RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 NOL9Q5SY16 702 aaKnown RBP12.13□□□□□ -0.47
NIFKP1-201ENST00000398317 SH3BP5LQ7L8J4 393 aa12.13□□□□□ -0.47
NIFKP1-201ENST00000398317 ANKRD23Q86SG2 305 aa12.13□□□□□ -0.47
NIFKP1-201ENST00000398317 ZSCAN29Q8IWY8 852 aaPredicted RBP12.13□□□□□ -0.47
NIFKP1-201ENST00000398317 NEUROD6Q96NK8 337 aa12.13□□□□□ -0.47
NIFKP1-201ENST00000398317 IDI2Q9BXS1 227 aa12.13□□□□□ -0.47
NIFKP1-201ENST00000398317 DDX4Q9NQI0 724 aaKnown RBP12.13□□□□□ -0.47
NIFKP1-201ENST00000398317 AKAP2Q9Y2D5 859 aa12.13□□□□□ -0.47
NIFKP1-201ENST00000398317 PTPRFP10586 1907 aa12.13□□□□□ -0.47
NIFKP1-201ENST00000398317 MGAMO43451 1857 aa12.12□□□□□ -0.47
NIFKP1-201ENST00000398317 DOCK3Q8IZD9 2030 aa12.12□□□□□ -0.47
NIFKP1-201ENST00000398317 DDTLA6NHG4 134 aaPredicted RBP12.12□□□□□ -0.47
NIFKP1-201ENST00000398317 PHF20L1A8MW92 1017 aa12.12□□□□□ -0.47
NIFKP1-201ENST00000398317 ENTPD3O75355 529 aa12.12□□□□□ -0.47
NIFKP1-201ENST00000398317 TRIM27P14373 513 aa12.12□□□□□ -0.47
NIFKP1-201ENST00000398317 BTDP43251 543 aa12.12□□□□□ -0.47
NIFKP1-201ENST00000398317 PSMC4P43686 418 aa12.12□□□□□ -0.47
NIFKP1-201ENST00000398317 PICALMQ13492 652 aa12.12□□□□□ -0.47
NIFKP1-201ENST00000398317 FRAT1Q92837 279 aaPredicted RBP12.12□□□□□ -0.47
NIFKP1-201ENST00000398317 CLUAP1Q96AJ1 413 aa12.12□□□□□ -0.47
NIFKP1-201ENST00000398317 PNMA3Q9UL41 463 aa12.12□□□□□ -0.47
NIFKP1-201ENST00000398317 ATRNL1Q5VV63 1379 aa12.12□□□□□ -0.47
NIFKP1-201ENST00000398317 ADGRA2Q96PE1 1338 aa12.11□□□□□ -0.47
NIFKP1-201ENST00000398317 PHIPQ8WWQ0 1821 aa12.11□□□□□ -0.47
NIFKP1-201ENST00000398317 RFX7Q2KHR2 1363 aa12.11□□□□□ -0.47
NIFKP1-201ENST00000398317 MECOMQ03112 1051 aa12.11□□□□□ -0.47
NIFKP1-201ENST00000398317 MTX1Q13505 466 aa12.11□□□□□ -0.47
NIFKP1-201ENST00000398317 MVPQ14764 893 aaKnown RBP12.11□□□□□ -0.47
NIFKP1-201ENST00000398317 SPTY2D1Q68D10 685 aaPredicted RBP12.11□□□□□ -0.47
NIFKP1-201ENST00000398317 GPAT2Q6NUI2 795 aa12.11□□□□□ -0.47
NIFKP1-201ENST00000398317 PI16Q6UXB8 463 aa12.11□□□□□ -0.47
NIFKP1-201ENST00000398317 TBC1D9Q6ZT07 1266 aa12.11□□□□□ -0.47
NIFKP1-201ENST00000398317 ERICH6Q7L0X2 663 aa12.11□□□□□ -0.47
NIFKP1-201ENST00000398317 PACS2Q86VP3 889 aa12.11□□□□□ -0.47
NIFKP1-201ENST00000398317 SLF2Q8IX21 1173 aa12.11□□□□□ -0.47
NIFKP1-201ENST00000398317 SCYL3Q8IZE3 742 aa12.11□□□□□ -0.47
NIFKP1-201ENST00000398317 ZNF384Q8TF68 577 aa12.11□□□□□ -0.47
NIFKP1-201ENST00000398317 TRIM47Q96LD4 638 aa12.11□□□□□ -0.47
NIFKP1-201ENST00000398317 PICK1Q9NRD5 415 aa12.11□□□□□ -0.47
NIFKP1-201ENST00000398317 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.11□□□□□ -0.47
NIFKP1-201ENST00000398317 ZHX2Q9Y6X8 837 aa12.11□□□□□ -0.47
NIFKP1-201ENST00000398317 MROH7-TTC4A0A0A0MT08 1334 aa12.11□□□□□ -0.47
NIFKP1-201ENST00000398317 PDS5AQ29RF7 1337 aaKnown RBP12.11□□□□□ -0.47
NIFKP1-201ENST00000398317 DOCK1Q14185 1865 aa12.1□□□□□ -0.47
NIFKP1-201ENST00000398317 PNMA6EA0A0J9YXQ4 647 aa12.1□□□□□ -0.47
NIFKP1-201ENST00000398317 CXCL11O14625 94 aa12.1□□□□□ -0.47
NIFKP1-201ENST00000398317 IPO8O15397 1037 aaKnown RBP12.1□□□□□ -0.47
NIFKP1-201ENST00000398317 FMNL1O95466 1100 aaPredicted RBP12.1□□□□□ -0.47
NIFKP1-201ENST00000398317 GNAI2P04899 355 aa12.1□□□□□ -0.47
NIFKP1-201ENST00000398317 CYP2C8P10632 490 aa12.1□□□□□ -0.47
NIFKP1-201ENST00000398317 PTPRAP18433 802 aa12.1□□□□□ -0.47
NIFKP1-201ENST00000398317 GORABQ5T7V8 394 aa12.1□□□□□ -0.47
NIFKP1-201ENST00000398317 ATF7IPQ6VMQ6 1270 aa12.1□□□□□ -0.47
NIFKP1-201ENST00000398317 WNT2BQ93097 391 aa12.1□□□□□ -0.47
NIFKP1-201ENST00000398317 HMG20BQ9P0W2 317 aa12.1□□□□□ -0.47
NIFKP1-201ENST00000398317 MYO5AQ9Y4I1 1855 aaKnown RBP12.1□□□□□ -0.47
NIFKP1-201ENST00000398317 GPR75-ASB3A0A0A6YYF3 556 aa12.09□□□□□ -0.47
NIFKP1-201ENST00000398317 A0A0G2JLL6 359 aaPredicted RBP12.09□□□□□ -0.47
NIFKP1-201ENST00000398317 GNRH1P01148 92 aa12.09□□□□□ -0.47
NIFKP1-201ENST00000398317 RHBDL3P58872 404 aa12.09□□□□□ -0.47
NIFKP1-201ENST00000398317 MAP3K10Q02779 954 aa12.09□□□□□ -0.47
NIFKP1-201ENST00000398317 G3BP1Q13283 466 aaKnown RBP eCLIP12.09□□□□□ -0.47
NIFKP1-201ENST00000398317 MTFR1Q15390 333 aa12.09□□□□□ -0.47
NIFKP1-201ENST00000398317 GADL1Q6ZQY3 521 aa12.09□□□□□ -0.47
NIFKP1-201ENST00000398317 NUDT18Q6ZVK8 323 aa12.09□□□□□ -0.47
NIFKP1-201ENST00000398317 PRRT2Q7Z6L0 340 aaPredicted RBP12.09□□□□□ -0.47
NIFKP1-201ENST00000398317 CCDC84Q86UT8 332 aaPredicted RBP12.09□□□□□ -0.47
NIFKP1-201ENST00000398317 SPATA5Q8NB90 893 aa12.09□□□□□ -0.47
NIFKP1-201ENST00000398317 TATDN2Q93075 761 aa12.09□□□□□ -0.47
NIFKP1-201ENST00000398317 PARK7Q99497 189 aaKnown RBP12.09□□□□□ -0.47
NIFKP1-201ENST00000398317 SRRDQ9UH36 339 aa12.09□□□□□ -0.47
NIFKP1-201ENST00000398317 AFG3L2Q9Y4W6 797 aa12.09□□□□□ -0.47
NIFKP1-201ENST00000398317 FAM196BA6NMK8 535 aa12.08□□□□□ -0.48
NIFKP1-201ENST00000398317 CTNND1O60716 968 aaKnown RBP12.08□□□□□ -0.48
NIFKP1-201ENST00000398317 BCRP11274 1271 aa12.08□□□□□ -0.48
NIFKP1-201ENST00000398317 HOXD10P28358 340 aa12.08□□□□□ -0.48
NIFKP1-201ENST00000398317 MCAMP43121 646 aa12.08□□□□□ -0.48
NIFKP1-201ENST00000398317 PTPN5P54829 565 aa12.08□□□□□ -0.48
NIFKP1-201ENST00000398317 PRMT2P55345 433 aa12.08□□□□□ -0.48
NIFKP1-201ENST00000398317 FASTKD5Q7L8L6 764 aaKnown RBP12.08□□□□□ -0.48
NIFKP1-201ENST00000398317 TMEM57Q8N5G2 664 aa12.08□□□□□ -0.48
NIFKP1-201ENST00000398317 RAET1EQ8TD07 263 aa12.08□□□□□ -0.48
NIFKP1-201ENST00000398317 NSUN4Q96CB9 384 aaKnown RBP12.08□□□□□ -0.48
NIFKP1-201ENST00000398317 RAI14Q9P0K7 980 aa12.08□□□□□ -0.48
NIFKP1-201ENST00000398317 ATAD5Q96QE3 1844 aa12.08□□□□□ -0.48
NIFKP1-201ENST00000398317 MYPNQ86TC9 1320 aa12.08□□□□□ -0.48
NIFKP1-201ENST00000398317 TRIM75PA6NK02 468 aa12.07□□□□□ -0.48
NIFKP1-201ENST00000398317 GPR37O15354 613 aa12.07□□□□□ -0.48
NIFKP1-201ENST00000398317 LDHCP07864 332 aa12.07□□□□□ -0.48
NIFKP1-201ENST00000398317 FECHP22830 423 aa12.07□□□□□ -0.48
NIFKP1-201ENST00000398317 ARID4AP29374 1257 aaPredicted RBP12.07□□□□□ -0.48
NIFKP1-201ENST00000398317 GRK4P32298 578 aa12.07□□□□□ -0.48
NIFKP1-201ENST00000398317 PRKCZQ05513 592 aa12.07□□□□□ -0.48
NIFKP1-201ENST00000398317 GPIHBP1Q8IV16 184 aa12.07□□□□□ -0.48
NIFKP1-201ENST00000398317 GCC1Q96CN9 775 aa12.07□□□□□ -0.48
NIFKP1-201ENST00000398317 ZFRQ96KR1 1074 aaKnown RBP12.07□□□□□ -0.48
NIFKP1-201ENST00000398317 SNRKQ9NRH2 765 aa12.07□□□□□ -0.48
NIFKP1-201ENST00000398317 GABRQQ9UN88 632 aa12.07□□□□□ -0.48
NIFKP1-201ENST00000398317 CDK5RAP2Q96SN8 1893 aa12.06□□□□□ -0.48
NIFKP1-201ENST00000398317 FCGRTP55899 365 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms