RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 DNAJC18Q9H819 358 aa21.88■■□□□ 1.09
RPUSD3-201ENST00000383820 RBM27Q9P2N5 1060 aaKnown RBP21.88■■□□□ 1.09
RPUSD3-201ENST00000383820 MYO5AQ9Y4I1 1855 aaKnown RBP21.88■■□□□ 1.09
RPUSD3-201ENST00000383820 HLA-DOAP06340 250 aa21.87■■□□□ 1.09
RPUSD3-201ENST00000383820 TMED8Q6PL24 325 aaPredicted RBP21.87■■□□□ 1.09
RPUSD3-201ENST00000383820 FTSJ3Q8IY81 847 aaKnown RBP21.87■■□□□ 1.09
RPUSD3-201ENST00000383820 ANKLE1Q8NAG6 615 aa21.87■■□□□ 1.09
RPUSD3-201ENST00000383820 PALD1Q9ULE6 856 aa21.87■■□□□ 1.09
RPUSD3-201ENST00000383820 USP17L10C9JJH3 530 aa21.86■■□□□ 1.09
RPUSD3-201ENST00000383820 PIH1D3Q9NQM4 214 aaKnown RBP21.86■■□□□ 1.09
RPUSD3-201ENST00000383820 DBNLQ9UJU6 430 aaKnown RBP21.86■■□□□ 1.09
RPUSD3-201ENST00000383820 RPTORQ8N122 1335 aa21.85■■□□□ 1.09
RPUSD3-201ENST00000383820 EVI5O60447 810 aa21.85■■□□□ 1.09
RPUSD3-201ENST00000383820 JAG1P78504 1218 aa21.85■■□□□ 1.09
RPUSD3-201ENST00000383820 ZBTB21Q9ULJ3 1066 aa21.85■■□□□ 1.09
RPUSD3-201ENST00000383820 A0A1W2PPC1 479 aa21.84■■□□□ 1.09
RPUSD3-201ENST00000383820 CYP7A1P22680 504 aa21.84■■□□□ 1.09
RPUSD3-201ENST00000383820 HERVK_113P62684 666 aa21.84■■□□□ 1.09
RPUSD3-201ENST00000383820 NECAB2Q7Z6G3 386 aa21.84■■□□□ 1.09
RPUSD3-201ENST00000383820 ITPRIPQ8IWB1 547 aa21.84■■□□□ 1.09
RPUSD3-201ENST00000383820 GPRC5AQ8NFJ5 357 aa21.84■■□□□ 1.09
RPUSD3-201ENST00000383820 GTF3C2Q8WUA4 911 aaPredicted RBP21.84■■□□□ 1.09
RPUSD3-201ENST00000383820 P2RX7Q99572 595 aaKnown RBP21.84■■□□□ 1.09
RPUSD3-201ENST00000383820 C1orf115Q9H7X2 142 aa21.84■■□□□ 1.09
RPUSD3-201ENST00000383820 HMX1Q9NP08 348 aaPredicted RBP21.84■■□□□ 1.09
RPUSD3-201ENST00000383820 PLXNB2O15031 1838 aa21.84■■□□□ 1.09
RPUSD3-201ENST00000383820 GDF11O95390 407 aa21.83■■□□□ 1.09
RPUSD3-201ENST00000383820 SOCS4Q8WXH5 440 aa21.83■■□□□ 1.09
RPUSD3-201ENST00000383820 EAF2Q96CJ1 260 aaPredicted RBP21.83■■□□□ 1.09
RPUSD3-201ENST00000383820 PAWRQ96IZ0 340 aaKnown RBP21.83■■□□□ 1.09
RPUSD3-201ENST00000383820 CCDC8Q9H0W5 538 aaPredicted RBP21.83■■□□□ 1.09
RPUSD3-201ENST00000383820 IDH1O75874 414 aaKnown RBP21.82■■□□□ 1.08
RPUSD3-201ENST00000383820 XRCC5P13010 732 aaKnown RBP21.82■■□□□ 1.08
RPUSD3-201ENST00000383820 DYNLL1P63167 89 aaKnown RBP21.82■■□□□ 1.08
RPUSD3-201ENST00000383820 TRMT44Q8IYL2 757 aaKnown RBP21.82■■□□□ 1.08
RPUSD3-201ENST00000383820 NUDT12Q9BQG2 462 aa21.82■■□□□ 1.08
RPUSD3-201ENST00000383820 TLR7Q9NYK1 1049 aaKnown RBP21.82■■□□□ 1.08
RPUSD3-201ENST00000383820 SAP30BPQ9UHR5 308 aaKnown RBP21.82■■□□□ 1.08
RPUSD3-201ENST00000383820 MYH1P12882 1939 aa21.82■■□□□ 1.08
RPUSD3-201ENST00000383820 MAPK4P31152 587 aa21.81■■□□□ 1.08
RPUSD3-201ENST00000383820 TATDN1Q6P1N9 297 aa21.81■■□□□ 1.08
RPUSD3-201ENST00000383820 USP17L2Q6R6M4 530 aa21.81■■□□□ 1.08
RPUSD3-201ENST00000383820 EHD4Q9H223 541 aa21.81■■□□□ 1.08
RPUSD3-201ENST00000383820 TXNRD2Q9NNW7 524 aa21.81■■□□□ 1.08
RPUSD3-201ENST00000383820 RLBP1P12271 317 aa21.8■■□□□ 1.08
RPUSD3-201ENST00000383820 MAP3K12Q12852 859 aa21.8■■□□□ 1.08
RPUSD3-201ENST00000383820 SHROOM1Q2M3G4 852 aaPredicted RBP21.8■■□□□ 1.08
RPUSD3-201ENST00000383820 MAP3K21Q5TCX8 1036 aa21.8■■□□□ 1.08
RPUSD3-201ENST00000383820 ERC1Q8IUD2 1116 aa21.8■■□□□ 1.08
RPUSD3-201ENST00000383820 TRIB2Q92519 343 aa21.8■■□□□ 1.08
RPUSD3-201ENST00000383820 C12orf42Q96LP6 360 aa21.8■■□□□ 1.08
RPUSD3-201ENST00000383820 EMILIN3Q9NT22 766 aa21.8■■□□□ 1.08
RPUSD3-201ENST00000383820 RBPJLQ9UBG7 517 aa21.8■■□□□ 1.08
RPUSD3-201ENST00000383820 ALPK3Q96L96 1907 aa21.79■■□□□ 1.08
RPUSD3-201ENST00000383820 USP5P45974 858 aa21.79■■□□□ 1.08
RPUSD3-201ENST00000383820 ERVK-9P63128 1117 aa21.79■■□□□ 1.08
RPUSD3-201ENST00000383820 ERVK-24P63145 666 aa21.79■■□□□ 1.08
RPUSD3-201ENST00000383820 HNRNPUQ00839 825 aaKnown RBP eCLIP21.79■■□□□ 1.08
RPUSD3-201ENST00000383820 TRIM32Q13049 653 aa21.79■■□□□ 1.08
RPUSD3-201ENST00000383820 PDE3AQ14432 1141 aa21.79■■□□□ 1.08
RPUSD3-201ENST00000383820 CEP85Q6P2H3 762 aa21.79■■□□□ 1.08
RPUSD3-201ENST00000383820 TTC6Q86TZ1 520 aa21.79■■□□□ 1.08
RPUSD3-201ENST00000383820 MAGEB6Q8N7X4 407 aa21.79■■□□□ 1.08
RPUSD3-201ENST00000383820 DIS3LQ8TF46 1054 aaKnown RBP21.79■■□□□ 1.08
RPUSD3-201ENST00000383820 NBPF3Q9H094 633 aa21.79■■□□□ 1.08
RPUSD3-201ENST00000383820 SERPINB13Q9UIV8 391 aa21.79■■□□□ 1.08
RPUSD3-201ENST00000383820 GH2P01242 217 aa21.78■■□□□ 1.08
RPUSD3-201ENST00000383820 CYP2B6P20813 491 aa21.78■■□□□ 1.08
RPUSD3-201ENST00000383820 CCAR1Q8IX12 1150 aaKnown RBP21.78■■□□□ 1.08
RPUSD3-201ENST00000383820 MIGA1Q8NAN2 632 aa21.78■■□□□ 1.08
RPUSD3-201ENST00000383820 OGDHLQ9ULD0 1010 aa21.78■■□□□ 1.08
RPUSD3-201ENST00000383820 USP14P54578 494 aa21.77■■□□□ 1.08
RPUSD3-201ENST00000383820 USP6NLQ92738 828 aa21.77■■□□□ 1.08
RPUSD3-201ENST00000383820 PRKAR2AP13861 404 aaKnown RBP21.76■■□□□ 1.07
RPUSD3-201ENST00000383820 RGS2P41220 211 aa21.76■■□□□ 1.07
RPUSD3-201ENST00000383820 MNX1P50219 401 aaPredicted RBP21.76■■□□□ 1.07
RPUSD3-201ENST00000383820 Q3C1V9 767 aa21.76■■□□□ 1.07
RPUSD3-201ENST00000383820 HSP90AB4PQ58FF6 505 aa21.76■■□□□ 1.07
RPUSD3-201ENST00000383820 AACSQ86V21 672 aa21.76■■□□□ 1.07
RPUSD3-201ENST00000383820 FEZ1Q99689 392 aa21.76■■□□□ 1.07
RPUSD3-201ENST00000383820 KIAA1683Q9H0B3 1180 aa21.76■■□□□ 1.07
RPUSD3-201ENST00000383820 ANTXR1Q9H6X2 564 aa21.76■■□□□ 1.07
RPUSD3-201ENST00000383820 RABGAP1Q9Y3P9 1069 aa21.76■■□□□ 1.07
RPUSD3-201ENST00000383820 DDX60LQ5H9U9 1706 aaKnown RBP21.75■■□□□ 1.07
RPUSD3-201ENST00000383820 USP17L15C9J2P7 530 aa21.75■■□□□ 1.07
RPUSD3-201ENST00000383820 USP17L13C9JLJ4 530 aa21.75■■□□□ 1.07
RPUSD3-201ENST00000383820 USP17L11C9JVI0 530 aa21.75■■□□□ 1.07
RPUSD3-201ENST00000383820 USP17L18D6R9N7 530 aa21.75■■□□□ 1.07
RPUSD3-201ENST00000383820 USP17L22D6RA61 530 aa21.75■■□□□ 1.07
RPUSD3-201ENST00000383820 USP17L17D6RBQ6 530 aa21.75■■□□□ 1.07
RPUSD3-201ENST00000383820 USP17L19D6RCP7 530 aa21.75■■□□□ 1.07
RPUSD3-201ENST00000383820 USP17L20D6RJB6 530 aa21.75■■□□□ 1.07
RPUSD3-201ENST00000383820 PEX10O60683 326 aa21.75■■□□□ 1.07
RPUSD3-201ENST00000383820 ZKSCAN1P17029 563 aaPredicted RBP21.75■■□□□ 1.07
RPUSD3-201ENST00000383820 USP17L24Q0WX57 530 aa21.75■■□□□ 1.07
RPUSD3-201ENST00000383820 TTF1Q15361 905 aaPredicted RBP21.75■■□□□ 1.07
RPUSD3-201ENST00000383820 CERKLQ49MI3 558 aaPredicted RBP21.75■■□□□ 1.07
RPUSD3-201ENST00000383820 MORN1Q5T089 497 aa21.75■■□□□ 1.07
RPUSD3-201ENST00000383820 GPR142Q7Z601 462 aa21.75■■□□□ 1.07
RPUSD3-201ENST00000383820 PLEKHH3Q7Z736 793 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms