RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 ZMYM1Q5SVZ6 1142 aa15.14■□□□□ 0.01
SMARCB1-203ENST00000407082 ZNF512BQ96KM6 892 aaPredicted RBP15.14■□□□□ 0.01
SMARCB1-203ENST00000407082 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.14■□□□□ 0.01
SMARCB1-203ENST00000407082 HTTP42858 3142 aa15.14■□□□□ 0.01
SMARCB1-203ENST00000407082 FAM205AQ6ZU69 1335 aa15.14■□□□□ 0.01
SMARCB1-203ENST00000407082 CCL15-CCL14A0A0B4J2E2 113 aa15.13■□□□□ 0.01
SMARCB1-203ENST00000407082 SSC5DA1L4H1 1573 aa15.13■□□□□ 0.01
SMARCB1-203ENST00000407082 UNCXA6NJT0 531 aa15.13■□□□□ 0.01
SMARCB1-203ENST00000407082 GOLIM4O00461 696 aa15.13■□□□□ 0.01
SMARCB1-203ENST00000407082 ZBTB22O15209 634 aa15.13■□□□□ 0.01
SMARCB1-203ENST00000407082 MCAMP43121 646 aa15.13■□□□□ 0.01
SMARCB1-203ENST00000407082 FGD1P98174 961 aa15.13■□□□□ 0.01
SMARCB1-203ENST00000407082 RASA3Q14644 834 aa15.13■□□□□ 0.01
SMARCB1-203ENST00000407082 CCL15Q16663 113 aa15.13■□□□□ 0.01
SMARCB1-203ENST00000407082 FOXD4L5Q5VV16 416 aaPredicted RBP15.13■□□□□ 0.01
SMARCB1-203ENST00000407082 LARP1BQ659C4 914 aaKnown RBP15.13■□□□□ 0.01
SMARCB1-203ENST00000407082 SPATA5Q8NB90 893 aa15.13■□□□□ 0.01
SMARCB1-203ENST00000407082 WDR66Q8TBY9 1149 aa15.13■□□□□ 0.01
SMARCB1-203ENST00000407082 GPT2Q8TD30 523 aa15.13■□□□□ 0.01
SMARCB1-203ENST00000407082 FOXD4L4Q8WXT5 416 aaPredicted RBP15.13■□□□□ 0.01
SMARCB1-203ENST00000407082 PRMT6Q96LA8 375 aaPredicted RBP15.13■□□□□ 0.01
SMARCB1-203ENST00000407082 LLPHQ9BRT6 129 aaKnown RBP15.13■□□□□ 0.01
SMARCB1-203ENST00000407082 COL1A1P02452 1464 aaPredicted RBP15.13■□□□□ 0.01
SMARCB1-203ENST00000407082 TESPA1A2RU30 521 aaPredicted RBP15.12■□□□□ 0.01
SMARCB1-203ENST00000407082 WDHD1O75717 1129 aaPredicted RBP15.12■□□□□ 0.01
SMARCB1-203ENST00000407082 ME3Q16798 604 aa15.12■□□□□ 0.01
SMARCB1-203ENST00000407082 MFSD14BQ5SR56 506 aa15.12■□□□□ 0.01
SMARCB1-203ENST00000407082 PI16Q6UXB8 463 aa15.12■□□□□ 0.01
SMARCB1-203ENST00000407082 ZNF589Q86UQ0 364 aaPredicted RBP15.12■□□□□ 0.01
SMARCB1-203ENST00000407082 GAS2L3Q86XJ1 694 aa15.12■□□□□ 0.01
SMARCB1-203ENST00000407082 CERS5Q8N5B7 392 aa15.12■□□□□ 0.01
SMARCB1-203ENST00000407082 FAM184AQ8NB25 1140 aa15.12■□□□□ 0.01
SMARCB1-203ENST00000407082 TBC1D22AQ8WUA7 517 aa15.12■□□□□ 0.01
SMARCB1-203ENST00000407082 CNKSR2Q8WXI2 1034 aa15.12■□□□□ 0.01
SMARCB1-203ENST00000407082 BRI3BPQ8WY22 251 aa15.12■□□□□ 0.01
SMARCB1-203ENST00000407082 PPP1R9BQ96SB3 815 aa15.12■□□□□ 0.01
SMARCB1-203ENST00000407082 CENPFP49454 3210 aa15.11■□□□□ 0.01
SMARCB1-203ENST00000407082 FKBP1AP62942 108 aaKnown RBP15.11■□□□□ 0.01
SMARCB1-203ENST00000407082 HS1BP3Q53T59 392 aa15.11■□□□□ 0.01
SMARCB1-203ENST00000407082 CCDC183Q5T5S1 534 aa15.11■□□□□ 0.01
SMARCB1-203ENST00000407082 DHX32Q7L7V1 743 aaKnown RBP15.11■□□□□ 0.01
SMARCB1-203ENST00000407082 ARHGAP39Q9C0H5 1083 aa15.11■□□□□ 0.01
SMARCB1-203ENST00000407082 TPCN1Q9ULQ1 816 aa15.11■□□□□ 0.01
SMARCB1-203ENST00000407082 PDS5AQ29RF7 1337 aaKnown RBP15.11■□□□□ 0.01
SMARCB1-203ENST00000407082 SPDYE2BA6NHP3 402 aa15.1■□□□□ 0.01
SMARCB1-203ENST00000407082 SPDYE6P0CI01 402 aa15.1■□□□□ 0.01
SMARCB1-203ENST00000407082 ZAP70P43403 619 aa15.1■□□□□ 0.01
SMARCB1-203ENST00000407082 GTF2A2P52657 109 aa15.1■□□□□ 0.01
SMARCB1-203ENST00000407082 KRT85P78386 507 aa15.1■□□□□ 0.01
SMARCB1-203ENST00000407082 HMGN5P82970 282 aaKnown RBP15.1■□□□□ 0.01
SMARCB1-203ENST00000407082 UVSSAQ2YD98 709 aa15.1■□□□□ 0.01
SMARCB1-203ENST00000407082 MTMR14Q8NCE2 650 aa15.1■□□□□ 0.01
SMARCB1-203ENST00000407082 MS4A4AQ96JQ5 239 aa15.1■□□□□ 0.01
SMARCB1-203ENST00000407082 SCAND2PQ9GZW5 306 aaPredicted RBP15.1■□□□□ 0.01
SMARCB1-203ENST00000407082 TSPY26PQ9H489 355 aa15.1■□□□□ 0.01
SMARCB1-203ENST00000407082 ABCF2Q9UG63 623 aa15.1■□□□□ 0.01
SMARCB1-203ENST00000407082 MTMR6Q9Y217 621 aa15.1■□□□□ 0.01
SMARCB1-203ENST00000407082 NDUFB9Q9Y6M9 179 aa15.1■□□□□ 0.01
SMARCB1-203ENST00000407082 CPA1P15085 419 aa15.09■□□□□ 0.01
SMARCB1-203ENST00000407082 MTFR1Q15390 333 aa15.09■□□□□ 0.01
SMARCB1-203ENST00000407082 EDC3Q96F86 508 aaKnown RBP15.09■□□□□ 0.01
SMARCB1-203ENST00000407082 ZSCAN16Q9H4T2 348 aaPredicted RBP15.09■□□□□ 0.01
SMARCB1-203ENST00000407082 SALL1Q9NSC2 1324 aa15.09■□□□□ 0.01
SMARCB1-203ENST00000407082 TCHHQ07283 1943 aa15.09■□□□□ 0.01
SMARCB1-203ENST00000407082 MYH7P12883 1935 aa15.08■□□□□ 0
SMARCB1-203ENST00000407082 MYH13Q9UKX3 1938 aa15.08■□□□□ 0
SMARCB1-203ENST00000407082 VPS37CA5D8V6 355 aaPredicted RBP15.08■□□□□ 0
SMARCB1-203ENST00000407082 LDHBP07195 334 aaKnown RBP15.08■□□□□ 0
SMARCB1-203ENST00000407082 TOB2Q14106 344 aaPredicted RBP15.08■□□□□ 0
SMARCB1-203ENST00000407082 GRIK5Q16478 980 aa15.08■□□□□ 0
SMARCB1-203ENST00000407082 IMMTQ16891 758 aaKnown RBP15.08■□□□□ 0
SMARCB1-203ENST00000407082 SPTY2D1Q68D10 685 aaPredicted RBP15.08■□□□□ 0
SMARCB1-203ENST00000407082 Q6ZUG5 572 aa15.08■□□□□ 0
SMARCB1-203ENST00000407082 FBXL16Q8N461 479 aa15.08■□□□□ 0
SMARCB1-203ENST00000407082 APPBP2Q92624 585 aa15.08■□□□□ 0
SMARCB1-203ENST00000407082 HTATIP2Q9BUP3 242 aa15.08■□□□□ 0
SMARCB1-203ENST00000407082 PANK2Q9BZ23 570 aa15.08■□□□□ 0
SMARCB1-203ENST00000407082 TMEM63CQ9P1W3 806 aa15.08■□□□□ 0
SMARCB1-203ENST00000407082 BIN2Q9UBW5 565 aaPredicted RBP15.08■□□□□ 0
SMARCB1-203ENST00000407082 SUGT1Q9Y2Z0 365 aa15.08■□□□□ 0
SMARCB1-203ENST00000407082 NR2E3Q9Y5X4 410 aa15.08■□□□□ 0
SMARCB1-203ENST00000407082 CSADQ9Y600 493 aa15.08■□□□□ 0
SMARCB1-203ENST00000407082 ELP1O95163 1332 aa15.08■□□□□ 0
SMARCB1-203ENST00000407082 TCP10L2B9ZVM9 353 aa15.07■□□□□ 0
SMARCB1-203ENST00000407082 LARGE1O95461 756 aa15.07■□□□□ 0
SMARCB1-203ENST00000407082 CYP21A2P08686 494 aa15.07■□□□□ 0
SMARCB1-203ENST00000407082 HSPD1P10809 573 aaKnown RBP15.07■□□□□ 0
SMARCB1-203ENST00000407082 MAP3K9P80192 1104 aa15.07■□□□□ 0
SMARCB1-203ENST00000407082 LACTBP83111 547 aaPredicted RBP15.07■□□□□ 0
SMARCB1-203ENST00000407082 TNFAIP1Q13829 316 aa15.07■□□□□ 0
SMARCB1-203ENST00000407082 VGLL4Q14135 290 aa15.07■□□□□ 0
SMARCB1-203ENST00000407082 ATL3Q6DD88 541 aa15.07■□□□□ 0
SMARCB1-203ENST00000407082 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.07■□□□□ 0
SMARCB1-203ENST00000407082 RGS22Q8NE09 1264 aa15.07■□□□□ 0
SMARCB1-203ENST00000407082 GTF3C6Q969F1 213 aa15.07■□□□□ 0
SMARCB1-203ENST00000407082 TDRD3Q9H7E2 651 aaKnown RBP15.07■□□□□ 0
SMARCB1-203ENST00000407082 LRP2BPQ9P2M1 347 aa15.07■□□□□ 0
SMARCB1-203ENST00000407082 ZNF70Q9UC06 446 aaPredicted RBP15.07■□□□□ 0
SMARCB1-203ENST00000407082 TTF2Q9UNY4 1162 aaKnown RBP15.07■□□□□ 0
SMARCB1-203ENST00000407082 ZNF646O15015 1829 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms