RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 HAUS3Q68CZ6 603 aa8.22□□□□□ -1.09
VTA1-202ENST00000367630 STAG1Q8WVM7 1258 aa8.22□□□□□ -1.09
VTA1-202ENST00000367630 GDPD2Q9HCC8 539 aa8.22□□□□□ -1.09
VTA1-202ENST00000367630 AATFQ9NY61 560 aaKnown RBP eCLIP8.22□□□□□ -1.09
VTA1-202ENST00000367630 TSPY2A6NKD2 308 aa8.22□□□□□ -1.09
VTA1-202ENST00000367630 SH2B2O14492 632 aaPredicted RBP8.22□□□□□ -1.09
VTA1-202ENST00000367630 EVCP57679 992 aa8.22□□□□□ -1.09
VTA1-202ENST00000367630 PTPN12Q05209 780 aaKnown RBP8.22□□□□□ -1.09
VTA1-202ENST00000367630 B4GALNT4Q76KP1 1039 aa8.22□□□□□ -1.09
VTA1-202ENST00000367630 MICU3Q86XE3 530 aa8.22□□□□□ -1.09
VTA1-202ENST00000367630 SYCE1Q8N0S2 351 aa8.22□□□□□ -1.09
VTA1-202ENST00000367630 LINC00301Q8NCQ3 95 aa8.22□□□□□ -1.09
VTA1-202ENST00000367630 ZBTB3Q9H5J0 574 aa8.22□□□□□ -1.09
VTA1-202ENST00000367630 SH2D4AQ9H788 454 aa8.22□□□□□ -1.09
VTA1-202ENST00000367630 CCDC170Q8IYT3 715 aa8.22□□□□□ -1.09
VTA1-202ENST00000367630 TRIM47Q96LD4 638 aa8.22□□□□□ -1.09
VTA1-202ENST00000367630 EYA3Q99504 573 aa8.22□□□□□ -1.09
VTA1-202ENST00000367630 SETD1BQ9UPS6 1966 aaKnown RBP8.22□□□□□ -1.09
VTA1-202ENST00000367630 ITIH6Q6UXX5 1313 aa8.22□□□□□ -1.09
VTA1-202ENST00000367630 CEBPAP49715 358 aaPredicted RBP8.21□□□□□ -1.09
VTA1-202ENST00000367630 DNM2P50570 870 aa8.21□□□□□ -1.09
VTA1-202ENST00000367630 TPTE2Q6XPS3 522 aa8.21□□□□□ -1.09
VTA1-202ENST00000367630 GAS2L3Q86XJ1 694 aa8.21□□□□□ -1.09
VTA1-202ENST00000367630 ZNF496Q96IT1 587 aaPredicted RBP8.21□□□□□ -1.09
VTA1-202ENST00000367630 DKC1O60832 514 aaKnown RBP eCLIP8.21□□□□□ -1.09
VTA1-202ENST00000367630 GCFC2P16383 781 aaKnown RBP8.21□□□□□ -1.09
VTA1-202ENST00000367630 ATP5DP30049 168 aa8.21□□□□□ -1.09
VTA1-202ENST00000367630 GOLGA5Q8TBA6 731 aa8.21□□□□□ -1.09
VTA1-202ENST00000367630 MAIP1Q8WWC4 291 aa8.21□□□□□ -1.09
VTA1-202ENST00000367630 THAP9Q9H5L6 903 aa8.21□□□□□ -1.09
VTA1-202ENST00000367630 BZW2Q9Y6E2 419 aaKnown RBP8.21□□□□□ -1.09
VTA1-202ENST00000367630 RIOK3O14730 519 aaKnown RBP8.21□□□□□ -1.1
VTA1-202ENST00000367630 SMARCA1P28370 1054 aa8.21□□□□□ -1.1
VTA1-202ENST00000367630 GRIPAP1Q4V328 841 aa8.21□□□□□ -1.1
VTA1-202ENST00000367630 TTC38Q5R3I4 469 aa8.21□□□□□ -1.1
VTA1-202ENST00000367630 NBPF14Q5TI25 921 aa8.21□□□□□ -1.1
VTA1-202ENST00000367630 RESP18Q5W5W9 173 aa8.21□□□□□ -1.1
VTA1-202ENST00000367630 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.21□□□□□ -1.1
VTA1-202ENST00000367630 STK17AQ9UEE5 414 aa8.21□□□□□ -1.1
VTA1-202ENST00000367630 GADD45BO75293 160 aaPredicted RBP8.21□□□□□ -1.1
VTA1-202ENST00000367630 TRIM21P19474 475 aaKnown RBP8.21□□□□□ -1.1
VTA1-202ENST00000367630 ARID4AP29374 1257 aaPredicted RBP8.21□□□□□ -1.1
VTA1-202ENST00000367630 ISCA1Q9BUE6 129 aa8.21□□□□□ -1.1
VTA1-202ENST00000367630 DBNLQ9UJU6 430 aaKnown RBP8.21□□□□□ -1.1
VTA1-202ENST00000367630 FOSBP53539 338 aa8.21□□□□□ -1.1
VTA1-202ENST00000367630 KRT79Q5XKE5 535 aa8.21□□□□□ -1.1
VTA1-202ENST00000367630 CCDC65Q8IXS2 484 aa8.21□□□□□ -1.1
VTA1-202ENST00000367630 TBC1D5Q92609 795 aa8.21□□□□□ -1.1
VTA1-202ENST00000367630 SRPRBQ9Y5M8 271 aaKnown RBP8.21□□□□□ -1.1
VTA1-202ENST00000367630 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.21□□□□□ -1.1
VTA1-202ENST00000367630 KDM3BQ7LBC6 1761 aa8.21□□□□□ -1.1
VTA1-202ENST00000367630 RANBP6O60518 1105 aaKnown RBP8.21□□□□□ -1.1
VTA1-202ENST00000367630 PFKFB1P16118 471 aa8.21□□□□□ -1.1
VTA1-202ENST00000367630 CDC37Q16543 378 aaPredicted RBP8.21□□□□□ -1.1
VTA1-202ENST00000367630 TSHZ3Q63HK5 1081 aa8.21□□□□□ -1.1
VTA1-202ENST00000367630 FNBP4Q8N3X1 1017 aaPredicted RBP8.21□□□□□ -1.1
VTA1-202ENST00000367630 RPGRQ92834 1020 aaKnown RBP8.21□□□□□ -1.1
VTA1-202ENST00000367630 KIF23Q02241 960 aaPredicted RBP8.2□□□□□ -1.1
VTA1-202ENST00000367630 SCRN1Q12765 414 aa8.2□□□□□ -1.1
VTA1-202ENST00000367630 SYTL4Q96C24 671 aaPredicted RBP8.2□□□□□ -1.1
VTA1-202ENST00000367630 RWDD2AQ9UIY3 292 aa8.2□□□□□ -1.1
VTA1-202ENST00000367630 ARMC9Q7Z3E5 817 aa8.2□□□□□ -1.1
VTA1-202ENST00000367630 TRIM58Q8NG06 486 aa8.2□□□□□ -1.1
VTA1-202ENST00000367630 DIS3Q9Y2L1 958 aaKnown RBP8.2□□□□□ -1.1
VTA1-202ENST00000367630 PDE8BO95263 885 aa8.2□□□□□ -1.1
VTA1-202ENST00000367630 PPP4R3CPQ6ZMV5 832 aa8.2□□□□□ -1.1
VTA1-202ENST00000367630 SV2BQ7L1I2 683 aa8.2□□□□□ -1.1
VTA1-202ENST00000367630 VSTM4Q8IW00 320 aa8.2□□□□□ -1.1
VTA1-202ENST00000367630 RBM17Q96I25 401 aaKnown RBP8.2□□□□□ -1.1
VTA1-202ENST00000367630 SWAP70Q9UH65 585 aa8.2□□□□□ -1.1
VTA1-202ENST00000367630 GOLGA8KD6RF30 607 aa8.2□□□□□ -1.1
VTA1-202ENST00000367630 TSPY3P0CV98 308 aa8.2□□□□□ -1.1
VTA1-202ENST00000367630 TSPY8P0CW00 308 aa8.2□□□□□ -1.1
VTA1-202ENST00000367630 EXOSC10Q01780 885 aaKnown RBP8.2□□□□□ -1.1
VTA1-202ENST00000367630 GLE1Q53GS7 698 aaKnown RBP8.2□□□□□ -1.1
VTA1-202ENST00000367630 AXDND1Q5T1B0 1012 aaPredicted RBP8.2□□□□□ -1.1
VTA1-202ENST00000367630 DIS3L2Q8IYB7 885 aaKnown RBP8.2□□□□□ -1.1
VTA1-202ENST00000367630 ATP5J2-PTCD1G3V325 749 aa8.2□□□□□ -1.1
VTA1-202ENST00000367630 PTCD1O75127 700 aaKnown RBP8.2□□□□□ -1.1
VTA1-202ENST00000367630 MRPL12P52815 198 aaKnown RBP8.2□□□□□ -1.1
VTA1-202ENST00000367630 DMTNQ08495 405 aa8.2□□□□□ -1.1
VTA1-202ENST00000367630 TTLL5Q6EMB2 1281 aa8.2□□□□□ -1.1
VTA1-202ENST00000367630 FAM71BQ8TC56 605 aa8.2□□□□□ -1.1
VTA1-202ENST00000367630 AGXT2Q9BYV1 514 aa8.2□□□□□ -1.1
VTA1-202ENST00000367630 PLCB1Q9NQ66 1216 aa8.2□□□□□ -1.1
VTA1-202ENST00000367630 PARP2Q9UGN5 583 aa8.2□□□□□ -1.1
VTA1-202ENST00000367630 FAM184BQ9ULE4 1060 aa8.2□□□□□ -1.1
VTA1-202ENST00000367630 PCDHA7Q9UN72 937 aa8.2□□□□□ -1.1
VTA1-202ENST00000367630 LEMD3Q9Y2U8 911 aa8.2□□□□□ -1.1
VTA1-202ENST00000367630 CALUO43852 315 aaPredicted RBP8.19□□□□□ -1.1
VTA1-202ENST00000367630 PPFIA1Q13136 1202 aa8.19□□□□□ -1.1
VTA1-202ENST00000367630 JAKMIP2Q96AA8 810 aa8.19□□□□□ -1.1
VTA1-202ENST00000367630 RIC8AQ9NPQ8 531 aa8.19□□□□□ -1.1
VTA1-202ENST00000367630 ATRNO75882 1429 aa8.19□□□□□ -1.1
VTA1-202ENST00000367630 ANO9A1A5B4 782 aa8.19□□□□□ -1.1
VTA1-202ENST00000367630 LMNB2Q03252 620 aa8.19□□□□□ -1.1
VTA1-202ENST00000367630 PPARAQ07869 468 aa8.19□□□□□ -1.1
VTA1-202ENST00000367630 MAGEB6Q8N7X4 407 aa8.19□□□□□ -1.1
VTA1-202ENST00000367630 CCDC102AQ96A19 550 aa8.19□□□□□ -1.1
VTA1-202ENST00000367630 MPHOSPH6Q99547 160 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms