RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 ZNF396Q96N95 335 aaPredicted RBP8.36□□□□□ -1.07
NPHP1-201ENST00000316534 USP28Q96RU2 1077 aa8.36□□□□□ -1.07
NPHP1-201ENST00000316534 SGIP1Q9BQI5 828 aa8.36□□□□□ -1.07
NPHP1-201ENST00000316534 RBSNQ9H1K0 784 aa8.36□□□□□ -1.07
NPHP1-201ENST00000316534 RRAGDQ9NQL2 400 aaPredicted RBP8.36□□□□□ -1.07
NPHP1-201ENST00000316534 DDX19AQ9NUU7 478 aaKnown RBP8.36□□□□□ -1.07
NPHP1-201ENST00000316534 SBF1O95248 1867 aa8.35□□□□□ -1.07
NPHP1-201ENST00000316534 GOLGA8AA7E2F4 631 aa8.35□□□□□ -1.07
NPHP1-201ENST00000316534 APPP05067 770 aa8.35□□□□□ -1.07
NPHP1-201ENST00000316534 BTDP43251 543 aa8.35□□□□□ -1.07
NPHP1-201ENST00000316534 DZIP1Q86YF9 867 aaKnown RBP8.35□□□□□ -1.07
NPHP1-201ENST00000316534 MTMR14Q8NCE2 650 aa8.35□□□□□ -1.07
NPHP1-201ENST00000316534 NEDD1Q8NHV4 660 aa8.35□□□□□ -1.07
NPHP1-201ENST00000316534 ZBED3Q96IU2 234 aaPredicted RBP8.35□□□□□ -1.07
NPHP1-201ENST00000316534 GMLQ99445 158 aa8.35□□□□□ -1.07
NPHP1-201ENST00000316534 CYP2D7A0A087X1C5 515 aa8.35□□□□□ -1.07
NPHP1-201ENST00000316534 VPS37CA5D8V6 355 aaPredicted RBP8.35□□□□□ -1.07
NPHP1-201ENST00000316534 PALM3A6NDB9 673 aaPredicted RBP8.35□□□□□ -1.07
NPHP1-201ENST00000316534 CYP2D6P10635 497 aa8.35□□□□□ -1.07
NPHP1-201ENST00000316534 RTN1Q16799 776 aa8.35□□□□□ -1.07
NPHP1-201ENST00000316534 FAM184AQ8NB25 1140 aa8.35□□□□□ -1.07
NPHP1-201ENST00000316534 C8orf76Q96K31 380 aa8.35□□□□□ -1.07
NPHP1-201ENST00000316534 GPR101Q96P66 508 aaPredicted RBP8.35□□□□□ -1.07
NPHP1-201ENST00000316534 STK32BQ9NY57 414 aa8.35□□□□□ -1.07
NPHP1-201ENST00000316534 SYNPO2Q9UMS6 1093 aa8.35□□□□□ -1.07
NPHP1-201ENST00000316534 CCDC69A6NI79 296 aa8.35□□□□□ -1.07
NPHP1-201ENST00000316534 SLC3A2P08195 630 aaKnown RBP8.35□□□□□ -1.07
NPHP1-201ENST00000316534 PDE4BQ07343 736 aa8.35□□□□□ -1.07
NPHP1-201ENST00000316534 SLC39A14Q15043 492 aa8.35□□□□□ -1.07
NPHP1-201ENST00000316534 SLC35G1Q2M3R5 365 aa8.35□□□□□ -1.07
NPHP1-201ENST00000316534 KRT40Q6A162 431 aa8.35□□□□□ -1.07
NPHP1-201ENST00000316534 FMR1NBQ8N0W7 255 aaPredicted RBP8.35□□□□□ -1.07
NPHP1-201ENST00000316534 TIGD1Q96MW7 591 aa8.35□□□□□ -1.07
NPHP1-201ENST00000316534 MAD2L2Q9UI95 211 aa8.35□□□□□ -1.07
NPHP1-201ENST00000316534 SERPINA10Q9UK55 444 aa8.35□□□□□ -1.07
NPHP1-201ENST00000316534 USP17L8P0C7I0 530 aa8.34□□□□□ -1.07
NPHP1-201ENST00000316534 TOB1P50616 345 aaPredicted RBP8.34□□□□□ -1.07
NPHP1-201ENST00000316534 SSRP1Q08945 709 aaKnown RBP8.34□□□□□ -1.07
NPHP1-201ENST00000316534 HS1BP3Q53T59 392 aa8.34□□□□□ -1.07
NPHP1-201ENST00000316534 C2CD5Q86YS7 1000 aa8.34□□□□□ -1.07
NPHP1-201ENST00000316534 GDPD2Q9HCC8 539 aa8.34□□□□□ -1.07
NPHP1-201ENST00000316534 PGAP2Q9UHJ9 254 aa8.34□□□□□ -1.07
NPHP1-201ENST00000316534 WDR90Q96KV7 1748 aa8.34□□□□□ -1.07
NPHP1-201ENST00000316534 CLCN1P35523 988 aa8.34□□□□□ -1.07
NPHP1-201ENST00000316534 PLCD1P51178 756 aa8.34□□□□□ -1.07
NPHP1-201ENST00000316534 DIXDC1Q155Q3 683 aa8.34□□□□□ -1.07
NPHP1-201ENST00000316534 MFSD14BQ5SR56 506 aa8.34□□□□□ -1.07
NPHP1-201ENST00000316534 ZNF579Q8NAF0 562 aaKnown RBP8.34□□□□□ -1.07
NPHP1-201ENST00000316534 KCNG4Q8TDN1 519 aa8.34□□□□□ -1.07
NPHP1-201ENST00000316534 DDX11Q96FC9 970 aa8.34□□□□□ -1.07
NPHP1-201ENST00000316534 SPATA32Q96LK8 384 aa8.34□□□□□ -1.07
NPHP1-201ENST00000316534 ALG1Q9BT22 464 aa8.34□□□□□ -1.07
NPHP1-201ENST00000316534 GOLPH3LQ9H4A5 285 aa8.34□□□□□ -1.07
NPHP1-201ENST00000316534 DOCK1Q14185 1865 aa8.34□□□□□ -1.07
NPHP1-201ENST00000316534 LTBP3Q9NS15 1303 aa8.34□□□□□ -1.07
NPHP1-201ENST00000316534 LIG1P18858 919 aa8.34□□□□□ -1.08
NPHP1-201ENST00000316534 GUCY1A2P33402 732 aa8.34□□□□□ -1.08
NPHP1-201ENST00000316534 IARSP41252 1262 aaKnown RBP8.34□□□□□ -1.08
NPHP1-201ENST00000316534 SUPT20HQ8NEM7 779 aa8.34□□□□□ -1.08
NPHP1-201ENST00000316534 SWAP70Q9UH65 585 aa8.34□□□□□ -1.08
NPHP1-201ENST00000316534 H0YIN7 160 aa8.33□□□□□ -1.08
NPHP1-201ENST00000316534 MAP3K10Q02779 954 aa8.33□□□□□ -1.08
NPHP1-201ENST00000316534 PFKFB3Q16875 520 aaPredicted RBP8.33□□□□□ -1.08
NPHP1-201ENST00000316534 TATDN1Q6P1N9 297 aa8.33□□□□□ -1.08
NPHP1-201ENST00000316534 DPP8Q6V1X1 898 aaPredicted RBP8.33□□□□□ -1.08
NPHP1-201ENST00000316534 MTMR8Q96EF0 704 aa8.33□□□□□ -1.08
NPHP1-201ENST00000316534 SPZ1Q9BXG8 430 aa8.33□□□□□ -1.08
NPHP1-201ENST00000316534 EN1Q05925 392 aaPredicted RBP8.33□□□□□ -1.08
NPHP1-201ENST00000316534 FAM173BQ6P4H8 233 aa8.33□□□□□ -1.08
NPHP1-201ENST00000316534 IQCA1Q86XH1 822 aa8.33□□□□□ -1.08
NPHP1-201ENST00000316534 SRBD1Q8N5C6 995 aaKnown RBP8.33□□□□□ -1.08
NPHP1-201ENST00000316534 LZTS2Q9BRK4 669 aa8.33□□□□□ -1.08
NPHP1-201ENST00000316534 A0A0G2JMZ2 1700 aa8.33□□□□□ -1.08
NPHP1-201ENST00000316534 H3BQV1 296 aa8.33□□□□□ -1.08
NPHP1-201ENST00000316534 CMA1P23946 247 aa8.33□□□□□ -1.08
NPHP1-201ENST00000316534 CHAF1AQ13111 956 aaPredicted RBP8.33□□□□□ -1.08
NPHP1-201ENST00000316534 IFFO2Q5TF58 517 aa8.33□□□□□ -1.08
NPHP1-201ENST00000316534 CPLX2Q6PUV4 134 aaKnown RBP8.33□□□□□ -1.08
NPHP1-201ENST00000316534 MKL1Q969V6 931 aa8.33□□□□□ -1.08
NPHP1-201ENST00000316534 BPIFA3Q9BQP9 254 aa8.33□□□□□ -1.08
NPHP1-201ENST00000316534 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.33□□□□□ -1.08
NPHP1-201ENST00000316534 PCDHA7Q9UN72 937 aa8.33□□□□□ -1.08
NPHP1-201ENST00000316534 CTAGE5O15320 804 aa8.32□□□□□ -1.08
NPHP1-201ENST00000316534 CDK8P49336 464 aa8.32□□□□□ -1.08
NPHP1-201ENST00000316534 TGFB2P61812 414 aa8.32□□□□□ -1.08
NPHP1-201ENST00000316534 IFIT1BQ5T764 474 aaKnown RBP8.32□□□□□ -1.08
NPHP1-201ENST00000316534 RESP18Q5W5W9 173 aa8.32□□□□□ -1.08
NPHP1-201ENST00000316534 ANO1Q5XXA6 986 aa8.32□□□□□ -1.08
NPHP1-201ENST00000316534 NOSTRINQ8IVI9 506 aa8.32□□□□□ -1.08
NPHP1-201ENST00000316534 UBAC1Q9BSL1 405 aa8.32□□□□□ -1.08
NPHP1-201ENST00000316534 OSBPL5Q9H0X9 879 aaPredicted RBP8.32□□□□□ -1.08
NPHP1-201ENST00000316534 DDX4Q9NQI0 724 aaKnown RBP8.32□□□□□ -1.08
NPHP1-201ENST00000316534 CLIC4Q9Y696 253 aa8.32□□□□□ -1.08
NPHP1-201ENST00000316534 ERICH2A1L162 156 aa8.32□□□□□ -1.08
NPHP1-201ENST00000316534 SYCE3A1L190 88 aa8.32□□□□□ -1.08
NPHP1-201ENST00000316534 YDJCA8MPS7 323 aa8.32□□□□□ -1.08
NPHP1-201ENST00000316534 FIBPO43427 364 aa8.32□□□□□ -1.08
NPHP1-201ENST00000316534 CAVIN2O95810 425 aa8.32□□□□□ -1.08
NPHP1-201ENST00000316534 FGD1P98174 961 aa8.32□□□□□ -1.08
NPHP1-201ENST00000316534 CCDC173Q0VFZ6 552 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms