RNA–Protein interactions for RNA: ENST00000268099.13

SCAMP2-201, Transcript of secretory carrier membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP2, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-201ENST00000268099 NOSTRINQ8IVI9 506 aa17.46■□□□□ 0.39
SCAMP2-201ENST00000268099 MICALL1Q8N3F8 863 aa17.46■□□□□ 0.39
SCAMP2-201ENST00000268099 CTAGE1Q96RT6 745 aa17.46■□□□□ 0.39
SCAMP2-201ENST00000268099 DENND2AQ9ULE3 1009 aa17.46■□□□□ 0.39
SCAMP2-201ENST00000268099 MYO5AQ9Y4I1 1855 aaKnown RBP17.46■□□□□ 0.39
SCAMP2-201ENST00000268099 UBN2Q6ZU65 1347 aa17.46■□□□□ 0.39
SCAMP2-201ENST00000268099 CDHR2Q9BYE9 1310 aa17.46■□□□□ 0.39
SCAMP2-201ENST00000268099 SH2B2O14492 632 aaPredicted RBP17.46■□□□□ 0.39
SCAMP2-201ENST00000268099 USP14P54578 494 aa17.46■□□□□ 0.39
SCAMP2-201ENST00000268099 ERVK-24P63145 666 aa17.46■□□□□ 0.39
SCAMP2-201ENST00000268099 MAP9Q49MG5 647 aa17.46■□□□□ 0.39
SCAMP2-201ENST00000268099 FILIP1LQ4L180 1135 aa17.46■□□□□ 0.39
SCAMP2-201ENST00000268099 CDKAL1Q5VV42 579 aa17.46■□□□□ 0.39
SCAMP2-201ENST00000268099 MCTP2Q6DN12 878 aa17.46■□□□□ 0.39
SCAMP2-201ENST00000268099 SMARCC1Q92922 1105 aaPredicted RBP17.46■□□□□ 0.39
SCAMP2-201ENST00000268099 PHF8Q9UPP1 1060 aa17.46■□□□□ 0.39
SCAMP2-201ENST00000268099 LMTK3Q96Q04 1460 aa17.46■□□□□ 0.38
SCAMP2-201ENST00000268099 ZC3H4Q9UPT8 1303 aaKnown RBP17.45■□□□□ 0.38
SCAMP2-201ENST00000268099 RANBP6O60518 1105 aaKnown RBP17.45■□□□□ 0.38
SCAMP2-201ENST00000268099 TOB1P50616 345 aaPredicted RBP17.45■□□□□ 0.38
SCAMP2-201ENST00000268099 STX17P56962 302 aa17.45■□□□□ 0.38
SCAMP2-201ENST00000268099 NTRK3Q16288 839 aa17.45■□□□□ 0.38
SCAMP2-201ENST00000268099 SWT1Q5T5J6 900 aaKnown RBP17.45■□□□□ 0.38
SCAMP2-201ENST00000268099 KLHL10Q6JEL2 608 aa17.45■□□□□ 0.38
SCAMP2-201ENST00000268099 CYB5R4Q7L1T6 521 aa17.45■□□□□ 0.38
SCAMP2-201ENST00000268099 APPBP2Q92624 585 aa17.45■□□□□ 0.38
SCAMP2-201ENST00000268099 NBPF3Q9H094 633 aa17.45■□□□□ 0.38
SCAMP2-201ENST00000268099 PUS7LQ9H0K6 701 aaKnown RBP17.45■□□□□ 0.38
SCAMP2-201ENST00000268099 ITIH6Q6UXX5 1313 aa17.45■□□□□ 0.38
SCAMP2-201ENST00000268099 EYA2O00167 538 aa17.45■□□□□ 0.38
SCAMP2-201ENST00000268099 SHOX2O60902 331 aaPredicted RBP17.45■□□□□ 0.38
SCAMP2-201ENST00000268099 MCM3P25205 808 aa17.45■□□□□ 0.38
SCAMP2-201ENST00000268099 E2F4Q16254 413 aa17.45■□□□□ 0.38
SCAMP2-201ENST00000268099 CT47A1Q5JQC4 288 aaPredicted RBP17.45■□□□□ 0.38
SCAMP2-201ENST00000268099 NKX2-3Q8TAU0 364 aa17.45■□□□□ 0.38
SCAMP2-201ENST00000268099 ZNF496Q96IT1 587 aaPredicted RBP17.45■□□□□ 0.38
SCAMP2-201ENST00000268099 RNF216Q9NWF9 866 aaPredicted RBP17.45■□□□□ 0.38
SCAMP2-201ENST00000268099 MYH7P12883 1935 aa17.45■□□□□ 0.38
SCAMP2-201ENST00000268099 UBE2Q2LH0YL09 131 aa17.44■□□□□ 0.38
SCAMP2-201ENST00000268099 CUL4BQ13620 913 aa17.44■□□□□ 0.38
SCAMP2-201ENST00000268099 SKIDA1Q1XH10 827 aa17.44■□□□□ 0.38
SCAMP2-201ENST00000268099 TEX2Q8IWB9 1127 aa17.44■□□□□ 0.38
SCAMP2-201ENST00000268099 SENP2Q9HC62 589 aa17.44■□□□□ 0.38
SCAMP2-201ENST00000268099 TMEM94Q12767 1356 aa17.44■□□□□ 0.38
SCAMP2-201ENST00000268099 GPAA1O43292 621 aa17.44■□□□□ 0.38
SCAMP2-201ENST00000268099 ZBTB43O43298 467 aa17.44■□□□□ 0.38
SCAMP2-201ENST00000268099 CD44P16070 742 aaKnown RBP17.44■□□□□ 0.38
SCAMP2-201ENST00000268099 STIM1Q13586 685 aa17.44■□□□□ 0.38
SCAMP2-201ENST00000268099 ZNF579Q8NAF0 562 aaKnown RBP17.44■□□□□ 0.38
SCAMP2-201ENST00000268099 COG1Q8WTW3 980 aa17.44■□□□□ 0.38
SCAMP2-201ENST00000268099 RIN2Q8WYP3 895 aaPredicted RBP17.44■□□□□ 0.38
SCAMP2-201ENST00000268099 SLC52A2Q9HAB3 445 aa17.44■□□□□ 0.38
SCAMP2-201ENST00000268099 SCN11AQ9UI33 1791 aa17.44■□□□□ 0.38
SCAMP2-201ENST00000268099 BTBD18B2RXH4 712 aa17.43■□□□□ 0.38
SCAMP2-201ENST00000268099 EXOC5O00471 708 aa17.43■□□□□ 0.38
SCAMP2-201ENST00000268099 SEMA3EO15041 775 aa17.43■□□□□ 0.38
SCAMP2-201ENST00000268099 KCNA6P17658 529 aa17.43■□□□□ 0.38
SCAMP2-201ENST00000268099 CYP26C1Q6V0L0 522 aa17.43■□□□□ 0.38
SCAMP2-201ENST00000268099 TRAPPC11Q7Z392 1133 aa17.43■□□□□ 0.38
SCAMP2-201ENST00000268099 TBC1D10CQ8IV04 446 aa17.43■□□□□ 0.38
SCAMP2-201ENST00000268099 ZNF594Q96JF6 807 aaPredicted RBP17.43■□□□□ 0.38
SCAMP2-201ENST00000268099 ABHD10Q9NUJ1 306 aa17.43■□□□□ 0.38
SCAMP2-201ENST00000268099 H7C1W4 665 aa17.43■□□□□ 0.38
SCAMP2-201ENST00000268099 KDM6AO15550 1401 aaPredicted RBP17.43■□□□□ 0.38
SCAMP2-201ENST00000268099 ERLIN2O94905 339 aa17.43■□□□□ 0.38
SCAMP2-201ENST00000268099 CEP89Q96ST8 783 aa17.43■□□□□ 0.38
SCAMP2-201ENST00000268099 SLF1Q9BQI6 1058 aa17.43■□□□□ 0.38
SCAMP2-201ENST00000268099 SLC26A6Q9BXS9 759 aa17.43■□□□□ 0.38
SCAMP2-201ENST00000268099 LAMB4A4D0S4 1761 aa17.43■□□□□ 0.38
SCAMP2-201ENST00000268099 WDR17Q8IZU2 1322 aa17.42■□□□□ 0.38
SCAMP2-201ENST00000268099 GOLGA8AA7E2F4 631 aa17.42■□□□□ 0.38
SCAMP2-201ENST00000268099 GGCXP38435 758 aa17.42■□□□□ 0.38
SCAMP2-201ENST00000268099 CCDC91Q7Z6B0 441 aa17.42■□□□□ 0.38
SCAMP2-201ENST00000268099 FAM217BQ9NTX9 383 aaPredicted RBP17.42■□□□□ 0.38
SCAMP2-201ENST00000268099 CAMTA1Q9Y6Y1 1673 aa17.42■□□□□ 0.38
SCAMP2-201ENST00000268099 STK36Q9NRP7 1315 aa17.42■□□□□ 0.38
SCAMP2-201ENST00000268099 SAFBQ15424 915 aaKnown RBP eCLIP17.42■□□□□ 0.38
SCAMP2-201ENST00000268099 RILPL1Q5EBL4 403 aa17.42■□□□□ 0.38
SCAMP2-201ENST00000268099 USP49Q70CQ1 688 aa17.42■□□□□ 0.38
SCAMP2-201ENST00000268099 GPATCH11Q8N954 259 aa17.42■□□□□ 0.38
SCAMP2-201ENST00000268099 PLBD2Q8NHP8 589 aa17.42■□□□□ 0.38
SCAMP2-201ENST00000268099 KAT2BQ92831 832 aa17.42■□□□□ 0.38
SCAMP2-201ENST00000268099 PARP4Q9UKK3 1724 aaKnown RBP17.41■□□□□ 0.38
SCAMP2-201ENST00000268099 TARSL2A2RTX5 802 aaKnown RBP17.41■□□□□ 0.38
SCAMP2-201ENST00000268099 MMP1P03956 469 aa17.41■□□□□ 0.38
SCAMP2-201ENST00000268099 SNRPA1P09661 255 aaKnown RBP17.41■□□□□ 0.38
SCAMP2-201ENST00000268099 CCT5P48643 541 aa17.41■□□□□ 0.38
SCAMP2-201ENST00000268099 LIG3P49916 1009 aa17.41■□□□□ 0.38
SCAMP2-201ENST00000268099 SSRP1Q08945 709 aaKnown RBP17.41■□□□□ 0.38
SCAMP2-201ENST00000268099 NFXL1Q6ZNB6 911 aa17.41■□□□□ 0.38
SCAMP2-201ENST00000268099 DIS3L2Q8IYB7 885 aaKnown RBP17.41■□□□□ 0.38
SCAMP2-201ENST00000268099 FAM76AQ8TAV0 307 aa17.41■□□□□ 0.38
SCAMP2-201ENST00000268099 CRACR2AQ9BSW2 395 aa17.41■□□□□ 0.38
SCAMP2-201ENST00000268099 MYL10Q9BUA6 226 aa17.41■□□□□ 0.38
SCAMP2-201ENST00000268099 KAT14Q9H8E8 782 aa17.41■□□□□ 0.38
SCAMP2-201ENST00000268099 SRPRBQ9Y5M8 271 aaKnown RBP17.41■□□□□ 0.38
SCAMP2-201ENST00000268099 MST1RQ04912 1400 aa17.41■□□□□ 0.38
SCAMP2-201ENST00000268099 CIAO1O76071 339 aa17.41■□□□□ 0.38
SCAMP2-201ENST00000268099 CCT6AP40227 531 aaKnown RBP17.41■□□□□ 0.38
SCAMP2-201ENST00000268099 MMS19Q96T76 1030 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms