RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 PROCA1Q8NCQ7 364 aaPredicted RBP15.56■□□□□ 0.08
HDAC8-204ENST00000373560 RUNDC1Q96C34 613 aa15.56■□□□□ 0.08
HDAC8-204ENST00000373560 PORCNQ9H237 461 aa15.56■□□□□ 0.08
HDAC8-204ENST00000373560 IFT57Q9NWB7 429 aa15.56■□□□□ 0.08
HDAC8-204ENST00000373560 MYH2Q9UKX2 1941 aa15.55■□□□□ 0.08
HDAC8-204ENST00000373560 LRRC37A2A6NM11 1700 aa15.55■□□□□ 0.08
HDAC8-204ENST00000373560 BMP1P13497 986 aa15.55■□□□□ 0.08
HDAC8-204ENST00000373560 KCNQ1P51787 676 aa15.55■□□□□ 0.08
HDAC8-204ENST00000373560 CCDC57Q2TAC2 916 aa15.55■□□□□ 0.08
HDAC8-204ENST00000373560 SLC39A5Q6ZMH5 540 aa15.55■□□□□ 0.08
HDAC8-204ENST00000373560 VPS37DQ86XT2 251 aa15.55■□□□□ 0.08
HDAC8-204ENST00000373560 TRPV1Q8NER1 839 aa15.55■□□□□ 0.08
HDAC8-204ENST00000373560 SOCS4Q8WXH5 440 aa15.55■□□□□ 0.08
HDAC8-204ENST00000373560 TIFAQ96CG3 184 aa15.55■□□□□ 0.08
HDAC8-204ENST00000373560 MYH16Q9H6N6 1097 aa15.55■□□□□ 0.08
HDAC8-204ENST00000373560 GRXCR1A8MXD5 290 aa15.54■□□□□ 0.08
HDAC8-204ENST00000373560 DNM1LO00429 736 aa15.54■□□□□ 0.08
HDAC8-204ENST00000373560 PRDX5P30044 214 aa15.54■□□□□ 0.08
HDAC8-204ENST00000373560 MAP3K10Q02779 954 aa15.54■□□□□ 0.08
HDAC8-204ENST00000373560 SPP2Q13103 211 aa15.54■□□□□ 0.08
HDAC8-204ENST00000373560 RRP1BQ14684 758 aaKnown RBP15.54■□□□□ 0.08
HDAC8-204ENST00000373560 Q3C1V9 767 aa15.54■□□□□ 0.08
HDAC8-204ENST00000373560 MORN1Q5T089 497 aa15.54■□□□□ 0.08
HDAC8-204ENST00000373560 AKNAD1Q5T1N1 836 aa15.54■□□□□ 0.08
HDAC8-204ENST00000373560 LINS1Q8NG48 757 aa15.54■□□□□ 0.08
HDAC8-204ENST00000373560 APBA2Q99767 749 aa15.54■□□□□ 0.08
HDAC8-204ENST00000373560 DDX4Q9NQI0 724 aaKnown RBP15.54■□□□□ 0.08
HDAC8-204ENST00000373560 USP40Q9NVE5 1235 aa15.54■□□□□ 0.08
HDAC8-204ENST00000373560 DDX20Q9UHI6 824 aaKnown RBP15.54■□□□□ 0.08
HDAC8-204ENST00000373560 LRRFIP2Q9Y608 721 aaKnown RBP15.54■□□□□ 0.08
HDAC8-204ENST00000373560 STK24Q9Y6E0 443 aa15.54■□□□□ 0.08
HDAC8-204ENST00000373560 SNX17Q15036 470 aa15.53■□□□□ 0.08
HDAC8-204ENST00000373560 ANO1Q5XXA6 986 aa15.53■□□□□ 0.08
HDAC8-204ENST00000373560 DNAAF4Q8WXU2 420 aa15.53■□□□□ 0.08
HDAC8-204ENST00000373560 GAS2L1Q99501 681 aaPredicted RBP15.53■□□□□ 0.08
HDAC8-204ENST00000373560 MYO9BQ13459 2157 aa15.53■□□□□ 0.08
HDAC8-204ENST00000373560 SIPA1L1O43166 1804 aa15.52■□□□□ 0.08
HDAC8-204ENST00000373560 CTNND1O60716 968 aaKnown RBP15.52■□□□□ 0.08
HDAC8-204ENST00000373560 RGS2P41220 211 aa15.52■□□□□ 0.08
HDAC8-204ENST00000373560 FLIIQ13045 1269 aa15.52■□□□□ 0.08
HDAC8-204ENST00000373560 LRRC24Q50LG9 513 aa15.52■□□□□ 0.08
HDAC8-204ENST00000373560 TMEM31Q5JXX7 168 aa15.52■□□□□ 0.08
HDAC8-204ENST00000373560 GPR142Q7Z601 462 aa15.52■□□□□ 0.08
HDAC8-204ENST00000373560 VGLL2Q8N8G2 317 aa15.52■□□□□ 0.08
HDAC8-204ENST00000373560 IL27Q8NEV9 243 aa15.52■□□□□ 0.08
HDAC8-204ENST00000373560 LPAR1Q92633 364 aa15.52■□□□□ 0.08
HDAC8-204ENST00000373560 P2RX7Q99572 595 aaKnown RBP15.52■□□□□ 0.08
HDAC8-204ENST00000373560 SUGT1Q9Y2Z0 365 aa15.52■□□□□ 0.08
HDAC8-204ENST00000373560 NDUFB9Q9Y6M9 179 aa15.52■□□□□ 0.08
HDAC8-204ENST00000373560 MRE11P49959 708 aa15.51■□□□□ 0.07
HDAC8-204ENST00000373560 GNAI1P63096 354 aa15.51■□□□□ 0.07
HDAC8-204ENST00000373560 TRMT44Q8IYL2 757 aaKnown RBP15.51■□□□□ 0.07
HDAC8-204ENST00000373560 TSR2Q969E8 191 aaKnown RBP15.51■□□□□ 0.07
HDAC8-204ENST00000373560 RBPJLQ9UBG7 517 aa15.51■□□□□ 0.07
HDAC8-204ENST00000373560 F6X3S4 739 aa15.5■□□□□ 0.07
HDAC8-204ENST00000373560 CNGA1P29973 690 aa15.5■□□□□ 0.07
HDAC8-204ENST00000373560 ZSCAN29Q8IWY8 852 aaPredicted RBP15.5■□□□□ 0.07
HDAC8-204ENST00000373560 PBX4Q9BYU1 374 aa15.5■□□□□ 0.07
HDAC8-204ENST00000373560 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.49■□□□□ 0.07
HDAC8-204ENST00000373560 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.49■□□□□ 0.07
HDAC8-204ENST00000373560 IGFBP4P22692 258 aa15.49■□□□□ 0.07
HDAC8-204ENST00000373560 CYP2C19P33261 490 aa15.49■□□□□ 0.07
HDAC8-204ENST00000373560 HERVK_113P62684 666 aa15.49■□□□□ 0.07
HDAC8-204ENST00000373560 FKBP5Q13451 457 aaPredicted RBP15.49■□□□□ 0.07
HDAC8-204ENST00000373560 CAVIN4Q5BKX8 364 aa15.49■□□□□ 0.07
HDAC8-204ENST00000373560 ZNF280CQ8ND82 737 aa15.49■□□□□ 0.07
HDAC8-204ENST00000373560 SLC39A7Q92504 469 aa15.49■□□□□ 0.07
HDAC8-204ENST00000373560 FERMT2Q96AC1 680 aa15.49■□□□□ 0.07
HDAC8-204ENST00000373560 KAZALD1Q96I82 304 aa15.49■□□□□ 0.07
HDAC8-204ENST00000373560 IDI2Q9BXS1 227 aa15.49■□□□□ 0.07
HDAC8-204ENST00000373560 STK31Q9BXU1 1019 aa15.49■□□□□ 0.07
HDAC8-204ENST00000373560 CXXC1Q9P0U4 656 aaPredicted RBP15.49■□□□□ 0.07
HDAC8-204ENST00000373560 ERVK-9P63128 1117 aa15.48■□□□□ 0.07
HDAC8-204ENST00000373560 ERVK-24P63145 666 aa15.48■□□□□ 0.07
HDAC8-204ENST00000373560 TLE2Q04725 743 aa15.48■□□□□ 0.07
HDAC8-204ENST00000373560 MAP2K5Q13163 448 aa15.48■□□□□ 0.07
HDAC8-204ENST00000373560 PICALMQ13492 652 aa15.48■□□□□ 0.07
HDAC8-204ENST00000373560 SHROOM1Q2M3G4 852 aaPredicted RBP15.48■□□□□ 0.07
HDAC8-204ENST00000373560 SH3D19Q5HYK7 790 aa15.48■□□□□ 0.07
HDAC8-204ENST00000373560 BEND3Q5T5X7 828 aa15.48■□□□□ 0.07
HDAC8-204ENST00000373560 PLEKHH3Q7Z736 793 aa15.48■□□□□ 0.07
HDAC8-204ENST00000373560 GPRC5AQ8NFJ5 357 aa15.48■□□□□ 0.07
HDAC8-204ENST00000373560 NPLOC4Q8TAT6 608 aa15.48■□□□□ 0.07
HDAC8-204ENST00000373560 UTYO14607 1347 aa15.47■□□□□ 0.07
HDAC8-204ENST00000373560 MROH5Q6ZUA9 1318 aa15.47■□□□□ 0.07
HDAC8-204ENST00000373560 ENTPD3O75355 529 aa15.47■□□□□ 0.07
HDAC8-204ENST00000373560 MAPK4P31152 587 aa15.47■□□□□ 0.07
HDAC8-204ENST00000373560 ADCYAP1R1P41586 468 aa15.47■□□□□ 0.07
HDAC8-204ENST00000373560 IRX3P78415 501 aaPredicted RBP15.47■□□□□ 0.07
HDAC8-204ENST00000373560 PABPC4Q13310 644 aaKnown RBP eCLIP15.47■□□□□ 0.07
HDAC8-204ENST00000373560 METTL24Q5JXM2 366 aa15.47■□□□□ 0.07
HDAC8-204ENST00000373560 SUCLG2Q96I99 432 aa15.47■□□□□ 0.07
HDAC8-204ENST00000373560 PAGR1Q9BTK6 254 aa15.47■□□□□ 0.07
HDAC8-204ENST00000373560 METRNQ9UJH8 293 aa15.47■□□□□ 0.07
HDAC8-204ENST00000373560 ADAMTS8Q9UP79 889 aa15.47■□□□□ 0.07
HDAC8-204ENST00000373560 CYBAP13498 195 aa15.46■□□□□ 0.07
HDAC8-204ENST00000373560 JAG1P78504 1218 aa15.46■□□□□ 0.07
HDAC8-204ENST00000373560 MTMR2Q13614 643 aa15.46■□□□□ 0.07
HDAC8-204ENST00000373560 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.46■□□□□ 0.077e-6■■□□□ 11.5
HDAC8-204ENST00000373560 GRM8O00222 908 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms