RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 TTC22Q5TAA0 569 aa12.4□□□□□ -0.42
PTCHD1-201ENST00000379361 LZTS2Q9BRK4 669 aa12.4□□□□□ -0.42
PTCHD1-201ENST00000379361 PARP2Q9UGN5 583 aa12.4□□□□□ -0.42
PTCHD1-201ENST00000379361 TSKSQ9UJT2 592 aa12.4□□□□□ -0.42
PTCHD1-201ENST00000379361 BBS5Q8N3I7 341 aa12.4□□□□□ -0.42
PTCHD1-201ENST00000379361 TMCO4Q5TGY1 634 aa12.4□□□□□ -0.42
PTCHD1-201ENST00000379361 ADPGKQ9BRR6 497 aa12.4□□□□□ -0.42
PTCHD1-201ENST00000379361 ASIC3Q9UHC3 531 aa12.4□□□□□ -0.42
PTCHD1-201ENST00000379361 TRIM35Q9UPQ4 493 aa12.4□□□□□ -0.42
PTCHD1-201ENST00000379361 ANO6Q4KMQ2 910 aa12.4□□□□□ -0.42
PTCHD1-201ENST00000379361 DEPTORQ8TB45 409 aa12.4□□□□□ -0.42
PTCHD1-201ENST00000379361 OLA1Q9NTK5 396 aaKnown RBP12.4□□□□□ -0.42
PTCHD1-201ENST00000379361 IQSEC3Q9UPP2 1182 aaPredicted RBP12.4□□□□□ -0.42
PTCHD1-201ENST00000379361 ZSCAN22P10073 491 aaPredicted RBP12.4□□□□□ -0.42
PTCHD1-201ENST00000379361 PRPSAP1Q14558 356 aa12.4□□□□□ -0.42
PTCHD1-201ENST00000379361 TBC1D8O95759 1140 aa12.4□□□□□ -0.43
PTCHD1-201ENST00000379361 RINT1Q6NUQ1 792 aa12.4□□□□□ -0.43
PTCHD1-201ENST00000379361 C8orf74Q6P047 294 aa12.4□□□□□ -0.43
PTCHD1-201ENST00000379361 PI4KAP2A4QPH2 592 aa12.4□□□□□ -0.43
PTCHD1-201ENST00000379361 PI4KAP1Q8N8J0 262 aa12.4□□□□□ -0.43
PTCHD1-201ENST00000379361 NVLO15381 856 aaKnown RBP12.39□□□□□ -0.43
PTCHD1-201ENST00000379361 FAM160A1Q05DH4 1040 aa12.39□□□□□ -0.43
PTCHD1-201ENST00000379361 MAIP1Q8WWC4 291 aa12.39□□□□□ -0.43
PTCHD1-201ENST00000379361 EIF2AK4Q9P2K8 1649 aaKnown RBP12.39□□□□□ -0.43
PTCHD1-201ENST00000379361 SPTLC2O15270 562 aa12.39□□□□□ -0.43
PTCHD1-201ENST00000379361 ZBTB8OSQ8IWT0 167 aa12.39□□□□□ -0.43
PTCHD1-201ENST00000379361 ZCRB1Q8TBF4 217 aaKnown RBP12.39□□□□□ -0.43
PTCHD1-201ENST00000379361 CFTRP13569 1480 aa12.39□□□□□ -0.43
PTCHD1-201ENST00000379361 LMNB1P20700 586 aa12.39□□□□□ -0.43
PTCHD1-201ENST00000379361 ABI1Q8IZP0 508 aa12.39□□□□□ -0.43
PTCHD1-201ENST00000379361 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.39□□□□□ -0.43
PTCHD1-201ENST00000379361 PPP2R5EQ16537 467 aa12.39□□□□□ -0.43
PTCHD1-201ENST00000379361 ANKRD20A3Q5VUR7 823 aa12.39□□□□□ -0.43
PTCHD1-201ENST00000379361 GLG1Q92896 1179 aa12.39□□□□□ -0.43
PTCHD1-201ENST00000379361 TXNDC9O14530 226 aa12.39□□□□□ -0.43
PTCHD1-201ENST00000379361 MRC2Q9UBG0 1479 aa12.39□□□□□ -0.43
PTCHD1-201ENST00000379361 IQCB1Q15051 598 aa12.39□□□□□ -0.43
PTCHD1-201ENST00000379361 MMEL1Q495T6 779 aa12.39□□□□□ -0.43
PTCHD1-201ENST00000379361 DZIP3Q86Y13 1208 aaKnown RBP12.39□□□□□ -0.43
PTCHD1-201ENST00000379361 SMC5Q8IY18 1101 aa12.39□□□□□ -0.43
PTCHD1-201ENST00000379361 AFAP1L1Q8TED9 768 aa12.39□□□□□ -0.43
PTCHD1-201ENST00000379361 RNF10Q8N5U6 811 aaKnown RBP12.39□□□□□ -0.43
PTCHD1-201ENST00000379361 IWS1Q96ST2 819 aa12.39□□□□□ -0.43
PTCHD1-201ENST00000379361 SPECC1L-ADORA2AF8WAN1 911 aa12.39□□□□□ -0.43
PTCHD1-201ENST00000379361 MYCLP12524 364 aaPredicted RBP12.39□□□□□ -0.43
PTCHD1-201ENST00000379361 PABPC4Q13310 644 aaKnown RBP eCLIP12.39□□□□□ -0.43
PTCHD1-201ENST00000379361 ATP8B3O60423 1300 aa12.39□□□□□ -0.43
PTCHD1-201ENST00000379361 SCHIP1Q9P0W5 487 aaPredicted RBP12.39□□□□□ -0.43
PTCHD1-201ENST00000379361 CSADQ9Y600 493 aa12.39□□□□□ -0.43
PTCHD1-201ENST00000379361 RIMBP2O15034 1052 aa12.38□□□□□ -0.43
PTCHD1-201ENST00000379361 GCNT3O95395 438 aa12.38□□□□□ -0.43
PTCHD1-201ENST00000379361 HPDP32754 393 aaPredicted RBP12.38□□□□□ -0.43
PTCHD1-201ENST00000379361 MIER3Q7Z3K6 550 aa12.38□□□□□ -0.43
PTCHD1-201ENST00000379361 TTC4O95801 387 aa12.38□□□□□ -0.43
PTCHD1-201ENST00000379361 HDAC11Q96DB2 347 aa12.38□□□□□ -0.43
PTCHD1-201ENST00000379361 ECE1P42892 770 aa12.38□□□□□ -0.43
PTCHD1-201ENST00000379361 GOLGA5Q8TBA6 731 aa12.38□□□□□ -0.43
PTCHD1-201ENST00000379361 GANCQ8TET4 914 aa12.38□□□□□ -0.43
PTCHD1-201ENST00000379361 GARSP41250 739 aaKnown RBP12.38□□□□□ -0.43
PTCHD1-201ENST00000379361 PHLDB3Q6NSJ2 640 aa12.38□□□□□ -0.43
PTCHD1-201ENST00000379361 DNM3Q9UQ16 869 aa12.38□□□□□ -0.43
PTCHD1-201ENST00000379361 GRM8O00222 908 aa12.38□□□□□ -0.43
PTCHD1-201ENST00000379361 RUFY3Q7L099 469 aa12.38□□□□□ -0.43
PTCHD1-201ENST00000379361 SUDS3Q9H7L9 328 aaPredicted RBP12.38□□□□□ -0.43
PTCHD1-201ENST00000379361 WASLO00401 505 aaPredicted RBP12.38□□□□□ -0.43
PTCHD1-201ENST00000379361 ZSCAN23Q3MJ62 389 aa12.38□□□□□ -0.43
PTCHD1-201ENST00000379361 LARGE2Q8N3Y3 721 aa12.38□□□□□ -0.43
PTCHD1-201ENST00000379361 SPDYE1Q8NFV5 336 aaPredicted RBP12.38□□□□□ -0.43
PTCHD1-201ENST00000379361 H0YIN7 160 aa12.38□□□□□ -0.43
PTCHD1-201ENST00000379361 BMP2KLQ5H9B9 411 aa12.38□□□□□ -0.43
PTCHD1-201ENST00000379361 NOC4LQ9BVI4 516 aaKnown RBP12.38□□□□□ -0.43
PTCHD1-201ENST00000379361 NUB1Q9Y5A7 615 aa12.38□□□□□ -0.43
PTCHD1-201ENST00000379361 DENND2AQ9ULE3 1009 aa12.38□□□□□ -0.43
PTCHD1-201ENST00000379361 NXNQ6DKJ4 435 aa12.38□□□□□ -0.43
PTCHD1-201ENST00000379361 FAM71BQ8TC56 605 aa12.38□□□□□ -0.43
PTCHD1-201ENST00000379361 RAB20Q9NX57 234 aa12.38□□□□□ -0.43
PTCHD1-201ENST00000379361 N4BP1O75113 896 aaKnown RBP12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 TAF11Q15544 211 aa12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 IQCDQ96DY2 449 aa12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 ACSBG1Q96GR2 724 aa12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 TTC25Q96NG3 672 aa12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 GBP5Q96PP8 586 aa12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 THUMPD2Q9BTF0 503 aaKnown RBP12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 CCDC105Q8IYK2 499 aa12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 BAG1Q99933 345 aaPredicted RBP12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 SLC1A4P43007 532 aa12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 CDCA7Q9BWT1 371 aaPredicted RBP12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 SLC12A6Q9UHW9 1150 aa12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 KDM3AQ9Y4C1 1321 aa12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 PPP2R3AQ06190 1150 aa12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 CCDC93Q567U6 631 aa12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 FNBP4Q8N3X1 1017 aaPredicted RBP12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 LRRC2Q9BYS8 371 aa12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 PPP1R12CQ9BZL4 782 aa12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 VPS18Q9P253 973 aa12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 WDR64B1ANS9 1081 aa12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 PDZD8Q8NEN9 1154 aa12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 CXorf38Q8TB03 319 aa12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 MRPL46Q9H2W6 279 aaKnown RBP12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 PNMA8AQ86V59 439 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms