RNA–Protein interactions for RNA: ENST00000414008.3

HCG27-202, Transcript of HLA complex group 27, humanhuman

TSL 4

Gene HCG27, Length 829 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-202ENST00000414008 RNF135Q8IUD6 432 aa11.9□□□□□ -0.5
HCG27-202ENST00000414008 C16orf71Q8IYS4 520 aaPredicted RBP11.9□□□□□ -0.5
HCG27-202ENST00000414008 VGLL2Q8N8G2 317 aa11.9□□□□□ -0.5
HCG27-202ENST00000414008 SSH3Q8TE77 659 aa11.9□□□□□ -0.5
HCG27-202ENST00000414008 KCNQ5Q9NR82 932 aa11.9□□□□□ -0.5
HCG27-202ENST00000414008 SPEF2Q9C093 1822 aa11.9□□□□□ -0.5
HCG27-202ENST00000414008 IRS2Q9Y4H2 1338 aa11.89□□□□□ -0.51
HCG27-202ENST00000414008 PSMD14O00487 310 aa11.89□□□□□ -0.51
HCG27-202ENST00000414008 LMOD1P29536 600 aaPredicted RBP11.89□□□□□ -0.51
HCG27-202ENST00000414008 ADD1P35611 737 aaKnown RBP11.89□□□□□ -0.51
HCG27-202ENST00000414008 ERVK-9P63128 1117 aa11.89□□□□□ -0.51
HCG27-202ENST00000414008 RELBQ01201 579 aa11.89□□□□□ -0.51
HCG27-202ENST00000414008 G3BP1Q13283 466 aaKnown RBP eCLIP11.89□□□□□ -0.51
HCG27-202ENST00000414008 PUM3Q15397 648 aaKnown RBP11.89□□□□□ -0.51
HCG27-202ENST00000414008 ZNF804AQ7Z570 1209 aa11.89□□□□□ -0.51
HCG27-202ENST00000414008 CD209Q9NNX6 404 aa11.89□□□□□ -0.51
HCG27-202ENST00000414008 HACL1Q9UJ83 578 aa11.89□□□□□ -0.51
HCG27-202ENST00000414008 USP17L3A6NCW0 530 aa11.88□□□□□ -0.51
HCG27-202ENST00000414008 USP17L4A6NCW7 530 aa11.88□□□□□ -0.51
HCG27-202ENST00000414008 VIL1P09327 827 aaKnown RBP11.88□□□□□ -0.51
HCG27-202ENST00000414008 IFIT1P09914 478 aaKnown RBP11.88□□□□□ -0.51
HCG27-202ENST00000414008 FGFR2P21802 821 aa11.88□□□□□ -0.51
HCG27-202ENST00000414008 HIBADHP31937 336 aaKnown RBP11.88□□□□□ -0.51
HCG27-202ENST00000414008 GMPSP49915 693 aaPredicted RBP11.88□□□□□ -0.51
HCG27-202ENST00000414008 USP17L1Q7RTZ2 530 aa11.88□□□□□ -0.51
HCG27-202ENST00000414008 RPAP2Q8IXW5 612 aaPredicted RBP11.88□□□□□ -0.51
HCG27-202ENST00000414008 LPIN2Q92539 896 aa11.88□□□□□ -0.51
HCG27-202ENST00000414008 AGBL1Q96MI9 1066 aa11.88□□□□□ -0.51
HCG27-202ENST00000414008 SPINT1O43278 529 aa11.87□□□□□ -0.51
HCG27-202ENST00000414008 SURF6O75683 361 aaKnown RBP11.87□□□□□ -0.51
HCG27-202ENST00000414008 TOMM70O94826 608 aa11.87□□□□□ -0.51
HCG27-202ENST00000414008 SLC5A1P13866 664 aa11.87□□□□□ -0.51
HCG27-202ENST00000414008 EPHX2P34913 555 aa11.87□□□□□ -0.51
HCG27-202ENST00000414008 GYG1P46976 350 aa11.87□□□□□ -0.51
HCG27-202ENST00000414008 SCNN1DP51172 638 aa11.87□□□□□ -0.51
HCG27-202ENST00000414008 CAVIN4Q5BKX8 364 aa11.87□□□□□ -0.51
HCG27-202ENST00000414008 STRIP1Q5VSL9 837 aa11.87□□□□□ -0.51
HCG27-202ENST00000414008 DPF2Q92785 391 aa11.87□□□□□ -0.51
HCG27-202ENST00000414008 FAM84BQ96KN1 310 aaPredicted RBP11.87□□□□□ -0.51
HCG27-202ENST00000414008 TAF1DQ9H5J8 278 aaPredicted RBP11.87□□□□□ -0.51
HCG27-202ENST00000414008 GPRC5DQ9NZD1 345 aa11.87□□□□□ -0.51
HCG27-202ENST00000414008 WDR90Q96KV7 1748 aa11.86□□□□□ -0.51
HCG27-202ENST00000414008 MAN1A2O60476 641 aa11.86□□□□□ -0.51
HCG27-202ENST00000414008 HMMRO75330 724 aa11.86□□□□□ -0.51
HCG27-202ENST00000414008 MYCP01106 439 aaPredicted RBP11.86□□□□□ -0.51
HCG27-202ENST00000414008 IL1R1P14778 569 aa11.86□□□□□ -0.51
HCG27-202ENST00000414008 RPS12P25398 132 aaKnown RBP11.86□□□□□ -0.51
HCG27-202ENST00000414008 EPS15P42566 896 aa11.86□□□□□ -0.51
HCG27-202ENST00000414008 TFCP2Q12800 502 aa11.86□□□□□ -0.51
HCG27-202ENST00000414008 OS9Q13438 667 aaPredicted RBP11.86□□□□□ -0.51
HCG27-202ENST00000414008 ATP2B3Q16720 1220 aa11.86□□□□□ -0.51
HCG27-202ENST00000414008 TTLL5Q6EMB2 1281 aa11.86□□□□□ -0.51
HCG27-202ENST00000414008 FBXO33Q7Z6M2 555 aa11.86□□□□□ -0.51
HCG27-202ENST00000414008 VPS37DQ86XT2 251 aa11.86□□□□□ -0.51
HCG27-202ENST00000414008 PHTF2Q8N3S3 785 aa11.86□□□□□ -0.51
HCG27-202ENST00000414008 CNOT7Q9UIV1 285 aaKnown RBP11.86□□□□□ -0.51
HCG27-202ENST00000414008 DOLKQ9UPQ8 538 aa11.86□□□□□ -0.51
HCG27-202ENST00000414008 AKAP2Q9Y2D5 859 aa11.86□□□□□ -0.51
HCG27-202ENST00000414008 NOP58Q9Y2X3 529 aaKnown RBP11.86□□□□□ -0.51
HCG27-202ENST00000414008 SUPT16HQ9Y5B9 1047 aaKnown RBP11.86□□□□□ -0.51
HCG27-202ENST00000414008 A6NJR5 290 aa11.85□□□□□ -0.51
HCG27-202ENST00000414008 H7C1D1 291 aa11.85□□□□□ -0.51
HCG27-202ENST00000414008 SASH1O94885 1247 aa11.85□□□□□ -0.51
HCG27-202ENST00000414008 PTGIRP43119 386 aa11.85□□□□□ -0.51
HCG27-202ENST00000414008 GTF2IP78347 998 aa11.85□□□□□ -0.51
HCG27-202ENST00000414008 EAPPQ56P03 285 aaPredicted RBP11.85□□□□□ -0.51
HCG27-202ENST00000414008 DACT2Q5SW24 774 aa11.85□□□□□ -0.51
HCG27-202ENST00000414008 PNMA8AQ86V59 439 aaPredicted RBP11.85□□□□□ -0.51
HCG27-202ENST00000414008 AGBL3Q8NEM8 1001 aa11.85□□□□□ -0.51
HCG27-202ENST00000414008 TDRD7Q8NHU6 1098 aaKnown RBP11.85□□□□□ -0.51
HCG27-202ENST00000414008 CRBNQ96SW2 442 aa11.85□□□□□ -0.51
HCG27-202ENST00000414008 ALG2Q9H553 416 aa11.85□□□□□ -0.51
HCG27-202ENST00000414008 TTLL8A6PVC2 850 aa11.84□□□□□ -0.51
HCG27-202ENST00000414008 TIMM10P62072 90 aa11.84□□□□□ -0.51
HCG27-202ENST00000414008 USP4Q13107 963 aa11.84□□□□□ -0.51
HCG27-202ENST00000414008 CYP2U1Q7Z449 544 aa11.84□□□□□ -0.51
HCG27-202ENST00000414008 SIRT2Q8IXJ6 389 aa11.84□□□□□ -0.51
HCG27-202ENST00000414008 ZNF395Q9H8N7 513 aaPredicted RBP11.84□□□□□ -0.51
HCG27-202ENST00000414008 ADARB2Q9NS39 739 aaKnown RBP11.84□□□□□ -0.51
HCG27-202ENST00000414008 MYO3BQ8WXR4 1341 aa11.84□□□□□ -0.51
HCG27-202ENST00000414008 A0A1B0GUL7 405 aa11.83□□□□□ -0.52
HCG27-202ENST00000414008 SHTN1A0MZ66 631 aa11.83□□□□□ -0.52
HCG27-202ENST00000414008 FRAT2O75474 233 aaPredicted RBP11.83□□□□□ -0.52
HCG27-202ENST00000414008 SCTRP47872 440 aa11.83□□□□□ -0.52
HCG27-202ENST00000414008 C1QTNF8P60827 252 aa11.83□□□□□ -0.52
HCG27-202ENST00000414008 MAP7D1Q3KQU3 841 aa11.83□□□□□ -0.52
HCG27-202ENST00000414008 HSP90AB4PQ58FF6 505 aa11.83□□□□□ -0.52
HCG27-202ENST00000414008 USP50Q70EL3 339 aaPredicted RBP11.83□□□□□ -0.52
HCG27-202ENST00000414008 LDHDQ86WU2 507 aa11.83□□□□□ -0.52
HCG27-202ENST00000414008 HOMEZQ8IX15 550 aa11.83□□□□□ -0.52
HCG27-202ENST00000414008 SMC1BQ8NDV3 1235 aa11.83□□□□□ -0.52
HCG27-202ENST00000414008 ZNF775Q96BV0 537 aaPredicted RBP11.83□□□□□ -0.52
HCG27-202ENST00000414008 NEUROD6Q96NK8 337 aa11.83□□□□□ -0.52
HCG27-202ENST00000414008 GMLQ99445 158 aa11.83□□□□□ -0.52
HCG27-202ENST00000414008 MXD3Q9BW11 206 aa11.83□□□□□ -0.52
HCG27-202ENST00000414008 EXOC6BQ9Y2D4 811 aa11.83□□□□□ -0.52
HCG27-202ENST00000414008 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.83□□□□□ -0.52
HCG27-202ENST00000414008 FAM205AQ6ZU69 1335 aa11.83□□□□□ -0.52
HCG27-202ENST00000414008 A0A1B0GUL6 1792 aa11.82□□□□□ -0.52
HCG27-202ENST00000414008 SCN9AQ15858 1988 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms