042.1-201ENST00000416842 C12orf60Q5U649 245 aa9.54□□□□□ -0.88
AP001042.1-201ENST00000416842 NCOA7Q8NI08 942 aa9.54□□□□□ -0.88
AP001042.1-201ENST00000416842 SH3RF3Q8TEJ3 882 aaPredicted RBP9.54□□□□□ -0.88
AP001042.1-201ENST00000416842 SDR42E1Q8WUS8 393 aa9.54□□□□□ -0.88
AP001042.1-201ENST00000416842 OTUD5Q96G74 571 aa9.54□□□□□ -0.88
AP001042.1-201ENST00000416842 ZNF274Q96GC6 653 aaPredicted RBP9.54□□□□□ -0.88
AP001042.1-201ENST00000416842 ZDHHC15Q96MV8 337 aa9.54□□□□□ -0.88
AP001042.1-201ENST00000416842 MXD3Q9BW11 206 aa9.54□□□□□ -0.88
AP001042.1-201ENST00000416842 NAPBQ9H115 298 aa9.54□□□□□ -0.88
AP001042.1-201ENST00000416842 AATFQ9NY61 560 aaKnown RBP eCLIP9.54□□□□□ -0.88
AP001042.1-201ENST00000416842 DAXXQ9UER7 740 aaPredicted RBP9.54□□□□□ -0.88
AP001042.1-201ENST00000416842 BRCA2P51587 3418 aa9.54□□□□□ -0.88
AP001042.1-201ENST00000416842 SZT2Q5T011 3432 aa9.54□□□□□ -0.88
AP001042.1-201ENST00000416842 ZSWIM8A7E2V4 1837 aa9.54□□□□□ -0.88
AP001042.1-201ENST00000416842 OTOFQ9HC10 1997 aa9.54□□□□□ -0.88
AP001042.1-201ENST00000416842 USP17L12C9JPN9 530 aa9.53□□□□□ -0.88
AP001042.1-201ENST00000416842 USP17L21D6R901 530 aa9.53□□□□□ -0.88
AP001042.1-201ENST00000416842 H0YGN5 161 aa9.53□□□□□ -0.88
AP001042.1-201ENST00000416842 SMIM22K7EJ46 135 aa9.53□□□□□ -0.88
AP001042.1-201ENST00000416842 IGF2BP3O00425 579 aaKnown RBP eCLIP9.53□□□□□ -0.88
AP001042.1-201ENST00000416842 ORC4O43929 436 aa9.53□□□□□ -0.88
AP001042.1-201ENST00000416842 LARGE1O95461 756 aa9.53□□□□□ -0.88
AP001042.1-201ENST00000416842 MCM5P33992 734 aa9.53□□□□□ -0.88
AP001042.1-201ENST00000416842 NF2P35240 595 aa9.53□□□□□ -0.88
AP001042.1-201ENST00000416842 HAND2P61296 217 aa9.53□□□□□ -0.88
AP001042.1-201ENST00000416842 PPARAQ07869 468 aa9.53□□□□□ -0.88
AP001042.1-201ENST00000416842 PRKG1Q13976 671 aa9.53□□□□□ -0.88
AP001042.1-201ENST00000416842 LDLRAD1Q5T700 205 aa9.53□□□□□ -0.88
AP001042.1-201ENST00000416842 CLEC17AQ6ZS10 378 aa9.53□□□□□ -0.88
AP001042.1-201ENST00000416842 Q6ZUG5 572 aa9.53□□□□□ -0.88
AP001042.1-201ENST00000416842 CYB5R4Q7L1T6 521 aa9.53□□□□□ -0.88
AP001042.1-201ENST00000416842 ARMC9Q7Z3E5 817 aa9.53□□□□□ -0.88
AP001042.1-201ENST00000416842 IFNL1Q8IU54 200 aa9.53□□□□□ -0.88
AP001042.1-201ENST00000416842 MTMR14Q8NCE2 650 aa9.53□□□□□ -0.88
AP001042.1-201ENST00000416842 SPDYE1Q8NFV5 336 aaPredicted RBP9.53□□□□□ -0.88
AP001042.1-201ENST00000416842 CD99L2Q8TCZ2 262 aa9.53□□□□□ -0.88
AP001042.1-201ENST00000416842 ERO1AQ96HE7 468 aa9.53□□□□□ -0.88
AP001042.1-201ENST00000416842 ZBED3Q96IU2 234 aaPredicted RBP9.53□□□□□ -0.88
AP001042.1-201ENST00000416842 CNNM2Q9H8M5 875 aa9.53□□□□□ -0.88
AP001042.1-201ENST00000416842 INCENPQ9NQS7 918 aa9.53□□□□□ -0.88
AP001042.1-201ENST00000416842 ZSWIM5Q9P217 1185 aa9.53□□□□□ -0.88
AP001042.1-201ENST00000416842 SERPINA10Q9UK55 444 aa9.53□□□□□ -0.88
AP001042.1-201ENST00000416842 CUL9Q8IWT3 2517 aa9.52□□□□□ -0.88
AP001042.1-201ENST00000416842 MANSC4A6NHS7 340 aaPredicted RBP9.52□□□□□ -0.89
AP001042.1-201ENST00000416842 PFKFB2O60825 505 aa9.52□□□□□ -0.89
AP001042.1-201ENST00000416842 WDHD1O75717 1129 aaPredicted RBP9.52□□□□□ -0.89
AP001042.1-201ENST00000416842 LIFRP42702 1097 aa9.52□□□□□ -0.89
AP001042.1-201ENST00000416842 BTDP43251 543 aa9.52□□□□□ -0.89
AP001042.1-201ENST00000416842 CTDSPL2Q05D32 466 aa9.52□□□□□ -0.89
AP001042.1-201ENST00000416842 LHX8Q68G74 356 aa9.52□□□□□ -0.89
AP001042.1-201ENST00000416842 MFSD6Q6ZSS7 791 aa9.52□□□□□ -0.89
AP001042.1-201ENST00000416842 SGMS1Q86VZ5 419 aa9.52□□□□□ -0.89
AP001042.1-201ENST00000416842 METTL16Q86W50 562 aaKnown RBP9.52□□□□□ -0.89
AP001042.1-201ENST00000416842 ANKS1AQ92625 1134 aa9.52□□□□□ -0.89
AP001042.1-201ENST00000416842 IDI2Q9BXS1 227 aa9.52□□□□□ -0.89
AP001042.1-201ENST00000416842 KRT23Q9C075 422 aa9.52□□□□□ -0.89
AP001042.1-201ENST00000416842 RNF41Q9H4P4 317 aaPredicted RBP9.52□□□□□ -0.89
AP001042.1-201ENST00000416842 CHMP5Q9NZZ3 219 aa9.52□□□□□ -0.89
AP001042.1-201ENST00000416842 TAOK2Q9UL54 1235 aa9.52□□□□□ -0.89
AP001042.1-201ENST00000416842 TTF2Q9UNY4 1162 aaKnown RBP9.52□□□□□ -0.89
AP001042.1-201ENST00000416842 FZD1Q9UP38 647 aa9.52□□□□□ -0.89
AP001042.1-201ENST00000416842 NEDD4P46934 1319 aa9.52□□□□□ -0.89
AP001042.1-201ENST00000416842 ROBO3Q96MS0 1386 aa9.51□□□□□ -0.89
AP001042.1-201ENST00000416842 MAST2Q6P0Q8 1798 aa9.51□□□□□ -0.89
AP001042.1-201ENST00000416842 WNT10BO00744 389 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms